CK739474

Overview
NameCK739474
Unique NameCK739474
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length541
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739474 vs. ExPASy Swiss-Prot
Match: IAA14_ARATH (Auxin-responsive protein IAA14 OS=Arabidopsis thaliana GN=IAA14 PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 4.838e-35
Identity = 74/138 (53.62%), Postives = 81/138 (58.70%), Query Frame = 1
Query:   85 MDFKETELCLGLPGGGNNKKDEAAALELTPTPKASNKRGFCETAVIDLKLNLQS-KESSVDLNENFKNPPSNNKNHDKDPAKPSANKAQVVGWPPVRSYRKNAMAE---------------TAAFVKVCMDGAPYLRK 450
            M+ KETELCLGLPGG    +  A +          NKRGF ET  +DLKLNLQS K+  VDLN N        K   KDP+KP A KAQVVGWPPVR+YRKN MA                T AFVKV MDGAPYLRK
Sbjct:    1 MNLKETELCLGLPGGTETVESPAKS-------GVGNKRGFSET--VDLKLNLQSNKQGHVDLNTN---GAPKEKTFLKDPSKPPA-KAQVVGWPPVRNYRKNVMANQKSGEAEEAMSSGGGTVAFVKVSMDGAPYLRK 125          

HSP 2 Score: 53.1434 bits (126), Expect = 4.838e-35
Identity = 24/31 (77.42%), Postives = 29/31 (93.55%), Query Frame = 3
Query:  447 QVDLKTYKSYQELSDALAKMFSSFTMGNYGS 539
            +VDLK Y SY++LSDALAKMFSSFTMG+YG+
Sbjct:  125 KVDLKMYTSYKDLSDALAKMFSSFTMGSYGA 155          
BLAST of CK739474 vs. ExPASy Swiss-Prot
Match: IAA7_ARATH (Auxin-responsive protein IAA7 OS=Arabidopsis thaliana GN=IAA7 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.152e-33
Identity = 74/150 (49.33%), Postives = 80/150 (53.33%), Query Frame = 1
Query:   73 IGLKMDFKETELCLGLPGGGNNKKDEAAALELTPTPKASNKRGFCETAVIDLKLNLQS-KESSVDLNENFKNPPSNNKNHDKDPAKPSANKAQVVGWPPVRSYRKNAM-----------------------AETAAFVKVCMDGAPYLRK 450
            IG  M+ K TELCLGLPGG       A A+E        +KRGF ET  +DL LNLQS KE SVDL      P    K   KDP+KP A KAQVVGWPPVR+YRKN M                       A  A  VKV MDGAPYLRK
Sbjct:    2 IGQLMNLKATELCLGLPGG-------AEAVESPAKSAVGSKRGFSET--VDLMLNLQSNKEGSVDLKNVSAVP--KEKTTLKDPSKPPA-KAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNFGGGAAGAGLVKVSMDGAPYLRK 139          

HSP 2 Score: 58.9214 bits (141), Expect = 1.152e-33
Identity = 27/31 (87.10%), Postives = 30/31 (96.77%), Query Frame = 3
Query:  447 QVDLKTYKSYQELSDALAKMFSSFTMGNYGS 539
            +VDLK YKSYQ+LSDALAKMFSSFTMGNYG+
Sbjct:  139 KVDLKMYKSYQDLSDALAKMFSSFTMGNYGA 169          
BLAST of CK739474 vs. ExPASy Swiss-Prot
Match: IAA17_ARATH (Auxin-responsive protein IAA17 OS=Arabidopsis thaliana GN=IAA17 PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 2.960e-31
Identity = 67/136 (49.26%), Postives = 81/136 (59.56%), Query Frame = 1
Query:   79 LKMDFKETELCLGLPGGGNNKKDEAAALELTPTPKASNKRGFCETAVIDLKLNLQSKESSVDLNENFKNPPSNNKNHD---KDPAKPSANKAQVVGWPPVRSYRKNAMA---------ETAAFVKVCMDGAPYLRK 450
            ++++ +ETELCLGLPGG             T  P   NKRGF ET  +DLKLNL ++ ++ + +        ++K      KDPAKP A KAQVVGWPPVRSYRKN M          E AAFVKV MDGAPYLRK
Sbjct:    5 VELNLRETELCLGLPGGD------------TVAPVTGNKRGFSET--VDLKLNLNNEPANKEGSTTHDVVTFDSKEKSACPKDPAKPPA-KAQVVGWPPVRSYRKNVMVSCQKSSGGPEAAAFVKVSMDGAPYLRK 125          

HSP 2 Score: 46.9802 bits (110), Expect = 2.960e-31
Identity = 20/30 (66.67%), Postives = 26/30 (86.67%), Query Frame = 3
Query:  447 QVDLKTYKSYQELSDALAKMFSSFTMGNYG 536
            ++DL+ YKSY ELS+AL+ MFSSFTMG +G
Sbjct:  125 KIDLRMYKSYDELSNALSNMFSSFTMGKHG 154          
BLAST of CK739474 vs. ExPASy Swiss-Prot
Match: AUX28_SOYBN (Auxin-induced protein AUX28 OS=Glycine max GN=AUX28 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.699e-27
Identity = 64/151 (42.38%), Postives = 74/151 (49.01%), Query Frame = 1
Query:   85 MDFKETELCLGLPGGGNNKKDEAAALELTPTPKASNKRGFCET---------AVIDLKLNLQSKESSV------DLNENFKNPPSNNKNHDKDPAKPSANKAQVVGWPPVRSYRKNAMA--------------ETAAFVKVCMDGAPYLRK 450
            M F+ETEL LGLPG G  ++                KRGF ET           +DL LNL SKE++       D  +  K  P        DPAKP A K QVVGWPPVRS+RKN +A                A+FVKV MDGAPYLRK
Sbjct:    1 MGFEETELRLGLPGNGGTEE------------VLIRKRGFSETETGHEDESATTVDLMLNLSSKEAATTAAAAADPTDKHKTLPKEKTLLPADPAKPPA-KTQVVGWPPVRSFRKNMLAVQKSVGEESEKNSSPNASFVKVSMDGAPYLRK 138          

HSP 2 Score: 48.521 bits (114), Expect = 6.699e-27
Identity = 22/28 (78.57%), Postives = 25/28 (89.29%), Query Frame = 3
Query:  447 QVDLKTYKSYQELSDALAKMFSSFTMGN 530
            +VDLK YKSY+ELSD+L KMFSSFT GN
Sbjct:  138 KVDLKMYKSYRELSDSLGKMFSSFTFGN 165          
BLAST of CK739474 vs. ExPASy Swiss-Prot
Match: IAA30_ORYSJ (Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica GN=IAA30 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.132e-26
Identity = 69/176 (39.20%), Postives = 83/176 (47.16%), Query Frame = 1
Query:   91 FKETELCLGLPGGGNNKKDEAAALELTPTPKASNKRGFCETAVIDLKLNLQSKESSVDLNENFKNPPSNNK----------NHDK-------------------------DPAKPSANKAQVVGWPPVRSYRKN---------------------AMAETAAFVKVCMDGAPYLRK 450
            F+ TEL LGLPGGG +    AAA        +S KRGF ET  IDLKL L+   ++VD +++ +   ++++          N D                          DP KP A KAQVVGWPPVRSYRKN                     A A  AAFVKV MDGAPYLRK
Sbjct:    7 FEATELRLGLPGGGGDGDAAAAAAR-----SSSGKRGFAET--IDLKLKLEPAAAAVDDDDDKEEAAADDREKKVDIVGADNDDASPPAAAAAGGMKRSPSQSSVVTAAADPEKPRAPKAQVVGWPPVRSYRKNILAVQADKGKDAADGGGDKSGAGAAAAAFVKVSMDGAPYLRK 175          

HSP 2 Score: 48.9062 bits (115), Expect = 1.132e-26
Identity = 24/31 (77.42%), Postives = 26/31 (83.87%), Query Frame = 3
Query:  447 QVDLKTYKSYQELSDALAKMFSSFTMGNYGS 539
            +VDLK YKSY ELS AL KMFSSFT+GN GS
Sbjct:  175 KVDLKMYKSYLELSKALEKMFSSFTIGNCGS 205          
BLAST of CK739474 vs. ExPASy Swiss-Prot
Match: IAA11_ORYSJ (Auxin-responsive protein IAA11 OS=Oryza sativa subsp. japonica GN=IAA11 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 2.880e-24
Identity = 67/148 (45.27%), Postives = 78/148 (52.70%), Query Frame = 1
Query:   85 MDFKETELCLGLPGGGNNKKDEAAALELTPTPKASNKRGFCETAVIDLKLNLQ---------------------SKESSVDLNENFKNPPSNNK--NHDKDPAKPSANKAQVVGWPPVRSYRKNAMAE---TAAFVKVCMDGAPYLRK 450
            + F ETEL LGLPG G     E AA       ++S KRGF ET  IDLKL LQ                     +  ++ D   + K   S +     + DP KP A KAQVVGWPPVRS+RKN +AE    AA VKV MDGAPYLRK
Sbjct:    4 LGFDETELRLGLPGAG-----ELAA-------RSSGKRGFAET--IDLKLKLQPAAPAAVSGEEGAQEDKEDADAAAAAADEKMSMKRSASQSSVVTAEPDPDKPRAPKAQVVGWPPVRSFRKNVLAEKCKAAALVKVSMDGAPYLRK 137          

HSP 2 Score: 37.7354 bits (86), Expect = 2.880e-24
Identity = 17/31 (54.84%), Postives = 22/31 (70.97%), Query Frame = 3
Query:  447 QVDLKTYKSYQELSDALAKMFSSFTMGNYGS 539
            ++D+  YKSY ELS A   MF+SFT+G  GS
Sbjct:  137 KIDVAMYKSYPELSMAFQNMFTSFTIGKCGS 167          
BLAST of CK739474 vs. ExPASy Swiss-Prot
Match: IAA17_ORYSJ (Auxin-responsive protein IAA17 OS=Oryza sativa subsp. japonica GN=IAA17 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 2.212e-20
Identity = 56/142 (39.44%), Postives = 69/142 (48.59%), Query Frame = 1
Query:   88 DFKETELCLGLPGGGN-NKKDEAAALELTPTPKASNKRGFCETA----VIDLKLNLQSKESSVDLNENFKNPPSNNKNHDKDPAKPSANKAQVVGWPPVRSYRKNAMA----------------ETAAFVKVCMDGAPYLRK 450
            D K TEL LGLPG  + ++   AA L+L P  K + KRGF + A              K       E  ++    +K     P  P+A KAQVVGWPP+RSYRKN MA                +   +VKV MDGAPYLRK
Sbjct:   27 DLKGTELRLGLPGSHSPDRSPPAATLDLLPAAKGA-KRGFSDEARPLPASAAAAAAAGKGKKAAAGEEDEDAEEEDKKVAAAPQAPAA-KAQVVGWPPIRSYRKNTMATNQLKSSKEDAEAKQGQGFLYVKVSMDGAPYLRK 166          

HSP 2 Score: 41.2022 bits (95), Expect = 2.212e-20
Identity = 19/30 (63.33%), Postives = 23/30 (76.67%), Query Frame = 3
Query:  447 QVDLKTYKSYQELSDALAKMFSSFTMGNYG 536
            +VDLKTYK+Y++LS AL KMF  FT G  G
Sbjct:  166 KVDLKTYKNYKDLSTALEKMFIGFTTGKDG 195          
BLAST of CK739474 vs. ExPASy Swiss-Prot
Match: IAA9_ARATH (Auxin-responsive protein IAA9 OS=Arabidopsis thaliana GN=IAA9 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 8.182e-20
Identity = 58/171 (33.92%), Postives = 77/171 (45.03%), Query Frame = 1
Query:   85 MDFKETELCLGLPGGGNN------------KKDEAAALELTPTPK-----------ASNKRGFCETA--VIDLKLNLQSKES----------SVDLNENFKNPPSNNKNHDKDPAKPSANKAQVVGWPPVRSYRKNAMAET--------------AAFVKVCMDGAPYLRK 450
            +  K TEL LGLPG  +             K DE     L P+             + NKRGF +T     + K ++ ++++          SV   +  +N P    +   + + P A KAQ+VGWPPVRSYRKN +A T              A FVKV MDGAPYLRK
Sbjct:   61 ISLKATELTLGLPGSQSPARDTELNLLSPAKLDEKPFFPLLPSKDEICSSSQKNNASGNKRGFSDTMDQFAEAKSSVYTEKNWMFPEAAATQSVTKKDVPQNIPKGQSSTTNNSSSPPAAKAQIVGWPPVRSYRKNTLATTCKNSDEVDGRPGSGALFVKVSMDGAPYLRK 231          

HSP 2 Score: 41.2022 bits (95), Expect = 8.182e-20
Identity = 18/31 (58.06%), Postives = 25/31 (80.65%), Query Frame = 3
Query:  447 QVDLKTYKSYQELSDALAKMFSSFTMGNYGS 539
            +VDL++Y +Y ELS AL KMF++FT+G  GS
Sbjct:  231 KVDLRSYTNYGELSSALEKMFTTFTLGQCGS 261          
BLAST of CK739474 vs. ExPASy Swiss-Prot
Match: IAA27_ARATH (Auxin-responsive protein IAA27 OS=Arabidopsis thaliana GN=IAA27 PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 2.347e-19
Identity = 53/163 (32.52%), Postives = 74/163 (45.40%), Query Frame = 1
Query:   85 MDFKETELCLGLPGGGNNKKDEAAALELTPT--PKASNKRGFCE---------------TAVIDLKLNLQSKESSV-DLNENFKNPPSNNKNHDKDPAKPSANKAQVVGWPPVRSYRKNAMAETAA-----------------------FVKVCMDGAPYLRK 450
            ++FK TEL LGLPG  + ++ ++  L L  +  P +  KR F +               TA  D+      + S V D        P+      K  A   A+KAQVVGWPP+RS+RKN+MA + +                       +VKV M+GAPYLRK
Sbjct:   38 LNFKATELRLGLPGSESPERVDSRFLALNKSSCPVSGAKRVFSDAINDSNKWVFSPGSTTATGDVGSGSGPRTSVVKDGKSTTFTKPAVPVKEKKSSATAPASKAQVVGWPPIRSFRKNSMASSQSQKPGNNSETEEAEAKSGPEQPCLYVKVSMEGAPYLRK 200          

HSP 2 Score: 48.9062 bits (115), Expect = 2.347e-19
Identity = 22/31 (70.97%), Postives = 26/31 (83.87%), Query Frame = 3
Query:  447 QVDLKTYKSYQELSDALAKMFSSFTMGNYGS 539
            ++DLKTYKSY ELS AL KMFS FT+G +GS
Sbjct:  200 KIDLKTYKSYLELSSALEKMFSCFTIGQFGS 230          
BLAST of CK739474 vs. ExPASy Swiss-Prot
Match: IAA21_ORYSJ (Auxin-responsive protein IAA21 OS=Oryza sativa subsp. japonica GN=IAA21 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 5.180e-19
Identity = 53/144 (36.81%), Postives = 67/144 (46.53%), Query Frame = 1
Query:  100 TELCLGLPG--------GGNNKKDEAAALELTPTPKASNKRGFCETAVIDLKLNLQSKESSVDLNENFKNPPSNNKNHDKDPAKPSANKAQVVGWPPVRSYRKNAMAET-------------------AAFVKVCMDGAPYLRK 450
            TEL LGLPG        GG     +AA L L   PK   KRGF + A++      + + +     +         +  +K  A+  A KAQVVGWPP+RSYRKN MA +                     +VKV MDGAPYLRK
Sbjct:   22 TELRLGLPGTAEEAESEGGGGGGTDAAPLTLELLPKGGAKRGFAD-AIVGGPAGQRREAAG---GKAAAAAAEAEEEEEKKKAQAPAAKAQVVGWPPIRSYRKNTMAMSQPALKGKDDGEAKQAPASGCLYVKVSMDGAPYLRK 161          

HSP 2 Score: 40.817 bits (94), Expect = 5.180e-19
Identity = 19/28 (67.86%), Postives = 24/28 (85.71%), Query Frame = 3
Query:  447 QVDLKTYKSYQELSDALAKMFSSFTMGN 530
            +VDLK YK+Y+ELS AL KMFS FT+G+
Sbjct:  161 KVDLKMYKNYKELSLALEKMFSCFTVGH 188          
The following BLAST results are available for this feature:
BLAST of CK739474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
IAA14_ARATH4.838e-3553.62Auxin-responsive protein IAA14 OS=Arabidopsis thal... [more]
IAA7_ARATH1.152e-3349.33Auxin-responsive protein IAA7 OS=Arabidopsis thali... [more]
IAA17_ARATH2.960e-3149.26Auxin-responsive protein IAA17 OS=Arabidopsis thal... [more]
AUX28_SOYBN6.699e-2742.38Auxin-induced protein AUX28 OS=Glycine max GN=AUX2... [more]
IAA30_ORYSJ1.132e-2639.20Auxin-responsive protein IAA30 OS=Oryza sativa sub... [more]
IAA11_ORYSJ2.880e-2445.27Auxin-responsive protein IAA11 OS=Oryza sativa sub... [more]
IAA17_ORYSJ2.212e-2039.44Auxin-responsive protein IAA17 OS=Oryza sativa sub... [more]
IAA9_ARATH8.182e-2033.92Auxin-responsive protein IAA9 OS=Arabidopsis thali... [more]
IAA27_ARATH2.347e-1932.52Auxin-responsive protein IAA27 OS=Arabidopsis thal... [more]
IAA21_ORYSJ5.180e-1936.81Auxin-responsive protein IAA21 OS=Oryza sativa sub... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_5937 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE56H06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739474 ID=CK739474; Name=CK739474; organism=Citrus sinensis; type=EST; length=541bp
GAAAGAAAGAAAGAAAGAAAGAACGAAAAAGAAAATCTGTAAAGGAGTTG
TTTGATAATTTGAATGGAAGCTATTGGCCTGAAAATGGACTTCAAAGAGA
CTGAACTTTGCCTTGGATTGCCCGGCGGTGGCAACAACAAAAAAGATGAA
GCTGCTGCGTTAGAATTAACTCCAACTCCAAAGGCTAGCAACAAAAGAGG
CTTCTGTGAGACTGCCGTAATTGATTTGAAACTCAATCTTCAGTCTAAGG
AATCGTCAGTGGATCTGAATGAAAATTTCAAGAATCCTCCTTCCAACAAC
AAGAATCATGATAAGGATCCCGCAAAGCCATCCGCCAATAAGGCACAAGT
TGTGGGGTGGCCACCAGTGCGATCCTATAGGAAGAATGCTATGGCTGAAA
CGGCAGCATTTGTGAAGGTTTGCATGGACGGGGCTCCATATCTTCGCAAG
TGGATTTGAAGACGTATAAGAGTTACCAAGAGCTTTCTGATGCATTGGCC
AAGATGTTCAGTTCCTTCACCATGGGTAATTATGGATCACA
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