CK739508
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739508 vs. ExPASy Swiss-Prot
Match: RR18_CITSI (30S ribosomal protein S18, chloroplastic OS=Citrus sinensis GN=rps18 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.031e-24 Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 3 Query: 3 KILSRRVNRLTLKEQRLITIAIKQARILSSLPFLNNEKQFERSGLTARPPGLRTRKK 173 KILSRRVNRLTLKEQRLITIAIKQARILSSLPFLNNEKQFERSGLTARPPGLRTRKK Sbjct: 45 KILSRRVNRLTLKEQRLITIAIKQARILSSLPFLNNEKQFERSGLTARPPGLRTRKK 101
BLAST of CK739508 vs. ExPASy Swiss-Prot
Match: RR18_VITVI (30S ribosomal protein S18, chloroplastic OS=Vitis vinifera GN=rps18 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.153e-19 Identity = 50/57 (87.72%), Postives = 52/57 (91.23%), Query Frame = 3 Query: 3 KILSRRVNRLTLKEQRLITIAIKQARILSSLPFLNNEKQFERSGLTARPPGLRTRKK 173 KILSRRVNRLTLK+QRLITIAIKQARILSSLPFLNNEKQFER+ TAR GLRTR K Sbjct: 45 KILSRRVNRLTLKQQRLITIAIKQARILSSLPFLNNEKQFERTESTARTTGLRTRNK 101
BLAST of CK739508 vs. ExPASy Swiss-Prot
Match: RR18_POPTR (30S ribosomal protein S18, chloroplastic OS=Populus trichocarpa GN=rps18 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.153e-19 Identity = 49/57 (85.96%), Postives = 53/57 (92.98%), Query Frame = 3 Query: 3 KILSRRVNRLTLKEQRLITIAIKQARILSSLPFLNNEKQFERSGLTARPPGLRTRKK 173 KILSRRVNRLTLK+QRLITIAIKQARILSSLPFLNNE+QFE++ L AR GLRTRKK Sbjct: 45 KILSRRVNRLTLKQQRLITIAIKQARILSSLPFLNNERQFEKNELVARTTGLRTRKK 101
BLAST of CK739508 vs. ExPASy Swiss-Prot
Match: RR18_POPAL (30S ribosomal protein S18, chloroplastic OS=Populus alba GN=rps18 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.153e-19 Identity = 49/57 (85.96%), Postives = 53/57 (92.98%), Query Frame = 3 Query: 3 KILSRRVNRLTLKEQRLITIAIKQARILSSLPFLNNEKQFERSGLTARPPGLRTRKK 173 KILSRRVNRLTLK+QRLITIAIKQARILSSLPFLNNE+QFE++ L AR GLRTRKK Sbjct: 45 KILSRRVNRLTLKQQRLITIAIKQARILSSLPFLNNERQFEKNELVARTTGLRTRKK 101
BLAST of CK739508 vs. ExPASy Swiss-Prot
Match: RR18_PLAOC (30S ribosomal protein S18, chloroplastic OS=Platanus occidentalis GN=rps18 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.355e-19 Identity = 49/57 (85.96%), Postives = 51/57 (89.47%), Query Frame = 3 Query: 3 KILSRRVNRLTLKEQRLITIAIKQARILSSLPFLNNEKQFERSGLTARPPGLRTRKK 173 KILSRRVNRLTLK+QRLITIAIKQARILSSLPFLNNEKQFER+ T R PG RTR K Sbjct: 45 KILSRRVNRLTLKQQRLITIAIKQARILSSLPFLNNEKQFERAESTPRTPGPRTRNK 101
BLAST of CK739508 vs. ExPASy Swiss-Prot
Match: RR18_CARPA (30S ribosomal protein S18, chloroplastic OS=Carica papaya GN=rps18 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.355e-19 Identity = 49/57 (85.96%), Postives = 51/57 (89.47%), Query Frame = 3 Query: 3 KILSRRVNRLTLKEQRLITIAIKQARILSSLPFLNNEKQFERSGLTARPPGLRTRKK 173 KILSRRVNRLTLK+QRLITIAIKQARILSSLPFLNNEKQFERS T + GLRTR K Sbjct: 45 KILSRRVNRLTLKQQRLITIAIKQARILSSLPFLNNEKQFERSESTTKTTGLRTRNK 101
BLAST of CK739508 vs. ExPASy Swiss-Prot
Match: RR18_NANDO (30S ribosomal protein S18, chloroplastic OS=Nandina domestica GN=rps18 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.474e-19 Identity = 49/57 (85.96%), Postives = 51/57 (89.47%), Query Frame = 3 Query: 3 KILSRRVNRLTLKEQRLITIAIKQARILSSLPFLNNEKQFERSGLTARPPGLRTRKK 173 KILSRRVNRLTLK+QRLITIAIKQARILSSLPFLNNEKQFER+ T R G RTRKK Sbjct: 44 KILSRRVNRLTLKQQRLITIAIKQARILSSLPFLNNEKQFERTESTPRTTGPRTRKK 100
BLAST of CK739508 vs. ExPASy Swiss-Prot
Match: RR18_GOSHI (30S ribosomal protein S18, chloroplastic OS=Gossypium hirsutum GN=rps18 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.474e-19 Identity = 49/57 (85.96%), Postives = 50/57 (87.72%), Query Frame = 3 Query: 3 KILSRRVNRLTLKEQRLITIAIKQARILSSLPFLNNEKQFERSGLTARPPGLRTRKK 173 KILSRRVNRLTLK+QRLITIAIKQARILSSLPFLNNEKQFERS T R LRTR K Sbjct: 45 KILSRRVNRLTLKQQRLITIAIKQARILSSLPFLNNEKQFERSESTTRTTALRTRNK 101
BLAST of CK739508 vs. ExPASy Swiss-Prot
Match: RR18_COFAR (30S ribosomal protein S18, chloroplastic OS=Coffea arabica GN=rps18 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.474e-19 Identity = 48/57 (84.21%), Postives = 51/57 (89.47%), Query Frame = 3 Query: 3 KILSRRVNRLTLKEQRLITIAIKQARILSSLPFLNNEKQFERSGLTARPPGLRTRKK 173 KILSRRVNRLTLK+QRLIT+AIKQARILS LPFLNNEKQFER+ TAR GLRTR K Sbjct: 45 KILSRRVNRLTLKQQRLITVAIKQARILSLLPFLNNEKQFERTESTARTTGLRTRNK 101
BLAST of CK739508 vs. ExPASy Swiss-Prot
Match: RR18_PANGI (30S ribosomal protein S18, chloroplastic OS=Panax ginseng GN=rps18 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.275e-18 Identity = 48/57 (84.21%), Postives = 51/57 (89.47%), Query Frame = 3 Query: 3 KILSRRVNRLTLKEQRLITIAIKQARILSSLPFLNNEKQFERSGLTARPPGLRTRKK 173 KILSRRVNRLTLK+QRLITIAIKQARILS LPFLNN+KQFER+ TAR GLR RKK Sbjct: 45 KILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNDKQFERTESTARTAGLRARKK 101 The following BLAST results are available for this feature:
BLAST of CK739508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK739508 ID=CK739508; Name=CK739508; organism=Citrus sinensis; type=EST; length=306bpback to top |