CK739467
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739467 vs. ExPASy Swiss-Prot
Match: AGO4B_ORYSJ (Protein argonaute 4B OS=Oryza sativa subsp. japonica GN=AGO4B PE=2 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 8.695e-52 Identity = 95/114 (83.33%), Postives = 106/114 (92.98%), Query Frame = 2 Query: 2 RNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFDDLSETSSSQGGMTSAGPVPVPQLPRLQEKVCNSMFFC 343 RNYDFY+CAHAGMIGT+RPTHYHVL DEIGFS D+LQELVHSLSYVYQRSTTAISVVAPICYAHLAA+QVG+F+KF+D+S+ SSSQGG TS G VPVP+LPRL EKV +SMFFC Sbjct: 798 RNYDFYMCAHAGMIGTTRPTHYHVLHDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGTFLKFEDMSDASSSQGGHTSVGSVPVPELPRLHEKVRSSMFFC 911
BLAST of CK739467 vs. ExPASy Swiss-Prot
Match: AGO4A_ORYSJ (Protein argonaute 4A OS=Oryza sativa subsp. japonica GN=AGO4A PE=2 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 1.063e-49 Identity = 92/114 (80.70%), Postives = 103/114 (90.35%), Query Frame = 2 Query: 2 RNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFDDLSETSSSQGGMTSAGPVPVPQLPRLQEKVCNSMFFC 343 RN DFY+CAHAGMIGT+RPTHYH+L DEIGFS+D+LQELVHSLSYVYQRSTTAISVVAPICYAHLAA+QV F+KFD++SETSSS GG TSAG PVP+LPRL KV +SMFFC Sbjct: 791 RNNDFYMCAHAGMIGTTRPTHYHILHDEIGFSADDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVSQFIKFDEMSETSSSHGGHTSAGSAPVPELPRLHNKVRSSMFFC 904
BLAST of CK739467 vs. ExPASy Swiss-Prot
Match: AGO16_ORYSJ (Protein argonaute 16 OS=Oryza sativa subsp. japonica GN=AGO16 PE=2 SV=2) HSP 1 Score: 172.94 bits (437), Expect = 7.378e-43 Identity = 82/114 (71.93%), Postives = 95/114 (83.33%), Query Frame = 2 Query: 2 RNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFDDLSETSSSQGGMTSAGPVPVPQLPRLQEKVCNSMFFC 343 R YDFY+ AHAG IGTSRPTHYHVL DEIGF D++Q+LV SLSYVYQRSTTAISVVAPICYAHLAA+Q+G FMKF++ +ETSS GG+ S+ VP+LPRL VC+SMFFC Sbjct: 770 RQYDFYMYAHAGPIGTSRPTHYHVLLDEIGFLPDDVQKLVLSLSYVYQRSTTAISVVAPICYAHLAAAQMGQFMKFEEFAETSSGSGGVPSSSGAVVPELPRLHADVCSSMFFC 883
BLAST of CK739467 vs. ExPASy Swiss-Prot
Match: AGO15_ORYSJ (Protein argonaute 15 OS=Oryza sativa subsp. japonica GN=AGO15 PE=2 SV=2) HSP 1 Score: 161.384 bits (407), Expect = 2.221e-39 Identity = 79/114 (69.30%), Postives = 89/114 (78.07%), Query Frame = 2 Query: 2 RNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFDDLSETSSSQGGMTSAGPVPVPQLPRLQEKVCNSMFFC 343 RN DFY+CAHAGMIGT+RPTHYHVL DE F+ D+LQELVH+LSYVYQRSTTAIS VAPICYAHLAA+QV F++ DD + S GG A P PVP+LPRL V SMFFC Sbjct: 779 RNCDFYMCAHAGMIGTTRPTHYHVLHDENNFTPDDLQELVHNLSYVYQRSTTAISGVAPICYAHLAAAQVSQFVRLDDAASEGSGDGG---APPRPVPELPRLHPDVRQSMFFC 889
BLAST of CK739467 vs. ExPASy Swiss-Prot
Match: MEL1_ORYSJ (Protein argonaute MEL1 OS=Oryza sativa subsp. japonica GN=MEL1 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 2.384e-25 Identity = 58/115 (50.43%), Postives = 77/115 (66.96%), Query Frame = 2 Query: 8 YDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMK---FDDLSETSSSQGGMTSAGPVPVPQLPRLQEKVCNSMFFC 343 +DFYLC+HAG+ GTSRPTHYHVL+DE F++D LQ L ++L Y Y R T A+SVV P YAHLAA + +++ D S SS + GPV V QLP+++E V + MF+C Sbjct: 944 FDFYLCSHAGIQGTSRPTHYHVLYDENHFTADALQSLTNNLCYTYARCTRAVSVVPPAYYAHLAAFRARYYVEGESSDGGSTPGSSGQAVAREGPVEVRQLPKIKENVKDVMFYC 1058
BLAST of CK739467 vs. ExPASy Swiss-Prot
Match: PNH1_ORYSJ (Protein argonaute PNH1 OS=Oryza sativa subsp. japonica GN=PHN1 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 4.497e-24 Identity = 53/112 (47.32%), Postives = 74/112 (66.07%), Query Frame = 2 Query: 8 YDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFDDLSETSSSQGGMTSAGPVPVPQLPRLQEKVCNSMFFC 343 +DFYLC+HAG+ GTSRP HYHVL+DE F++DE+Q L ++L Y Y R T ++SVV P YAHLAA + +M+ ++SE ++ T V LP ++EKV MF+C Sbjct: 869 FDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYME-PEMSENQTTSKSSTGTNGTSVKPLPAVKEKVKRVMFYC 979
BLAST of CK739467 vs. ExPASy Swiss-Prot
Match: AGO11_ORYSJ (Protein argonaute 11 OS=Oryza sativa subsp. japonica GN=AGO11 PE=2 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 5.873e-24 Identity = 54/117 (46.15%), Postives = 75/117 (64.10%), Query Frame = 2 Query: 8 YDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFDDL-----SETSSSQGGMTSAGPVPVPQLPRLQEKVCNSMFFC 343 +DFYLC+H+G+ GTS PTHY+VLFDE FS+D LQ L + L Y Y R T ++S+V P+ YAHLAAS+ +++ L S S++ G + VPV LP ++E V MF+C Sbjct: 776 FDFYLCSHSGIQGTSHPTHYYVLFDENNFSADALQTLTYHLCYTYARCTRSVSIVPPVYYAHLAASRARHYLEEGSLPDHGSSSASAAGGSRRNDRGVPVKPLPEIKENVKQFMFYC 892
BLAST of CK739467 vs. ExPASy Swiss-Prot
Match: AGO1B_ORYSJ (Protein argonaute 1B OS=Oryza sativa subsp. japonica GN=AGO1B PE=2 SV=3) HSP 1 Score: 108.227 bits (269), Expect = 2.232e-23 Identity = 57/124 (45.97%), Postives = 75/124 (60.48%), Query Frame = 2 Query: 8 YDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFDDLSETSSSQGGMTS------------AGPVPVPQLPRLQEKVCNSMFFC 343 +DFYLC+HAG+ GTSRP HYHVL+DE F++DELQ L ++L Y Y R T ++S+V P YAHLAA + +M+ + S + G TS AG V V LP L+E V MF+C Sbjct: 995 FDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGAATSRGLPPGVRSARVAGNVAVRPLPALKENVKRVMFYC 1118
BLAST of CK739467 vs. ExPASy Swiss-Prot
Match: AGO12_ORYSJ (Protein argonaute 12 OS=Oryza sativa subsp. japonica GN=AGO12 PE=2 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 2.915e-23 Identity = 55/112 (49.11%), Postives = 72/112 (64.29%), Query Frame = 2 Query: 8 YDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFDDLSETSSSQGGMTSAGPVPVPQLPRLQEKVCNSMFFC 343 +DFYLC+H+G+ GTSRPTHYHVL DE GF +D LQ L ++LSY Y R T A+S+V P YAHL A + +M+ D+ S+ SS T P LP ++E V MF+C Sbjct: 940 FDFYLCSHSGIKGTSRPTHYHVLLDENGFKADTLQTLTYNLSYTYARCTRAVSIVPPAYYAHLGAFRARYYME-DEHSDQGSSSSVTTRTDRSTKP-LPEIKENVKRFMFYC 1049
BLAST of CK739467 vs. ExPASy Swiss-Prot
Match: AGO14_ORYSJ (Protein argonaute 14 OS=Oryza sativa subsp. japonica GN=AGO14 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 3.807e-23 Identity = 57/116 (49.14%), Postives = 77/116 (66.38%), Query Frame = 2 Query: 8 YDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFDDLSETSS--SQGGMTSAG--PVPVPQLPRLQEKVCNSMFFC 343 +DFYLC+HAG+ GTSRPTHYHVL DE FS+D+LQ L ++L Y Y R T ++SVV P YAHLAA + + + + SS S G +AG P V +LP+++E V + MF+C Sbjct: 937 FDFYLCSHAGIQGTSRPTHYHVLHDENRFSADQLQMLTYNLCYTYARCTRSVSVVPPAYYAHLAAFRARYYDEPPAMDGASSVGSGGNQAAAGGQPPAVRRLPQIKENVKDVMFYC 1052 The following BLAST results are available for this feature:
BLAST of CK739467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739467 ID=CK739467; Name=CK739467; organism=Citrus sinensis; type=EST; length=511bpback to top |