CK739559

Overview
NameCK739559
Unique NameCK739559
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739559 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 236.884 bits (603), Expect = 5.952e-62
Identity = 117/174 (67.24%), Postives = 138/174 (79.31%), Query Frame = 1
Query:   91 AFSLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLK---SLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATV--PLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAG 597
            +F+  EL+  T++FR D +LGEGGFG+V+KG+IDE      K    + +AVK LN++G QGH+EWL EVN+LGQ  HPNLVKLIGYC ED+HRLLVYEFM RGSLENHLFR+ +   PLSW  R+ +A GAAKGLAFLHNAE  VIYRDFKTSNILLDS+Y AKLSDFGLAK G
Sbjct:   56 SFTFAELKAATRNFRPDSVLGEGGFGSVFKGWIDEQTLTASKPGTGVVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWTLRLKVALGAAKGLAFLHNAETSVIYRDFKTSNILLDSEYNAKLSDFGLAKDG 229          
BLAST of CK739559 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 235.728 bits (600), Expect = 1.326e-61
Identity = 117/173 (67.63%), Postives = 140/173 (80.92%), Query Frame = 1
Query:   94 FSLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLK---SLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATV--PLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAG 597
            FSL EL++ T++FR D ++GEGGFG V+KG+IDE+     K    + +AVK LN+EG QGHREWL E+N+LGQL HPNLVKLIGYC E++HRLLVYEFM RGSLENHLFR+ T   PLSW TR+ +A GAA+GLAFLHNA+  VIYRDFK SNILLDS+Y AKLSDFGLA+ G
Sbjct:   56 FSLSELKSATRNFRPDSVVGEGGFGCVFKGWIDESSLAPSKPGTGIVIAVKRLNQEGFQGHREWLAEINYLGQLDHPNLVKLIGYCLEEEHRLLVYEFMTRGSLENHLFRRGTFYQPLSWNTRVRMALGAARGLAFLHNAQPQVIYRDFKASNILLDSNYNAKLSDFGLARDG 228          
BLAST of CK739559 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 4.716e-59
Identity = 111/172 (64.53%), Postives = 133/172 (77.33%), Query Frame = 1
Query:   91 AFSLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLK---SLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAG 597
            AF+  EL+  TK+FR D +LGEGGFG V+KG+ID+      +    + VAVK L  EG QGH+EWLTEVN+LGQL HPNLV L+GYC E ++RLLVYEFM +GSLENHLFR+   PL+WA RM +A GAAKGL FLH A+  VIYRDFK +NILLD+D+ AKLSDFGLAKAG
Sbjct:   73 AFTFNELKNATKNFRQDNLLGEGGFGCVFKGWIDQTSLTASRPGSGIVVAVKQLKPEGFQGHKEWLTEVNYLGQLSHPNLVLLVGYCAEGENRLLVYEFMPKGSLENHLFRRGAQPLTWAIRMKVAVGAAKGLTFLHEAKSQVIYRDFKAANILLDADFNAKLSDFGLAKAG 244          
BLAST of CK739559 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 6.160e-59
Identity = 114/174 (65.52%), Postives = 136/174 (78.16%), Query Frame = 1
Query:   91 AFSLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLK---SLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATV--PLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAG 597
            +FS  EL++ T++FR D +LGEGGFG V+KG+IDE      +    L +AVK LN++G QGH+EWL EVN+LGQ  H +LVKLIGYC ED+HRLLVYEFM RGSLENHLFR+     PLSW  R+ +A GAAKGLAFLH++E  VIYRDFKTSNILLDS+Y AKLSDFGLAK G
Sbjct:   55 SFSFAELKSATRNFRPDSVLGEGGFGCVFKGWIDEKSLTASRPGTGLVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGLYFQPLSWKLRLKVALGAAKGLAFLHSSETRVIYRDFKTSNILLDSEYNAKLSDFGLAKDG 228          
BLAST of CK739559 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.372e-58
Identity = 116/202 (57.43%), Postives = 143/202 (70.79%), Query Frame = 1
Query:    7 SISDLSDPSTPRNLEDSRKNAVLYTHVIAFSLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLK---SLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATV--PLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAG 597
            S+S     ST    + +    +  T V +F+  EL+  T++FR D ++GEGGFG V+KG++DE+     K    L +AVK LN+EG QGHREWLTE+N+LGQL HPNLVKLIGYC ED+HRLLVYEFM +GSLENHLFR+     PL W  R+ +A  AAKGLAFLH+    VIYRD K SNILLD+DY AKLSDFGLA+ G
Sbjct:   26 SLSSRKSSSTVAAAQKTEGEILSSTPVKSFTFNELKLATRNFRPDSVIGEGGFGCVFKGWLDESTLTPTKPGTGLVIAVKKLNQEGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEHRLLVYEFMQKGSLENHLFRRGAYFKPLPWFLRVNVALDAAKGLAFLHSDPVKVIYRDIKASNILLDADYNAKLSDFGLARDG 227          
BLAST of CK739559 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.372e-58
Identity = 110/172 (63.95%), Postives = 134/172 (77.91%), Query Frame = 1
Query:   91 AFSLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLK---SLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAG 597
            AF+  EL+  T++FR D +LGEGGFG V+KG+ID       K    + VAVK L  EG QGH+EWLTEVN+LGQL HPNLVKL+GYC E ++RLLVYEFM +GSLENHLFR+   PL+WA RM +A GAAKGL FLH+A+  VIYRDFK +NILLD+++ +KLSDFGLAKAG
Sbjct:   70 AFTFNELKNATRNFRPDSLLGEGGFGYVFKGWIDGTTLTASKPGSGIVVAVKKLKTEGYQGHKEWLTEVNYLGQLSHPNLVKLVGYCVEGENRLLVYEFMPKGSLENHLFRRGAQPLTWAIRMKVAIGAAKGLTFLHDAKSQVIYRDFKAANILLDAEFNSKLSDFGLAKAG 241          
BLAST of CK739559 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 4.414e-57
Identity = 113/179 (63.13%), Postives = 134/179 (74.86%), Query Frame = 1
Query:   79 THVIAFSLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKS---LPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLF---RKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAG 597
            T V +FS  EL+  T++FRSD ++GEGGFG V++G++DE      KS   L +AVK LN +G QGHREWLTE+N+LGQL HPNLVKLIGYC ED+ RLLVYEFM +GSLENHLF    K   PLSW  R+ +A  AAKGLAFLH+    VIYRD K SNILLDSD+ AKLSDFGLA+ G
Sbjct:   44 TTVKSFSFNELKLATRNFRSDSVVGEGGFGCVFRGWLDETTLTPTKSSSGLVIAVKRLNPDGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEQRLLVYEFMHKGSLENHLFANGNKDFKPLSWILRIKVALDAAKGLAFLHSDPVKVIYRDIKASNILLDSDFNAKLSDFGLARDG 222          
BLAST of CK739559 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 2.346e-50
Identity = 102/172 (59.30%), Postives = 126/172 (73.26%), Query Frame = 1
Query:   94 FSLFELETITKSFRSDYILGEGGFGTVYKGYIDENV----RVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAG 597
            ++  +L+T TK+F+ D +LG+GGFG VY+G++D       RVG   + VA+K LN E +QG  EW +EVNFLG L H NLVKL+GYC ED   LLVYEFM +GSLE+HLFR+   P  W  R+ I  GAA+GLAFLH+ +R VIYRDFK SNILLDS+Y AKLSDFGLAK G
Sbjct:   74 YNFLDLKTATKNFKPDSMLGQGGFGKVYRGWVDATTLAPSRVG-SGMIVAIKRLNSESVQGFAEWRSEVNFLGMLSHRNLVKLLGYCREDKELLLVYEFMPKGSLESHLFRR-NDPFPWDLRIKIVIGAARGLAFLHSLQREVIYRDFKASNILLDSNYDAKLSDFGLAKLG 243          
BLAST of CK739559 vs. ExPASy Swiss-Prot
Match: Y5707_ARATH (Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.205e-46
Identity = 104/207 (50.24%), Postives = 131/207 (63.29%), Query Frame = 1
Query:    1 NRSISDLSDPSTPRNLEDSRKNAVLYT----HVIAFSLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDD----HRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAG 597
            NRS +   +  TPR+L   R    LYT    ++  FS  EL   T  F    ++GEGGFG VYKG I  N       L VA+K LN++GLQGH++WL EV FLG + HPN+VKLIGYC ED      RLLVYE+M   SLE+HLF + +  L W  R+ I  GAA+GL +LH+ +  VIYRDFK+SN+LLD  +  KLSDFGLA+ G
Sbjct:   39 NRSETSSFNLQTPRSLPSPRSIKDLYTEREQNLRVFSYEELSKATYVFSRKLVIGEGGFGIVYKGKILSNGDSSDPPLVVAIKKLNRQGLQGHKQWLAEVQFLGVVNHPNVVKLIGYCSEDGETGIERLLVYEYMSNRSLEDHLFPRRSHTLPWKKRLEIMLGAAEGLTYLHDLK--VIYRDFKSSNVLLDDQFCPKLSDFGLAREG 243          
BLAST of CK739559 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 2.778e-43
Identity = 100/171 (58.48%), Postives = 113/171 (66.08%), Query Frame = 1
Query:   94 FSLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHL--FRKATVPLSWATRMMIAFGAAKGLAFLHN-AERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAG 597
            F+  EL   T +F  D  LGEGGFG VYKG +D   +V      VAVK L++ GLQG+RE+L EV  L  L HPNLV LIGYC + D RLLVYEFM  GSLE+HL         L W  RM IA GAAKGL FLH+ A  PVIYRDFK+SNILLD  +  KLSDFGLAK G
Sbjct:   74 FAFRELAAATMNFHPDTFLGEGGFGRVYKGRLDSTGQV------VAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLG 238          
The following BLAST results are available for this feature:
BLAST of CK739559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APK1B_ARATH5.952e-6267.24Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
NAK_ARATH1.326e-6167.63Probable serine/threonine-protein kinase NAK OS=Ar... [more]
APK2A_ARATH4.716e-5964.53Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
APK1A_ARATH6.160e-5965.52Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
BIK1_ARATH1.372e-5857.43Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
APK2B_ARATH1.372e-5863.95Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
Y3545_ARATH4.414e-5763.13Probable receptor-like protein kinase At3g55450 OS... [more]
CX32_ARATH2.346e-5059.30Probable serine/threonine-protein kinase Cx32, chl... [more]
Y5707_ARATH1.205e-4650.24Probable receptor-like protein kinase At5g47070 OS... [more]
PBS1_ARATH2.778e-4358.48Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_5946 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE57A04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739559 ID=CK739559; Name=CK739559; organism=Citrus sinensis; type=EST; length=598bp
AACCGTTCGATATCAGATCTGAGCGATCCTTCCACTCCGCGTAATTTAGA
GGACTCTAGGAAGAATGCTGTGCTCTATACTCACGTAATTGCCTTCTCTT
TGTTCGAACTCGAGACCATTACGAAGAGCTTTCGCTCTGATTATATTCTT
GGAGAAGGCGGTTTTGGCACCGTCTATAAAGGTTACATTGATGAGAATGT
GAGGGTCGGCCTCAAATCTTTACCCGTTGCCGTCAAGGTCCTCAATAAGG
AAGGCCTTCAGGGACACCGTGAATGGCTTACGGAGGTCAACTTCCTAGGT
CAACTTAGGCATCCGAATCTGGTTAAATTGATTGGGTATTGTTGCGAGGA
CGATCACAGGTTACTTGTGTATGAGTTCATGTTCAGAGGAAGCCTTGAGA
ATCACTTGTTTCGAAAGGCAACTGTCCCACTATCATGGGCCACAAGAATG
ATGATTGCTTTTGGAGCTGCCAAAGGGCTTGCTTTCCTTCACAATGCTGA
AAGGCCAGTTATATATCGGGACTTCAAAACCTCTAATATCTTGTTGGACT
CAGATTATACGGCCAAGCTTTCTGATTTTGGTCTTGCAAAAGCTGGAC
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