CK739527
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739527 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.547e-16 Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 3 Query: 3 KSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 122 KSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY Sbjct: 171 KSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 210 HSP 2 Score: 22.3274 bits (46), Expect = 2.547e-16 Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 2 Query: 137 DIIRKGKMC 163 DII+KGKMC Sbjct: 215 DIIKKGKMC 223
BLAST of CK739527 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 2.548e-16 Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 3 Query: 3 KSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 122 KSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY Sbjct: 162 KSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 201 HSP 2 Score: 22.3274 bits (46), Expect = 2.548e-16 Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 2 Query: 137 DIIRKGKMC 163 DII+KGKMC Sbjct: 206 DIIKKGKMC 214
BLAST of CK739527 vs. ExPASy Swiss-Prot
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.552e-16 Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 3 Query: 3 KSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 122 KSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY Sbjct: 171 KSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 210 HSP 2 Score: 22.3274 bits (46), Expect = 2.552e-16 Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 2 Query: 137 DIIRKGKMC 163 DII+KGKMC Sbjct: 215 DIIKKGKMC 223
BLAST of CK739527 vs. ExPASy Swiss-Prot
Match: RCA_CUCSA (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.555e-16 Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 3 Query: 3 KSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 122 KSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY Sbjct: 168 KSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 207 HSP 2 Score: 22.3274 bits (46), Expect = 2.555e-16 Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 2 Query: 137 DIIRKGKMC 163 DII+KGKMC Sbjct: 212 DIIKKGKMC 220
BLAST of CK739527 vs. ExPASy Swiss-Prot
Match: RCA_PHAVU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.310e-16 Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 3 Query: 3 KSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 122 KSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY Sbjct: 175 KSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 214 HSP 2 Score: 21.557 bits (44), Expect = 4.310e-16 Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = 2 Query: 137 DIIRKGKMC 163 D+I+KGKMC Sbjct: 219 DLIKKGKMC 227
BLAST of CK739527 vs. ExPASy Swiss-Prot
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 4.566e-16 Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 3 Query: 3 KSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 122 KSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY Sbjct: 173 KSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 212
BLAST of CK739527 vs. ExPASy Swiss-Prot
Match: RCAA_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.566e-16 Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 3 Query: 3 KSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 122 KSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY Sbjct: 161 KSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 200
BLAST of CK739527 vs. ExPASy Swiss-Prot
Match: RCA_SPIOL (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 1.017e-15 Identity = 39/40 (97.50%), Postives = 40/40 (100.00%), Query Frame = 3 Query: 3 KSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 122 KSFQCELVFAK+GINPIMMSAGELESGNAGEPAKLIRQRY Sbjct: 169 KSFQCELVFAKLGINPIMMSAGELESGNAGEPAKLIRQRY 208
BLAST of CK739527 vs. ExPASy Swiss-Prot
Match: RCA_MAIZE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Zea mays GN=RCA1 PE=2 SV=3) HSP 1 Score: 81.6481 bits (200), Expect = 1.328e-15 Identity = 43/54 (79.63%), Postives = 44/54 (81.48%), Query Frame = 3 Query: 3 KSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYP*GS-LTLSGREKC 161 KSFQCELVFAKMGI PIMMSAGELESGNAGEPAKLIRQRY S L G+ C Sbjct: 167 KSFQCELVFAKMGITPIMMSAGELESGNAGEPAKLIRQRYREASDLIKKGKMSC 220
BLAST of CK739527 vs. ExPASy Swiss-Prot
Match: RCA_SOLPN (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Solanum pennellii PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.735e-15 Identity = 39/40 (97.50%), Postives = 39/40 (97.50%), Query Frame = 3 Query: 3 KSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 122 KSFQCELVF KMGINPIMMSAGELESGNAGEPAKLIRQRY Sbjct: 170 KSFQCELVFRKMGINPIMMSAGELESGNAGEPAKLIRQRY 209 The following BLAST results are available for this feature:
BLAST of CK739527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739527 ID=CK739527; Name=CK739527; organism=Citrus sinensis; type=EST; length=163bpback to top |