CK739484

Overview
NameCK739484
Unique NameCK739484
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length589
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739484 vs. ExPASy Swiss-Prot
Match: PSBO_TOBAC (Oxygen-evolving enhancer protein 1, chloroplastic OS=Nicotiana tabacum GN=PSBO PE=2 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 8.551e-74
Identity = 141/172 (81.98%), Postives = 149/172 (86.63%), Query Frame = 1
Query:   73 LMQPTKVGVVPAXXXXXXXXXXXXVSKAFGVDSAGARISCTLNNDLKDLAQKCVDATKIAGFALATSALVVSGASAEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGGVDSFAFKPGKYQAKKFCLEPTSFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVS 588
            LMQPTKVGV PA            VSKAFGV+ A AR++C+L  +LKDLAQK  DA K+AGFALATSALVVSGA+AEGVPKRLT+DEIQSKTYMEVKGTGTANQCPTIDGGV SFAFKPGKY AKKFCLEPTSFTVKAESVNKNAPPDFQ TKLMTRLTYTLDEIEGPFEVS
Sbjct:   11 LMQPTKVGVAPARNNLQLRSAQS-VSKAFGVEPAAARLTCSLQTELKDLAQKFTDAAKVAGFALATSALVVSGANAEGVPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGVASFAFKPGKYNAKKFCLEPTSFTVKAESVNKNAPPDFQKTKLMTRLTYTLDEIEGPFEVS 181          
BLAST of CK739484 vs. ExPASy Swiss-Prot
Match: PSBO_SOLTU (Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum tuberosum GN=PSBO PE=2 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 8.004e-72
Identity = 137/172 (79.65%), Postives = 147/172 (85.47%), Query Frame = 1
Query:   73 LMQPTKVGVVPAXXXXXXXXXXXXVSKAFGVDSAGARISCTLNNDLKDLAQKCVDATKIAGFALATSALVVSGASAEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGGVDSFAFKPGKYQAKKFCLEPTSFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVS 588
            LMQPTKVG V A            VSKAFG++ + +R+SC+L  DLKD AQKC DA KIAGFALATSALVVSGA+AEGVPKRLT+DEIQSKTYMEVKGTGTANQCPTIDGGVDSFAFKPGKY AKKFCLEPTSFTVKAE V+KN+ PDFQ TKLMTRLTYTLDEIEGPFEVS
Sbjct:   11 LMQPTKVGGVSARNNLQLRSSQS-VSKAFGLEPSASRLSCSLQTDLKDFAQKCTDAAKIAGFALATSALVVSGANAEGVPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGVDSFAFKPGKYNAKKFCLEPTSFTVKAEGVSKNSAPDFQKTKLMTRLTYTLDEIEGPFEVS 181          
BLAST of CK739484 vs. ExPASy Swiss-Prot
Match: PSBO_SOLLC (Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum lycopersicum GN=PSBO PE=2 SV=2)

HSP 1 Score: 262.692 bits (670), Expect = 9.784e-70
Identity = 133/172 (77.33%), Postives = 144/172 (83.72%), Query Frame = 1
Query:   73 LMQPTKVGVVPAXXXXXXXXXXXXVSKAFGVDSAGARISCTLNNDLKDLAQKCVDATKIAGFALATSALVVSGASAEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGGVDSFAFKPGKYQAKKFCLEPTSFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVS 588
            LMQPTKVGV               VSKAFGV+    R++C+L  ++K+LAQKC DA KIAGFALATSALVVSGA+AEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTI+GGV SFAFKPGKY AKKFCLEPTSFTVKAE V+KN+ PDFQ TKLMTRLTYTLDEIEGPFEVS
Sbjct:   11 LMQPTKVGV----RNNLQLRSAQSVSKAFGVEQGSGRLTCSLQTEIKELAQKCTDAAKIAGFALATSALVVSGANAEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTIEGGVGSFAFKPGKYTAKKFCLEPTSFTVKAEGVSKNSAPDFQKTKLMTRLTYTLDEIEGPFEVS 178          
BLAST of CK739484 vs. ExPASy Swiss-Prot
Match: PSBO2_ARATH (Oxygen-evolving enhancer protein 1-2, chloroplastic OS=Arabidopsis thaliana GN=PSBO2 PE=1 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 1.012e-66
Identity = 125/170 (73.53%), Postives = 141/170 (82.94%), Query Frame = 1
Query:   76 MQPTKVGVVPAXXXXXXXXXXXXVSKAFGVDSAGARISCTLNNDLKDLAQKCVDATKIAGFALATSALVVSGASAEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGGVDSFAFKPGKYQAKKFCLEPTSFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEV 585
            +QP K+   P+            V K+FG+DS+ AR++C+L++DLKD A KC DA KIAGFALATSALVVSGA AEG PKRLTYDEIQSKTYMEVKGTGTANQCPTIDGG ++F+FK GKY  KKFC EPTSFTVKA+SV+KNAPPDFQNTKLMTRLTYTLDEIEGPFEV
Sbjct:   12 LQPAKIAASPSRNVHLRSNQT--VGKSFGLDSSQARLTCSLHSDLKDFAGKCSDAAKIAGFALATSALVVSGAGAEGAPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGGSETFSFKAGKYTGKKFCFEPTSFTVKADSVSKNAPPDFQNTKLMTRLTYTLDEIEGPFEV 179          
BLAST of CK739484 vs. ExPASy Swiss-Prot
Match: PSBO_PEA (Oxygen-evolving enhancer protein 1, chloroplastic OS=Pisum sativum GN=PSBO PE=2 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 1.727e-66
Identity = 127/172 (73.84%), Postives = 142/172 (82.56%), Query Frame = 1
Query:   73 LMQPTKVGVVPAXXXXXXXXXXXXVSKAFGVDSAGARISCTLNNDLKDLAQKCVDATKIAGFALATSALVVSGASAEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGGVDSFAFKPGKYQAKKFCLEPTSFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVS 588
            LMQPTK+                 VSKAFG++  GA+++C+L +D K+LA KCV+A+KIAGFALATSALVVSGASAEG PKRLT+DEIQSKTY+EVKGTGTANQCPTIDGGVDSF+FKPGKY AKK CLEPTSFTVK+E V KN P  FQNTKLMTRLTYTLDEIEGPFEVS
Sbjct:   11 LMQPTKL-----RSNTLQLKSNQSVSKAFGLEHYGAKVTCSLQSDFKELAHKCVEASKIAGFALATSALVVSGASAEGAPKRLTFDEIQSKTYLEVKGTGTANQCPTIDGGVDSFSFKPGKYNAKKLCLEPTSFTVKSEGVTKNTPLAFQNTKLMTRLTYTLDEIEGPFEVS 177          
BLAST of CK739484 vs. ExPASy Swiss-Prot
Match: PSBO1_ARATH (Oxygen-evolving enhancer protein 1-1, chloroplastic OS=Arabidopsis thaliana GN=PSBO1 PE=1 SV=2)

HSP 1 Score: 247.284 bits (630), Expect = 4.254e-65
Identity = 117/148 (79.05%), Postives = 133/148 (89.86%), Query Frame = 1
Query:  145 VSKAFGVDSAGARISCTLNNDLKDLAQKCVDATKIAGFALATSALVVSGASAEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGGVDSFAFKPGKYQAKKFCLEPTSFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVS 588
            V K+FG++++ AR++C+  +D KD   KC DA KIAGFALATSALVVSGASAEG PKRLTYDEIQSKTYMEVKGTGTANQCPTIDGG ++F+FKPGKY  KKFC EPTSFTVKA+SV+KNAPP+FQNTKLMTRLTYTLDEIEGPFEV+
Sbjct:   34 VGKSFGLETSSARLTCSFQSDFKDFTGKCSDAVKIAGFALATSALVVSGASAEGAPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGGSETFSFKPGKYAGKKFCFEPTSFTVKADSVSKNAPPEFQNTKLMTRLTYTLDEIEGPFEVA 181          
BLAST of CK739484 vs. ExPASy Swiss-Prot
Match: PSBO_FRIAG (Oxygen-evolving enhancer protein 1, chloroplastic OS=Fritillaria agrestis GN=PSBO PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 3.601e-64
Identity = 116/149 (77.85%), Postives = 136/149 (91.28%), Query Frame = 1
Query:  145 VSKAFGVDSAGA-RISCTLNNDLKDLAQKCVDATKIAGFALATSALVVSGASAEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGGVDSFAFKPGKYQAKKFCLEPTSFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVS 588
            +SKAFG D++ A R++C++N+DL+D+AQKC DA K+AGFALATSALV+SGASAEGVPKRLT+DEIQSKTYMEVKG+GTANQCPTI+GG +SF +K GKY  KK CLEPTSFTVKAE +NKNAPP+FQ TKLMTRLTYTLDEIEGPFEV+
Sbjct:   30 LSKAFGFDNSTAGRLTCSINSDLRDIAQKCTDAAKLAGFALATSALVISGASAEGVPKRLTFDEIQSKTYMEVKGSGTANQCPTIEGGTESFGYKTGKYTLKKLCLEPTSFTVKAEGINKNAPPEFQKTKLMTRLTYTLDEIEGPFEVA 178          
BLAST of CK739484 vs. ExPASy Swiss-Prot
Match: PSBO_SPIOL (Oxygen-evolving enhancer protein 1, chloroplastic OS=Spinacia oleracea GN=PSBO PE=1 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 1.787e-63
Identity = 126/173 (72.83%), Postives = 141/173 (81.50%), Query Frame = 1
Query:   76 MQPTKVGVVPAXXXXXXXXXXXXVSKAFGVDSA--GARISCTLNNDLKDLAQKCVDATKIAGFALATSALVVSGASAEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGGVDSFAFKPGKYQAKKFCLEPTSFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVS 588
            +QPTKV    A            V KAFGV+SA  G R+S +L +DLK+LA KCVDATK+AG ALATSAL+ SGA+AEG  KRLTYDEIQSKTY+EVKGTGTANQCPT++GGVDSFAFKPGKY AKKFCLEPT F VKAE ++KN+ PDFQNTKLMTRLTYTLDEIEGPFEVS
Sbjct:   12 LQPTKV----ASRNTLQLRSTQNVCKAFGVESASSGGRLSLSLQSDLKELANKCVDATKLAGLALATSALIASGANAEG-GKRLTYDEIQSKTYLEVKGTGTANQCPTVEGGVDSFAFKPGKYTAKKFCLEPTKFAVKAEGISKNSGPDFQNTKLMTRLTYTLDEIEGPFEVS 179          
BLAST of CK739484 vs. ExPASy Swiss-Prot
Match: PSBO_WHEAT (Oxygen-evolving enhancer protein 1, chloroplastic OS=Triticum aestivum GN=PSBO PE=2 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 3.123e-63
Identity = 116/147 (78.91%), Postives = 132/147 (89.80%), Query Frame = 1
Query:  145 VSKAFGVDSAGARISCTLNNDLKDLAQKCVDATKIAGFALATSALVVSGASAEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGGVDSFAFKPGKYQAKKFCLEPTSFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEV 585
            V++AFGVD AGARI+C+L +D++++A KC DA K+AGFALATSAL+VSGA+AEG PKRLT+DEIQSKTYMEVKGTGTANQCPTIDGGVDSF FK GKY+ KKFCLEPTSFTVKAE + KN PP FQ TKLMTRLTYTLDE+EGP EV
Sbjct:   29 VARAFGVD-AGARITCSLQSDIREVASKCADAAKMAGFALATSALLVSGATAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGVDSFPFKAGKYEMKKFCLEPTSFTVKAEGIQKNEPPRFQKTKLMTRLTYTLDEMEGPLEV 174          

HSP 2 Score: 22.7126 bits (47), Expect = 3.123e-63
Identity = 15/31 (48.39%), Postives = 18/31 (58.06%), Query Frame = 3
Query:   42 MAASLQAAATPDATHQGGCGTRSQQQPAAEV 134
            MAASLQAAAT      G  G  S  +P++ V
Sbjct:    1 MAASLQAAATVMPAKIG--GRASSARPSSHV 29          
BLAST of CK739484 vs. ExPASy Swiss-Prot
Match: PSBO_VOLCA (Oxygen-evolving enhancer protein 1, chloroplastic OS=Volvox carteri GN=PSBO PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.643e-24
Identity = 56/111 (50.45%), Postives = 70/111 (63.06%), Query Frame = 1
Query:  256 FALATSALVVSGASAEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTID-GGVDSFAFKPGKYQAKKFCLEPTSFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEV 585
            F  A +A+V + A   G    LTYDE+Q  TY++VKGTG AN CP ++ G  D      G Y+ + FC+EPTSFTVK ESV K    +F  TKLMTRLTYTLD + G  +V
Sbjct:   32 FGQAAAAVVAASALVAGSANALTYDELQGLTYLQVKGTGIANTCPVLEKGSTDLSELSAGTYKLENFCIEPTSFTVKEESVFKGGETEFVKTKLMTRLTYTLDAMSGTLKV 142          
The following BLAST results are available for this feature:
BLAST of CK739484 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
PSBO_TOBAC8.551e-7481.98Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_SOLTU8.004e-7279.65Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_SOLLC9.784e-7077.33Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO2_ARATH1.012e-6673.53Oxygen-evolving enhancer protein 1-2, chloroplasti... [more]
PSBO_PEA1.727e-6673.84Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO1_ARATH4.254e-6579.05Oxygen-evolving enhancer protein 1-1, chloroplasti... [more]
PSBO_FRIAG3.601e-6477.85Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_SPIOL1.787e-6372.83Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_WHEAT3.123e-6378.91Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_VOLCA3.643e-2450.45Oxygen-evolving enhancer protein 1, chloroplastic ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6322 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE62A04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739484 ID=CK739484; Name=CK739484; organism=Citrus sinensis; type=EST; length=589bp
AAGGGATACTAGCAAGTAACCCACGAGTGGTAGGGAGCAAGATGGCAGCC
TCGTTACAAGCCGCAGCTACACCTGATGCAACCCACCAAGGTGGGTGTGG
TACCCGCTCGCAGCAGCAGCCTGCAGCTGAGGTCTTCACAGAGCGTTTCG
AAGGCTTTTGGTGTCGACTCAGCTGGTGCTAGGATCTCTTGCACTTTGAA
TAATGACTTGAAGGATTTGGCTCAGAAATGTGTTGATGCTACCAAGATCG
CTGGCTTTGCCCTCGCCACTTCTGCTCTCGTCGTTTCGGGAGCAAGTGCT
GAAGGTGTTCCAAAGAGGCTAACCTATGATGAAATCCAGAGCAAGACATA
CATGGAAGTAAAGGGAACCGGAACTGCTAACCAGTGCCCAACCATTGATG
GCGGAGTTGACTCTTTTGCCTTCAAACCTGGCAAATACCAGGCTAAGAAG
TTCTGCCTAGAACCAACTTCCTTCACTGTCAAGGCTGAGAGTGTCAACAA
GAATGCCCCACCAGATTTCCAGAACACCAAGCTCATGACCCGCCTTACCT
ACACCCTTGACGAGATTGAGGGACCTTTTGAAGTGTCCC
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