CK739463

Overview
NameCK739463
Unique NameCK739463
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length511
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739463 vs. ExPASy Swiss-Prot
Match: A494_ARATH (Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2)

HSP 1 Score: 316.235 bits (809), Expect = 5.396e-86
Identity = 148/170 (87.06%), Postives = 161/170 (94.71%), Query Frame = 2
Query:    2 NFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRVKEKPYWIIKNSWGESWGENGY 511
            +FLATGKLVSLSEQQLVDCDHECDPEE GSCDSGCNGGLMNSAFEYTLK GGLMRE+DYPYTGTD G +CK D+SKI ASV+NFSVVS++EDQIAANL+KNGPLAVAINA YMQTYIGGVSCPYICSRRL+HGVLLVGYGSAG++  R+KEKPYWIIKNSWGESWGENG+
Sbjct:  169 HFLATGKLVSLSEQQLVDCDHECDPEEEGSCDSGCNGGLMNSAFEYTLKTGGLMREKDYPYTGTDGG-SCKLDRSKIVASVSNFSVVSINEDQIAANLIKNGPLAVAINAAYMQTYIGGVSCPYICSRRLNHGVLLVGYGSAGFSQARLKEKPYWIIKNSWGESWGENGF 337          
BLAST of CK739463 vs. ExPASy Swiss-Prot
Match: RD19A_ARATH (Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 9.204e-86
Identity = 148/170 (87.06%), Postives = 158/170 (92.94%), Query Frame = 2
Query:    2 NFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRVKEKPYWIIKNSWGESWGENGY 511
            NFLATGKLVSLSEQQLVDCDHECDPEE  SCDSGCNGGLMNSAFEYTLK GGLM+EEDYPYTG D G  CK DKSKI ASV+NFSV+S+DE+QIAANLVKNGPLAVAINA YMQTYIGGVSCPYIC+RRL+HGVLLVGYG+AGYAP R KEKPYWIIKNSWGE+WGENG+
Sbjct:  172 NFLATGKLVSLSEQQLVDCDHECDPEEADSCDSGCNGGLMNSAFEYTLKTGGLMKEEDYPYTGKD-GKTCKLDKSKIVASVSNFSVISIDEEQIAANLVKNGPLAVAINAGYMQTYIGGVSCPYICTRRLNHGVLLVGYGAAGYAPARFKEKPYWIIKNSWGETWGENGF 340          
BLAST of CK739463 vs. ExPASy Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 5.980e-77
Identity = 132/171 (77.19%), Postives = 155/171 (90.64%), Query Frame = 2
Query:    2 NFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPIRVKEKPYWIIKNSWGESWGENGY 511
            ++LATGKLVSLSEQQLVDCDH CDPE+ GSCDSGCNGGLMN+AFEY L++GG+++E+DY YTG D   +CKFDKSK+ ASV+NFSVV+LDEDQIAANLVKNGPLAVAINA +MQTY+ GVSCPY+C++ RLDHGVLLVG+G   YAPIR+KEKPYWIIKNSWG++WGE GY
Sbjct:  169 HYLATGKLVSLSEQQLVDCDHVCDPEQAGSCDSGCNGGLMNNAFEYLLESGGVVQEKDYAYTGRD--GSCKFDKSKVVASVSNFSVVTLDEDQIAANLVKNGPLAVAINAAWMQTYMSGVSCPYVCAKSRLDHGVLLVGFGKGAYAPIRLKEKPYWIIKNSWGQNWGEQGY 337          
BLAST of CK739463 vs. ExPASy Swiss-Prot
Match: CYSP1_MAIZE (Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 3.876e-76
Identity = 131/170 (77.06%), Postives = 147/170 (86.47%), Query Frame = 2
Query:    2 NFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRVKEKPYWIIKNSWGESWGENGY 511
            ++LATGKL  LSEQQ VDCDHECD  EP SCDSGCNGGLM +AF Y  KAGGL  E+DYPYTG+D    CKFDKSKI ASV NFSVVS+DE QI+ANL+K+GPLA+ INA YMQTYIGGVSCPYIC R LDHGVLLVGYG++G+APIR+K+KPYWIIKNSWGE+WGENGY
Sbjct:  174 HYLATGKLEVLSEQQFVDCDHECDSSEPDSCDSGCNGGLMTTAFSYLQKAGGLESEKDYPYTGSDG--KCKFDKSKIVASVQNFSVVSVDEAQISANLIKHGPLAIGINAAYMQTYIGGVSCPYICGRHLDHGVLLVGYGASGFAPIRLKDKPYWIIKNSWGENWGENGY 341          
BLAST of CK739463 vs. ExPASy Swiss-Prot
Match: CYSP1_DICDI (Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 1.817e-41
Identity = 83/171 (48.54%), Postives = 109/171 (63.74%), Query Frame = 2
Query:    2 NFLATGKLVSLSEQQLVDCDHEC-DPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRVKEKPYWIIKNSWGESWGENGY 511
            +F++  KLVSLSEQ LVDCDHEC + E   +CD GCNGGL  +A+ Y +K GG+  E  YPYT  + G  C F+ + I A ++NF+++  +E  +A  +V  GPLA+A +AV  Q YIGGV         LDHG+L+VGY +     I  K  PYWI+KNSWG  WGE GY
Sbjct:  155 HFISQNKLVSLSEQNLVDCDHECMEYEGEQACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTA-ETGTQCNFNSANIGAKISNFTMIPKNETVMAGYIVSTGPLAIAADAVEWQFYIGGVFDIPCNPNSLDHGILIVGYSAKN--TIFRKNMPYWIVKNSWGADWGEQGY 322          
BLAST of CK739463 vs. ExPASy Swiss-Prot
Match: PAPA5_CARPA (Cysteine proteinase (Fragment) OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 7.395e-35
Identity = 64/69 (92.75%), Postives = 68/69 (98.55%), Query Frame = 2
Query:  305 GPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRVKEKPYWIIKNSWGESWGENGY 511
            GPLAVAINA YMQTYIGGVSCPYICSRRL+HGVLLVGYGSAGYAPIR+KEKPYW+IKNSWGE+WGENGY
Sbjct:    1 GPLAVAINAAYMQTYIGGVSCPYICSRRLNHGVLLVGYGSAGYAPIRLKEKPYWVIKNSWGENWGENGY 69          
BLAST of CK739463 vs. ExPASy Swiss-Prot
Match: CATL_SCHMA (Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 3.107e-33
Identity = 77/172 (44.77%), Postives = 104/172 (60.47%), Query Frame = 2
Query:    5 FLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPY--ICSR-RLDHGVLLVGYGSAGYAPIRVKEKPYWIIKNSWGESWGENGY 511
            F  TGKL+SLSEQQLVDCD           D GCNGGL ++A+E  +K GGLM E++YPY    +   C      +A  + +   ++ DE ++AA L  N  ++V +NA+ +Q Y  G+S P+   CS+  LDH VLLVGYG      +  K +P+WI+KNSWG  WGENGY
Sbjct:  143 FRKTGKLLSLSEQQLVDCD---------GLDDGCNGGLPSNAYESIIKMGGLMLEDNYPYDA--KNEKCHLKTDGVAVYINSSVNLTQDETELAAWLYHNSTISVGMNALLLQFYQHGISHPWWIFCSKYLLDHAVLLVGYG------VSEKNEPFWIVKNSWGVEWGENGY 297          
BLAST of CK739463 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 6.478e-31
Identity = 76/170 (44.71%), Postives = 104/170 (61.18%), Query Frame = 2
Query:   14 TGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPY--ICSRR-LDHGVLLVGYGSAGYAPIRVKEKPYWIIKNSWGESWGENGY 511
            TG+L   SEQ+L+DCD         + DS CNGGLM++A++     GGL  E +YPY    + + C F+++     VA F  +   +E  +   L+ NGP+++ INA  MQ Y GGVS P+  +CS++ LDHGVL+VGYG + Y P   K  PYWI+KNSWG  WGE GY
Sbjct:  435 TGELKEFSEQELLDCD---------TTDSACNGGLMDNAYKAIKDIGGLEYEAEYPYKA--KKNQCHFNRTLSHVQVAGFVDLPKGNETAMQEWLLANGPISIGINANAMQFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSDY-PNFHKTLPYWIVKNSWGPRWGEQGY 592          
BLAST of CK739463 vs. ExPASy Swiss-Prot
Match: CYSP_TRYBB (Cysteine proteinase OS=Trypanosoma brucei brucei PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.215e-30
Identity = 76/173 (43.93%), Postives = 100/173 (57.80%), Query Frame = 2
Query:    8 LATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG--LMREEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRVKEKPYWIIKNSWGESWGENGY 511
            +A   LVSLSEQ LV CD         + DSGCNGGLM++AF + + + G  +  E  YPY +G      C+ +  +I A++ +   +  DED IAA L +NGPLA+A++A     Y GG+  SC    S++LDHGVLLVGY             PYWIIKNSW   WGE+GY
Sbjct:  165 VAGNPLVSLSEQMLVSCD---------TIDSGCNGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIAVDAESFMDYNGGILTSC---TSKQLDHGVLLVGYNDN-------SNPPYWIIKNSWSNMWGEDGY 318          
BLAST of CK739463 vs. ExPASy Swiss-Prot
Match: CATV_NPVAH (Viral cathepsin OS=Adoxophyes honmai nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.222e-29
Identity = 72/165 (43.64%), Postives = 97/165 (58.79%), Query Frame = 2
Query:   23 LVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFS-VVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPIRVKEKPYWIIKNSWGESWGENGY 511
            L++LSEQQL+DCD         S +  C+GGLM++AFE  + AGGLM E DYPY GT     CK D  K A SV++    +  +E+ +   L+  GP+A+AI+A  + TY  G+   + C    L+H VLLVGYG+ G          YW +KNSWG  WGE+GY
Sbjct:  170 LINLSEQQLIDCD---------SANMACDGGLMHTAFEQLMNAGGLMEEIDYPYQGTK--GVCKIDNKKFALSVSSCKRYIFQNEENLKKELITMGPIAMAIDAASISTYSKGII--HFCENLGLNHAVLLVGYGTEGGV-------SYWTLKNSWGSDWGEDGY 314          
The following BLAST results are available for this feature:
BLAST of CK739463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
A494_ARATH5.396e-8687.06Probable cysteine proteinase A494 OS=Arabidopsis t... [more]
RD19A_ARATH9.204e-8687.06Cysteine proteinase RD19a OS=Arabidopsis thaliana ... [more]
CYSP_PEA5.980e-7777.19Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1[more]
CYSP1_MAIZE3.876e-7677.06Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=... [more]
CYSP1_DICDI1.817e-4148.54Cysteine proteinase 1 OS=Dictyostelium discoideum ... [more]
PAPA5_CARPA7.395e-3592.75Cysteine proteinase (Fragment) OS=Carica papaya PE... [more]
CATL_SCHMA3.107e-3344.77Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=... [more]
CPR1_DROME6.478e-3144.71Putative cysteine proteinase CG12163 OS=Drosophila... [more]
CYSP_TRYBB3.215e-3043.93Cysteine proteinase OS=Trypanosoma brucei brucei P... [more]
CATV_NPVAH1.222e-2943.64Viral cathepsin OS=Adoxophyes honmai nucleopolyhed... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_5925 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE56G06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739463 ID=CK739463; Name=CK739463; organism=Citrus sinensis; type=EST; length=511bp
TAACTTCCTGGCAACTGGAAAGCTTGTGAGCCTCAGTGAGCAACAGCTTG
TGGATTGCGATCATGAGTGTGATCCTGAGGAACCAGGTTCTTGTGATTCT
GGATGCAATGGTGGGCTTATGAACAGTGCTTTTGAGTACACACTCAAGGC
TGGTGGGCTTATGCGGGAGGAAGACTATCCTTACACCGGCACTGATCGTG
GCCACGCCTGCAAATTCGATAAGAGTAAGATTGCTGCCTCAGTGGCCAAC
TTCAGTGTTGTCTCCCTTGATGAGGATCAAATTGCTGCCAATCTTGTGAA
AAATGGTCCCCTTGCAGTGGCCATCAATGCCGTGTACATGCAGACATACA
TTGGGGGAGTTTCCTGCCCATACATATGCTCGAGGCGATTGGACCATGGA
GTGTTGCTCGTGGGATACGGGTCAGCTGGCTATGCTCCAATCAGGGTGAA
GGAGAAGCCATACTGGATCATCAAGAATTCATGGGGTGAGAGCTGGGGAG
AGAACGGATAC
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