CK739461

Overview
NameCK739461
Unique NameCK739461
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length383
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739461 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 1.552e-56
Identity = 107/128 (83.59%), Postives = 121/128 (94.53%), Query Frame = 1
Query:    1 FGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKD-TFRKAIDRTIDLDEETLASISTVAELAGHCCAREPYQRPDMGHVV 381
            FGLVRLAP+ GK SIETR+AGTFGYLAPEYAVTGRVTTKVDV+SFGVILMELITGRK+LDE+Q E+S+HLV+WF+RM+INK+ +F+KAID TIDLDEETLAS+ TVAELAGHCCAREPYQRPDMGH V
Sbjct:  736 FGLVRLAPE-GKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVYSFGVILMELITGRKSLDESQPEESIHLVSWFKRMYINKEASFKKAIDTTIDLDEETLASVHTVAELAGHCCAREPYQRPDMGHAV 862          
BLAST of CK739461 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.117e-21
Identity = 48/127 (37.80%), Postives = 77/127 (60.63%), Query Frame = 1
Query:    1 FGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKAIDRTIDLDEETLASISTVAELAGHCCAREPYQRPDMGHVV 381
            FGL ++ P   K  + TR+ GT+GY AP+YA+TG++T K D++SFGV+L+ELITGRKA+D T++    +LV W R +  ++  F K +D  +   +  +  +     ++  C   +P  RP +  VV
Sbjct:  249 FGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNTKTRKDQNLVGWARPLFKDRRNFPKMVDPLLQ-GQYPVRGLYQALAISAMCVQEQPTMRPVVSDVV 374          
BLAST of CK739461 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 8.043e-21
Identity = 51/127 (40.16%), Postives = 74/127 (58.27%), Query Frame = 1
Query:    1 FGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKAIDRTIDLDEETLASISTVAELAGHCCAREPYQRPDMGHVV 381
            FGL +  P   K  + TR+ GT+GY APEY  TG +TTK DV+S+GV+L+E+++GR+A+D+ +      LV W R +  NK    + ID  +  D+ ++     VA LA  C   E   RP+M  VV
Sbjct:  223 FGLAKDGPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPPGEQKLVEWARPLLANKRKLFRVIDNRLQ-DQYSMEEACKVATLALRCLTFEIKLRPNMNEVV 348          
BLAST of CK739461 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.372e-20
Identity = 51/127 (40.16%), Postives = 74/127 (58.27%), Query Frame = 1
Query:    1 FGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKAIDRTIDLDEETLASISTVAELAGHCCAREPYQRPDMGHVV 381
            FGL +  P   K  + TR+ GT GY APEY  TG +TTK DV+SFGV+L+EL++GR+A+D+ +     +LV W +   +NK    + ID  +  D+ ++     VA L+  C   E   RP+M  VV
Sbjct:  222 FGLAKDGPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNLVEWAKPYLVNKRKIFRVIDNRLQ-DQYSMEEACKVATLSLRCLTTEIKLRPNMSEVV 347          
BLAST of CK739461 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.809e-20
Identity = 52/127 (40.94%), Postives = 72/127 (56.69%), Query Frame = 1
Query:    1 FGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKAIDRTIDLDEETLASISTVAELAGHCCAREPYQRPDMGHVV 381
            FGL +L P   K  + TR+ GT+GY APEYA+TG++T K DV+SFGV+ +ELITGRKA+D        +LV W R +  ++  F K  D  +     T A    +A +A  C   +   RP +  VV
Sbjct:  232 FGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSEMPHGEQNLVAWARPLFNDRRKFIKLADPRLKGRFPTRALYQALA-VASMCIQEQAATRPLIADVV 357          
BLAST of CK739461 vs. ExPASy Swiss-Prot
Match: PTI1_SOLLC (Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 3.379e-19
Identity = 53/127 (41.73%), Postives = 76/127 (59.84%), Query Frame = 1
Query:    1 FGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKAIDRTIDLDEETLASISTVAELAGHCCAREPYQRPDMGHVV 381
            F L   APD       TR+ GTFGY APEYA+TG++++K DV+SFGV+L+EL+TGRK +D T       LVTW     +++D  ++ +D  ++ D    A I+ +A +A  C   E   RP+M  VV
Sbjct:  217 FDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTW-ATPRLSEDKVKQCVDARLNTDYPPKA-IAKMAAVAALCVQYEADFRPNMSIVV 341          
BLAST of CK739461 vs. ExPASy Swiss-Prot
Match: Y2197_ARATH (Probable protein kinase At2g41970 OS=Arabidopsis thaliana GN=At2g41970 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.832e-19
Identity = 52/127 (40.94%), Postives = 75/127 (59.06%), Query Frame = 1
Query:    1 FGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKAIDRTIDLDEETLASISTVAELAGHCCAREPYQRPDMGHVV 381
            F L   + D       TR+ GTFGY APEYA+TG++T K DV+SFGV+L+EL+TGRK +D T  +    LVTW     +++D  ++ ID  ++ D    A ++ +A +A  C   E   RP+M  VV
Sbjct:  223 FNLTNASSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTW-ATPRLSEDKVKQCIDPKLNNDFPPKA-VAKLAAVAALCVQYEADFRPNMTIVV 347          
BLAST of CK739461 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 8.324e-18
Identity = 46/127 (36.22%), Postives = 73/127 (57.48%), Query Frame = 1
Query:    1 FGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKAIDRTIDLDEETLASISTVAELAGHCCAREPYQRPDMGHVV 381
            FGL +L  ++  H I TR+AGTFGY+APEYA+ G +T K DV+SFG++ +E++ GR    E    ++ +L+ W   +   K+   + +D  +   E       T+ ++A  C + EP +RP M  VV
Sbjct:  769 FGLAKLDEEDSTH-ISTRIAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVHGRSNKIERSKNNTFYLIDWVEVLR-EKNNLLELVDPRLG-SEYNREEAMTMIQIAIMCTSSEPCERPSMSEVV 892          
BLAST of CK739461 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 8.324e-18
Identity = 48/127 (37.80%), Postives = 70/127 (55.12%), Query Frame = 1
Query:    1 FGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKAIDRTIDLDEETLASISTVAELAGHCCAREPYQRPDMGHVV 381
            FGL R  P      + TR+ GT GY APEY  TG ++ K DV+SFGV+L+EL++GR+A+D+ Q     +LV W R    NK    + +D  +   + +L     +A LA  C + +   RP M  +V
Sbjct:  222 FGLARDGPMGDNSHVSTRVMGTQGYAAPEYLATGHLSVKSDVYSFGVVLLELLSGRRAIDKNQPVGEHNLVDWARPYLTNKRRLLRVMDPRLQ-GQYSLTRALKIAVLALDCISIDAKSRPTMNEIV 347          
BLAST of CK739461 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.854e-17
Identity = 47/127 (37.01%), Postives = 70/127 (55.12%), Query Frame = 1
Query:    1 FGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKAIDRTIDLDEETLASISTVAELAGHCCAREPYQRPDMGHVV 381
            FGL R  P   +  + TR+ GTFGY APEY  TG +  + DV+SFGV+L+EL+ GR+ALD  +     +LV W R    ++      +D  ++   +   ++  +A +A  C + EP  RP M  VV
Sbjct:  216 FGLARDGPMGEQSYVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELLCGRQALDHNRPAKEQNLVDWARPYLTSRRKVLLIVDTRLNSQYKPEGAV-RLASIAVQCLSFEPKSRPTMDQVV 341          
The following BLAST results are available for this feature:
BLAST of CK739461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
TMK1_ARATH1.552e-5683.59Probable receptor protein kinase TMK1 OS=Arabidops... [more]
RLCK7_ARATH2.117e-2137.80Probable serine/threonine-protein kinase RLCKVII O... [more]
APK1B_ARATH8.043e-2140.16Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
APK1A_ARATH1.372e-2040.16Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
PBS1_ARATH6.809e-2040.94Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
PTI1_SOLLC3.379e-1941.73Pto-interacting protein 1 OS=Solanum lycopersicum ... [more]
Y2197_ARATH9.832e-1940.94Probable protein kinase At2g41970 OS=Arabidopsis t... [more]
Y1534_ARATH8.324e-1836.22Probable LRR receptor-like serine/threonine-protei... [more]
NAK_ARATH8.324e-1837.80Probable serine/threonine-protein kinase NAK OS=Ar... [more]
Y3545_ARATH1.854e-1737.01Probable receptor-like protein kinase At3g55450 OS... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_5923 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE56G04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739461 ID=CK739461; Name=CK739461; organism=Citrus sinensis; type=EST; length=383bp
TTTGGATTGGTTCGTCTAGCACCAGATAATGGAAAGCATTCAATTGAGAC
CAGACTAGCTGGAACTTTCGGCTATCTTGCTCCAGAATATGCTGTGACTG
GACGAGTGACTACAAAGGTTGATGTGTTTAGCTTTGGAGTTATTTTAATG
GAGTTAATCACGGGTAGAAAGGCTCTCGATGAAACCCAGTCTGAGGACAG
TGTGCACCTTGTAACATGGTTCCGCAGAATGCATATTAATAAGGACACAT
TCCGGAAGGCAATTGATCGAACAATTGATCTTGATGAAGAAACCCTTGCT
AGTATAAGCACTGTGGCTGAGCTGGCTGGTCACTGCTGCGCAAGGGAGCC
CTACCAGAGGCCTGATATGGGTCATGTCGTTAA
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