CK739511

Overview
NameCK739511
Unique NameCK739511
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length705
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739511 vs. ExPASy Swiss-Prot
Match: PSBQ2_ARATH (Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Arabidopsis thaliana GN=PSBQ2 PE=1 SV=2)

HSP 1 Score: 201.83 bits (512), Expect = 2.515e-62
Identity = 112/182 (61.54%), Postives = 133/182 (73.08%), Query Frame = 2
Query:   59 GLRGSSHSQAVLEGSSQLSGPNRLNAPSNSRVAVA--RSGFTVRAQQASNEPETSRRAMIGLVAAGVASGSFVQAVLADATPIKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLR 598
            GLRG+S  QAVLEGS Q++G NRLN    SRV+V   R+G  +RAQQ  + PE+SRR++IGLVAAG+A GSFV+AV A+A PIKV            T NSD+ RD  L LK+RF+IQPLSP           K+I+NVK  IDKKAWPYVQNDLRLRASYLRYDLNT+ISAKPK+EKQSL+
Sbjct:   10 GLRGAS--QAVLEGSLQINGSNRLNI---SRVSVGSQRTGLVIRAQQNVSVPESSRRSVIGLVAAGLAGGSFVKAVFAEAIPIKVGGPPLPSGGLPGTDNSDQARDFSLALKDRFYIQPLSPTEAAARAKDSAKEIINVKSFIDKKAWPYVQNDLRLRASYLRYDLNTVISAKPKEEKQSLK 186          

HSP 2 Score: 56.9954 bits (136), Expect = 2.515e-62
Identity = 26/37 (70.27%), Postives = 33/37 (89.19%), Query Frame = 1
Query:  595 KNLTGKLFQTIGNLDHAGKIKSTPEAEKYYAETVSTL 705
            K+LT KLFQTI NLD+A + KS+P+AEKYY+ETVS+L
Sbjct:  186 KDLTAKLFQTIDNLDYAARSKSSPDAEKYYSETVSSL 222          
BLAST of CK739511 vs. ExPASy Swiss-Prot
Match: PSBQ_SPIOL (Oxygen-evolving enhancer protein 3, chloroplastic OS=Spinacia oleracea GN=PSBQ PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 1.346e-60
Identity = 110/181 (60.77%), Postives = 131/181 (72.38%), Query Frame = 2
Query:   59 GLRGSSHSQAVLEGSSQLSGPNRLNAPSNSRVAVARSGFTVRAQQASNEPETSRRAMIGLVAAGVASGSFVQAVLADATPIKVXXXXXXXXXXXXTLNSDEPRDLDLP-LKERFFIQPLSPXXXXXXXXXXXKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLR 598
            GLRG+S  QAVLEGS Q+SG NRL+ P+ SRVAV + G  +RAQQ S E ETSRRAM+G VAAG+ASGSFV+AVLA+A PI V            T NSD+ RD  LP  K+RF++QPL P            +ILNVK+ ID+KAWP +QNDLRLRASYLRYDL T+ISAKPKDEK+SL+
Sbjct:   10 GLRGAS--QAVLEGSLQISGSNRLSGPTTSRVAVPKMGLNIRAQQVSAEAETSRRAMLGFVAAGLASGSFVKAVLAEARPIVVGPPPPLSGGLPGTENSDQARDGTLPYTKDRFYLQPLPPTEAAQRAKVSASEILNVKQFIDRKAWPSLQNDLRLRASYLRYDLKTVISAKPKDEKKSLQ 188          

HSP 2 Score: 51.9878 bits (123), Expect = 1.346e-60
Identity = 24/37 (64.86%), Postives = 28/37 (75.68%), Query Frame = 1
Query:  595 KNLTGKLFQTIGNLDHAGKIKSTPEAEKYYAETVSTL 705
            + LT KLF +I NLDHA KIKS  EAEKYY +TVS +
Sbjct:  188 QELTSKLFSSIDNLDHAAKIKSPTEAEKYYGQTVSNI 224          
BLAST of CK739511 vs. ExPASy Swiss-Prot
Match: PSBQ1_ARATH (Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Arabidopsis thaliana GN=PSBQ1 PE=1 SV=3)

HSP 1 Score: 181.8 bits (460), Expect = 7.746e-55
Identity = 109/182 (59.89%), Postives = 129/182 (70.88%), Query Frame = 2
Query:   59 GLRGSSHSQAVLEGSSQLSGPNRLNAPSNSRVAVA-RSGFTVRAQQASNEPETSRRAMIGLVAAGVASGSFVQAVLADATPIKVXXXXXXXXXXXX-TLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLR 598
            GL G+S   AVLEGS +++G +RLN   + RVAVA RS   VRAQQ+    ETSRR++IGLVAAG+A GSFVQAVLADA  IKV             T NSD+ RD  L LK+RF++QPL P           KDI+NVK LID+KAWPYVQNDLR +ASYLRYDLNTIIS+KPKDEK+SL+
Sbjct:    6 GLHGAS--PAVLEGSLKINGSSRLNG--SGRVAVAQRSRLVVRAQQSE---ETSRRSVIGLVAAGLAGGSFVQAVLADAISIKVGPPPAPSGGLPAGTDNSDQARDFALALKDRFYLQPLPPTEAAARAKESAKDIINVKPLIDRKAWPYVQNDLRSKASYLRYDLNTIISSKPKDEKKSLK 180          

HSP 2 Score: 51.9878 bits (123), Expect = 7.746e-55
Identity = 26/37 (70.27%), Postives = 29/37 (78.38%), Query Frame = 1
Query:  595 KNLTGKLFQTIGNLDHAGKIKSTPEAEKYYAETVSTL 705
            K+LT KLF TI NLD+A K KS  +AEKYYAETVS L
Sbjct:  180 KDLTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVSAL 216          
BLAST of CK739511 vs. ExPASy Swiss-Prot
Match: PSBQ_ONOVI (Oxygen-evolving enhancer protein 3, chloroplastic OS=Onobrychis viciifolia GN=PSBQ PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 1.081e-50
Identity = 99/185 (53.51%), Postives = 122/185 (65.95%), Query Frame = 2
Query:   80 SQAVLEGSSQL-SGPNRLNAPSNSRVAVARSGFTVRAQQ---------ASNEPETSRRAMIGLVAAGVASGSFVQAVLADATPIKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLRTS 604
            +  +LEGS QL SG NR  + S+SR       F VRAQQ         ++ +P+++RRAM+GLVA G+AS SFVQAVLA+A PIKV            TLNSDE RDL LPLKERF+IQPLSP           K+I+ VK+ ID+K      NDLRLRASYLRYDLNT+IS+KPK++KQSL+ S
Sbjct:    6 ASGLLEGSLQLMSGSNR--SSSSSRTRGPAGVFIVRAQQQEQQQGMSSSAADPQSNRRAMLGLVATGLASASFVQAVLAEAKPIKVGGPPPPSGGLGGTLNSDEARDLKLPLKERFYIQPLSPTEAAQRQRESAKEIVAVKKFIDQKLGHMFINDLRLRASYLRYDLNTVISSKPKEQKQSLKES 188          

HSP 2 Score: 54.6842 bits (130), Expect = 1.081e-50
Identity = 24/41 (58.54%), Postives = 33/41 (80.49%), Query Frame = 1
Query:  583 ETIPKNLTGKLFQTIGNLDHAGKIKSTPEAEKYYAETVSTL 705
            +++ ++  GKLFQ I NLD+A K+KS P+AEKYYA+ VSTL
Sbjct:  183 QSLKESSAGKLFQDIDNLDYAAKLKSAPQAEKYYADAVSTL 223          
BLAST of CK739511 vs. ExPASy Swiss-Prot
Match: PSBQ1_MAIZE (Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Zea mays GN=PSBQ1 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 5.649e-46
Identity = 86/177 (48.59%), Postives = 110/177 (62.15%), Query Frame = 2
Query:   74 SHSQAVLEGSSQLSGPNRLNAPSNSRVAVARSGFTVRAQQASNE-PETSRRAMIGLVAAGVASGSFVQAVLADATP-IKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLR 598
            + + A + G SQ   P+R  A S +R AV      VRA    +   +  RRA+IGLVA G+  G+  QA  A+    IK+            TLNSD+ RD DLPLKERF++QPL P           +DI+N+K LIDKKAWPYVQNDLRLRASYLRYDL T+I++KPK+EK+SL+
Sbjct:    2 AQAMASMTGLSQGVLPSR-RADSRTRTAVV----IVRASAEGDAVAQAGRRAVIGLVATGIVGGALSQAARAETVKTIKIGAPPPPSGGLPGTLNSDQARDFDLPLKERFYLQPLPPAEAAARVKTSAQDIINLKPLIDKKAWPYVQNDLRLRASYLRYDLKTVIASKPKEEKKSLK 173          

HSP 2 Score: 56.6102 bits (135), Expect = 5.649e-46
Identity = 27/37 (72.97%), Postives = 29/37 (78.38%), Query Frame = 1
Query:  595 KNLTGKLFQTIGNLDHAGKIKSTPEAEKYYAETVSTL 705
            K LTGKLF TI +LDHA KIKSTPEAEKY+A T   L
Sbjct:  173 KELTGKLFSTIDDLDHAAKIKSTPEAEKYFAATKDAL 209          
BLAST of CK739511 vs. ExPASy Swiss-Prot
Match: PSBQ_ORYSJ (Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os07g0544800 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 7.363e-46
Identity = 83/169 (49.11%), Postives = 111/169 (65.68%), Query Frame = 2
Query:   95 EGSSQLSGPNRLNAPSNSRVAVARSGFTVRAQQASNEPETSRRAMIGLVAAGVASGSFVQAVLADAT-PIKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLR 598
            +G    +GP R  A   SR+AV      VRA  A+ + +T RRA++GLVA G+A G+  QA LA+A  PIK+            TLNSD+ RD DLPL+ERF++QPL P           +DI+N+K LI+KK WP+V++DLRLRASYLRYDL T+I++KPKDEK+ L+
Sbjct:   13 QGVQLPAGPRR--AGGRSRLAV------VRADAAAADVQTGRRAVLGLVATGIAGGALAQAALAEAAKPIKLGPPPPPSGGLPGTLNSDQARDTDLPLRERFYLQPLPPAEAAARAKESAQDIINLKPLIEKKQWPFVRDDLRLRASYLRYDLKTVINSKPKDEKKGLK 173          

HSP 2 Score: 51.6026 bits (122), Expect = 7.363e-46
Identity = 26/37 (70.27%), Postives = 27/37 (72.97%), Query Frame = 1
Query:  595 KNLTGKLFQTIGNLDHAGKIKSTPEAEKYYAETVSTL 705
            K+LTGKLF TI  LDHA KIKS  EAEKYY  T S L
Sbjct:  173 KDLTGKLFATIDGLDHAAKIKSPEEAEKYYTLTKSAL 209          
BLAST of CK739511 vs. ExPASy Swiss-Prot
Match: PSBQ_ORYSI (Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_025465 PE=1 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 7.363e-46
Identity = 83/169 (49.11%), Postives = 111/169 (65.68%), Query Frame = 2
Query:   95 EGSSQLSGPNRLNAPSNSRVAVARSGFTVRAQQASNEPETSRRAMIGLVAAGVASGSFVQAVLADAT-PIKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLR 598
            +G    +GP R  A   SR+AV      VRA  A+ + +T RRA++GLVA G+A G+  QA LA+A  PIK+            TLNSD+ RD DLPL+ERF++QPL P           +DI+N+K LI+KK WP+V++DLRLRASYLRYDL T+I++KPKDEK+ L+
Sbjct:   13 QGVQLPAGPRR--AGGRSRLAV------VRADAAAADVQTGRRAVLGLVATGIAGGALAQAALAEAAKPIKLGPPPPPSGGLPGTLNSDQARDTDLPLRERFYLQPLPPAEAAARAKESAQDIINLKPLIEKKQWPFVRDDLRLRASYLRYDLKTVINSKPKDEKKGLK 173          

HSP 2 Score: 51.6026 bits (122), Expect = 7.363e-46
Identity = 26/37 (70.27%), Postives = 27/37 (72.97%), Query Frame = 1
Query:  595 KNLTGKLFQTIGNLDHAGKIKSTPEAEKYYAETVSTL 705
            K+LTGKLF TI  LDHA KIKS  EAEKYY  T S L
Sbjct:  173 KDLTGKLFATIDGLDHAAKIKSPEEAEKYYTLTKSAL 209          
BLAST of CK739511 vs. ExPASy Swiss-Prot
Match: PSBQ2_MAIZE (Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Zea mays GN=PSBQ2 PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 7.014e-40
Identity = 75/176 (42.61%), Postives = 102/176 (57.95%), Query Frame = 2
Query:   74 SHSQAVLEGSSQLSGPNRLNAPSNSRVAVARSGFTVRAQQASNEPETSRRAMIGLVAAGVASGSFVQAVLADATP-IKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLR 598
            + + A + G SQ   P   ++ + + V V R+  +    + +  P   R      + A  +S    QAV A+    IK+            TLNSD+ RD DLPLKERF++QPL P           +DI+N+K LIDKKAWPYVQNDLRLRASYLRYDL T+I++KPK+EK+SL+
Sbjct:    2 AQAMASMTGLSQGVCPAAADSRTRTAVVVVRA--SAEGDRCAGGPRCDR------LVATASSPPLSQAVHAETVKTIKIGAPPPPSGGLPGTLNSDQTRDFDLPLKERFYLQPLPPAEAVARVKTSAQDIINLKPLIDKKAWPYVQNDLRLRASYLRYDLKTVIASKPKEEKKSLK 169          

HSP 2 Score: 55.4546 bits (132), Expect = 7.014e-40
Identity = 26/37 (70.27%), Postives = 29/37 (78.38%), Query Frame = 1
Query:  595 KNLTGKLFQTIGNLDHAGKIKSTPEAEKYYAETVSTL 705
            K LTGKLF TI +LDHA K+KSTPEAEKY+A T   L
Sbjct:  169 KELTGKLFSTIDDLDHAAKMKSTPEAEKYFAATKDAL 205          
The following BLAST results are available for this feature:
BLAST of CK739511 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
PSBQ2_ARATH2.515e-6261.54Oxygen-evolving enhancer protein 3-2, chloroplasti... [more]
PSBQ_SPIOL1.346e-6060.77Oxygen-evolving enhancer protein 3, chloroplastic ... [more]
PSBQ1_ARATH7.746e-5559.89Oxygen-evolving enhancer protein 3-1, chloroplasti... [more]
PSBQ_ONOVI1.081e-5053.51Oxygen-evolving enhancer protein 3, chloroplastic ... [more]
PSBQ1_MAIZE5.649e-4648.59Oxygen-evolving enhancer protein 3-1, chloroplasti... [more]
PSBQ_ORYSJ7.363e-4649.11Oxygen-evolving enhancer protein 3, chloroplastic ... [more]
PSBQ_ORYSI7.363e-4649.11Oxygen-evolving enhancer protein 3, chloroplastic ... [more]
PSBQ2_MAIZE7.014e-4042.61Oxygen-evolving enhancer protein 3-2, chloroplasti... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_6349 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE62D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739511 ID=CK739511; Name=CK739511; organism=Citrus sinensis; type=EST; length=705bp
GCAAAGTTTCTGAAACCTGATTTAGTGAAAAATGGCACAAGCTATGGCGT
CAATGGCTGGCTTACGTGGATCCTCCCACTCGCAGGCTGTTCTTGAAGGT
AGCTCCCAGCTCAGTGGCCCAAACCGCTTGAACGCCCCTAGCAACAGCAG
AGTTGCTGTGGCTCGCTCTGGTTTCACTGTTAGAGCCCAGCAGGCATCAA
ACGAGCCTGAAACTAGCCGCCGTGCTATGATTGGTCTTGTTGCTGCAGGT
GTGGCCTCAGGTTCCTTTGTTCAAGCTGTACTTGCTGATGCCACTCCCAT
CAAAGTTGGTCCTCCTCCTCCACCCTCTGGCGGATTGCCTGGAACGTTGA
ACTCTGATGAGCCAAGAGACCTGGATCTGCCACTGAAGGAGAGGTTCTTC
ATCCAACCACTTAGTCCAGCCCAGGCGGCAGAGAGAGCAAAGGCGTCAGC
AAAGGATATTCTTAATGTCAAGGAATTAATAGACAAGAAGGCCTGGCCCT
ATGTTCAGAATGATCTCCGTCTCAGGGCCTCATACCTTCGCTATGACCTC
AACACTATCATTTCTGCTAAGCCCAAAGATGAGAAACAATCCCTAAGAAC
CTCACTGGAAAGCTCTTCCAGACCATCGGCAATCTTGACCATGCGGGAAA
GATTAAGAGCACTCCTGAAGCAGAGAAATACTATGCTGAGACTGTATCTA
CCCTG
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