CK739530
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739530 vs. ExPASy Swiss-Prot
Match: PFD2_ARATH (Probable prefoldin subunit 2 OS=Arabidopsis thaliana GN=At3g22480 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 5.230e-36 Identity = 73/101 (72.28%), Postives = 86/101 (85.15%), Query Frame = 3 Query: 75 REPVNEQIVANMYTSMRSELNQIYSKITELEMEASEHSLVINAIKPLDPSRKCYRMIGGVLVERTISEVLPAVQRNKEGIEEVIARLNEALAAKKKEISDF 377 REP NEQ V NMY RSEL+QIYS IT+LEM+ SEHSLVINAI+PLD SRKC+RMIGGVLVERTI EVLPAVQRNK+G+EEV+ +L E L KKK++++F Sbjct: 11 REPPNEQAVLNMYEGKRSELSQIYSNITDLEMQVSEHSLVINAIQPLDQSRKCFRMIGGVLVERTIKEVLPAVQRNKDGLEEVVRKLYETLEKKKKDLTEF 111
BLAST of CK739530 vs. ExPASy Swiss-Prot
Match: PFD2_DICDI (Probable prefoldin subunit 2 OS=Dictyostelium discoideum GN=pfdn2 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.745e-23 Identity = 47/104 (45.19%), Postives = 79/104 (75.96%), Query Frame = 3 Query: 66 TERREPVNEQIVANMYTSMRSELNQIYSKITELEMEASEHSLVINAIKPLDPSRKCYRMIGGVLVERTISEVLPAVQRNKEGIEEVIARLNEALAAKKKEISDF 377 +++++ + E + Y ++S+ QI S+I+E E + E+ LVINAI+ L+ +RKC+RM+GGVLVERT+ EVLP +++N++GI+EV+ +L+E L+ K KE++DF Sbjct: 2 SQQKQQLTENQIIEHYKDLKSQQQQIISRISEFESDVGEYGLVINAIQNLESNRKCFRMVGGVLVERTVGEVLPQIKQNRDGIKEVVKKLDENLSIKTKELNDF 105
BLAST of CK739530 vs. ExPASy Swiss-Prot
Match: PFD2_HUMAN (Prefoldin subunit 2 OS=Homo sapiens GN=PFDN2 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 6.631e-23 Identity = 51/96 (53.12%), Postives = 72/96 (75.00%), Query Frame = 3 Query: 90 EQIVANMYTSMRSELNQIYSKITELEMEASEHSLVINAIKPLDPSRKCYRMIGGVLVERTISEVLPAVQRNKEGIEEVIARLNEALAAKKKEISDF 377 EQ++A + +R E + SK ELEME +EHSLVI+ +K +D +RKCYRM+GGVLVERT+ EVLPA++ NKE I+++I L + L AK KE+++F Sbjct: 24 EQVIAG-FNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKCYRMVGGVLVERTVKEVLPALENNKEQIQKIIETLTQQLQAKGKELNEF 118
BLAST of CK739530 vs. ExPASy Swiss-Prot
Match: PFD2_BOVIN (Prefoldin subunit 2 OS=Bos taurus GN=PFDN2 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 6.631e-23 Identity = 51/96 (53.12%), Postives = 72/96 (75.00%), Query Frame = 3 Query: 90 EQIVANMYTSMRSELNQIYSKITELEMEASEHSLVINAIKPLDPSRKCYRMIGGVLVERTISEVLPAVQRNKEGIEEVIARLNEALAAKKKEISDF 377 EQ++A + +R E + SK ELEME +EHSLVI+ +K +D +RKCYRM+GGVLVERT+ EVLPA++ NKE I+++I L + L AK KE+++F Sbjct: 24 EQVIAG-FNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKCYRMVGGVLVERTVKEVLPALENNKEQIQKIIETLTQQLQAKGKELNEF 118
BLAST of CK739530 vs. ExPASy Swiss-Prot
Match: PFD2_RAT (Prefoldin subunit 2 OS=Rattus norvegicus GN=Pfdn2 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 8.660e-23 Identity = 51/96 (53.12%), Postives = 73/96 (76.04%), Query Frame = 3 Query: 90 EQIVANMYTSMRSELNQIYSKITELEMEASEHSLVINAIKPLDPSRKCYRMIGGVLVERTISEVLPAVQRNKEGIEEVIARLNEALAAKKKEISDF 377 EQ++A + +R E + SK ELEME +EHSLVI+ +K +D +RKCYRM+GGVLVERT+ EVLPA++ NKE I+++I L++ L AK KE+++F Sbjct: 24 EQVIAG-FNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKCYRMVGGVLVERTVKEVLPALEGNKEQIQKIIETLSQQLQAKGKELNEF 118
BLAST of CK739530 vs. ExPASy Swiss-Prot
Match: PFD2_MOUSE (Prefoldin subunit 2 OS=Mus musculus GN=Pfdn2 PE=2 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 8.660e-23 Identity = 51/96 (53.12%), Postives = 73/96 (76.04%), Query Frame = 3 Query: 90 EQIVANMYTSMRSELNQIYSKITELEMEASEHSLVINAIKPLDPSRKCYRMIGGVLVERTISEVLPAVQRNKEGIEEVIARLNEALAAKKKEISDF 377 EQ++A + +R E + SK ELEME +EHSLVI+ +K +D +RKCYRM+GGVLVERT+ EVLPA++ NKE I+++I L++ L AK KE+++F Sbjct: 24 EQVIAG-FNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKCYRMVGGVLVERTVKEVLPALEGNKEQIQKIIETLSQQLQAKGKELNEF 118
BLAST of CK739530 vs. ExPASy Swiss-Prot
Match: PFD2_SCHPO (Probable prefoldin subunit 2 OS=Schizosaccharomyces pombe GN=SPAC227.10 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.339e-15 Identity = 39/100 (39.00%), Postives = 61/100 (61.00%), Query Frame = 3 Query: 78 EPVNEQIVANMYTSMRSELNQIYSKITELEMEASEHSLVINAIKPLDPSRKCYRMIGGVLVERTISEVLPAVQRNKEGIEEVIARLNEALAAKKKEISDF 377 +P +QI+ Y S +S L QI KI +LE +A EH LV++ + +D +R+C+RMI GVLVERT+ V+P ++ +EGI+ + L + + E F Sbjct: 4 QPSRQQILQTQYNSYKSRLQQIAQKIVDLETDADEHKLVMDTLNSMDNNRRCFRMIHGVLVERTVGTVVPILKTTQEGIQTAMNGLLDQYKQLEAEFQKF 103
BLAST of CK739530 vs. ExPASy Swiss-Prot
Match: PFD2_DROME (Probable prefoldin subunit 2 OS=Drosophila melanogaster GN=l(3)01239 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.089e-15 Identity = 38/105 (36.19%), Postives = 62/105 (59.05%), Query Frame = 3 Query: 66 TERREP-VNEQIVANMYTSMRSELNQIYSKITELEMEASEHSLVINAIKPLDPSRKCYRMIGGVLVERTISEVLPAVQRNKEGIEEVIARLNEALAAKKKEISDF 377 TE +P ++++ + + +R+E + + + LEM+ EH VI ++ DP RKC+R IGGVL ERT+ EVLP + NK+ I + I + L+ K E++ F Sbjct: 3 TESAKPALSQEAIVAQFQQLRNEQRNLVNSLNTLEMDLREHKTVIETLEAADPERKCFRQIGGVLCERTVKEVLPQLVENKDFIAKTIQMVTNDLSKKGSELNKF 107
BLAST of CK739530 vs. ExPASy Swiss-Prot
Match: PFD2_YEAST (Prefoldin subunit 2 OS=Saccharomyces cerevisiae GN=GIM4 PE=1 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 1.637e-13 Identity = 35/85 (41.18%), Postives = 51/85 (60.00%), Query Frame = 3 Query: 111 YTSMRSELNQIYSKITELEMEASEHSLVINAIKPLDPSRKCYRMIGGVLVERTISEVLPAVQRNKEGIEEVIARLNEALAAKKKE 365 Y + L ++ +KI EL + EH++VI +K +P+RKCYRMIGG LVE + LP ++ KE IE I+++ E L KE Sbjct: 12 YNEYKQILEELQTKIIELGHDKDEHTIVIKTLKDAEPTRKCYRMIGGALVESDVQTSLPILETKKENIEGTISKMKETLIQTAKE 96
BLAST of CK739530 vs. ExPASy Swiss-Prot
Match: PFD2_CAEEL (Probable prefoldin subunit 2 OS=Caenorhabditis elegans GN=tag-355 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.614e-11 Identity = 35/106 (33.02%), Postives = 59/106 (55.66%), Query Frame = 3 Query: 54 AEPETERREPVNEQIVANMYTSMRSELNQIYSKITELEMEASEHSLVINAIKPLDPSRKCYRMIGGVLVERTISEVLPAVQRNKEGIEEVIARLNEALAAKKKEIS 371 AE E +R+ V + ++R + I +++T +E E E V+ IK L+P +KC+R+I LVE T+ +V+P +Q N + V +LN+ L K KE++ Sbjct: 12 AEQEEQRK-------VVEKFKALRDQQQDIAAEVTRIEEERREFGRVLEVIKDLEPDQKCFRLISDTLVEYTVKDVIPDLQNNIANLTIVSKQLNDQLVEKGKELN 110 The following BLAST results are available for this feature:
BLAST of CK739530 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK739530 ID=CK739530; Name=CK739530; organism=Citrus sinensis; type=EST; length=379bpback to top |