CK739563

Overview
NameCK739563
Unique NameCK739563
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length559
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739563 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 3.591e-47
Identity = 90/171 (52.63%), Postives = 119/171 (69.59%), Query Frame = 1
Query:   49 EEEVKLYGTWVSPFSRRIELALKLKGVPFEYIGLDLSNKSPELLKYNPIHKKIPVLVHNGKSIVESLIILEYIDDTWKNNPILPRDPHQRAVARFWAKFIDEKLLATGMKAXXXXXXXXXXXXXXXXXQ-MKLLENELNGKDFFGGEAIGLVDIVATVVAFWFPVSHEVLG 558
            +E+VKL G   SPF  R+++ALKLKGV ++++  +L NKS  LLKYNP+HKK+PV VHN + I ESL+I+EYID+TWKNNPILP DP+QRA+ARFW+KFID+K++    K+                 + ++ LENEL  K FFGGE  GLVDI A  +AFW P+  E+ G
Sbjct:    5 QEDVKLLGIVGSPFVCRVQIALKLKGVEYKFLEENLGNKSDLLLKYNPVHKKVPVFVHNEQPIAESLVIVEYIDETWKNNPILPSDPYQRALARFWSKFIDDKIVGAVSKSVFTVDEKEREKNVEETYEALQFLENELKDKKFFGGEEFGLVDIAAVFIAFWIPIFQEIAG 175          
BLAST of CK739563 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.179e-44
Identity = 90/168 (53.57%), Postives = 113/168 (67.26%), Query Frame = 1
Query:   55 EVKLYGTWVSPFSRRIELALKLKGVPFEYIGLDLSNKSPELLKYNPIHKKIPVLVHNGKSIVESLIILEYIDDTWKNNPILPRDPHQRAVARFWAKFIDEKLLATGMKAXXXXXXXXXXXXXXXXXQMKLLENELNGKDFFGGEAIGLVDIVATVVAFWFPVSHEVLG 558
            EVKL G W SPFSRR+E ALK+KGV +EYI  D  NKS  LL+ NPIHKK+PVL+HNGK IVES++ILEYID+T++   ILP+DP+ RA+ARFWAKF+D+K+ A  +K                   +K+L+NEL  K FF G+  G  DI A +VAFW  V  E  G
Sbjct:    3 EVKLLGFWYSPFSRRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPIHKKVPVLIHNGKRIVESMVILEYIDETFEGPSILPKDPYDRALARFWAKFLDDKVPAV-VKTFLRKGEEQEKDKEEVCEMLKVLDNELKDKKFFVGDKFGFADIAANLVAFWLGVFEEASG 169          
BLAST of CK739563 vs. ExPASy Swiss-Prot
Match: GSTXA_ARATH (Glutathione S-transferase 103-1A OS=Arabidopsis thaliana GN=103-1A PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 2.846e-44
Identity = 88/159 (55.35%), Postives = 115/159 (72.33%), Query Frame = 1
Query:   43 MAE-EEVKLYGTWVSPFSRRIELALKLKGVPFEYIGLDLSNKSPELLKYNPIHKKIPVLVHNGKSIVESLIILEYIDDTWKNNPILPRDPHQRAVARFWAKFIDEKLLATGMKAXXXXXXXXXXXXXXXXXQMKL-LENELNGKDFFGGEAIGLVDIVA 513
            MAE EEVKL G W SPFSRR+E+ALKLKG+P+EY+   L NKSP LL  NPIHKK+PVLVHNGK+I+ES +ILEYID+TW  NPILP+DP++R+ ARF+AK +DE+++  G  +                 ++ + LE EL GKD+FGG+ +G +D VA
Sbjct:    1 MAEKEEVKLLGIWASPFSRRVEMALKLKGIPYEYVEEILENKSPLLLALNPIHKKVPVLVHNGKTILESHVILEYIDETWPQNPILPQDPYERSKARFFAKLVDEQIMNVGFISMARADEKGREVLAEQVRELIMYLEKELVGKDYFGGKTVGFLDFVA 159          
BLAST of CK739563 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 2.039e-42
Identity = 86/168 (51.19%), Postives = 110/168 (65.48%), Query Frame = 1
Query:   55 EVKLYGTWVSPFSRRIELALKLKGVPFEYIGLDLSNKSPELLKYNPIHKKIPVLVHNGKSIVESLIILEYIDDTWKNNPILPRDPHQRAVARFWAKFIDEKLLATGMKAXXXXXXXXXXXXXXXXXQMKLLENELNGKDFFGGEAIGLVDIVATVVAFWFPVSHEVLG 558
            EVKL G W SPFS R+E ALK+KGV +EYI  D  NKS  LL+ NP++KK+PVL+HNGK IVES+IILEYID+T++   ILP+DP+ RA+ARFWAKF+D+K+ A  +                    +K+L+NEL  K FF G+  G  DI A +V FW  V  E  G
Sbjct:    3 EVKLLGFWYSPFSHRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPVYKKVPVLIHNGKPIVESMIILEYIDETFEGPSILPKDPYDRALARFWAKFLDDKVAAV-VNTFFRKGEEQEKGKEEVYEMLKVLDNELKDKKFFAGDKFGFADIAANLVGFWLGVFEEGYG 169          
BLAST of CK739563 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 2.255e-41
Identity = 84/168 (50.00%), Postives = 109/168 (64.88%), Query Frame = 1
Query:   55 EVKLYGTWVSPFSRRIELALKLKGVPFEYIGLDLSNKSPELLKYNPIHKKIPVLVHNGKSIVESLIILEYIDDTWKNNPILPRDPHQRAVARFWAKFIDEKLLATGMKAXXXXXXXXXXXXXXXXXQMKLLENELNGKDFFGGEAIGLVDIVATVVAFWFPVSHEVLG 558
            EVKL G W SPF+ R+E ALKLKGV +EYI  D  NKS  LL+ NP+HKK+PVL+HNGK IVES++ILEYID+T++   ILP+DP+ RA+ARFW+KF+ +K+ A  +                    +K+L+NEL  K FF G+  G  DI A +V FW  V  E  G
Sbjct:    3 EVKLLGFWYSPFTHRVEWALKLKGVKYEYIEEDRDNKSSLLLQSNPVHKKVPVLIHNGKPIVESMVILEYIDETFEGPSILPKDPYDRALARFWSKFLGDKVAAV-VNTFFRKGEEQEKGKEEVYEMLKVLDNELKDKKFFVGDKFGFADIAANLVGFWLGVFEEGYG 169          
BLAST of CK739563 vs. ExPASy Swiss-Prot
Match: GSTX1_SOLTU (Probable glutathione S-transferase OS=Solanum tuberosum GN=PRP1 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 3.980e-38
Identity = 82/168 (48.81%), Postives = 107/168 (63.69%), Query Frame = 1
Query:   55 EVKLYGTWVSPFSRRIELALKLKGVPFEYIGLDLSNKSPELLKYNPIHKKIPVLVHNGKSIVESLIILEYIDDTWKNNPILPRDPHQRAVARFWAKFIDEKLLATGMKAXXXXXXXXXXXXXXXXXQMKLLENELNGKDFFGGEAIGLVDIVATVVAFWFPVSHEVLG 558
            EVKL G   SPFS R+E ALK+KGV +E+I  DL NKSP LL+ NPIHKKIPVL+HNGK I ES++ILEYID+ ++   ILP+DP+ RA+ARFWAK++++K  A   K+                  +K+L+NE   K  F G+  G  DIVA   A +  +  EV G
Sbjct:    3 EVKLLGLRYSPFSHRVEWALKIKGVKYEFIEEDLQNKSPLLLQSNPIHKKIPVLIHNGKCICESMVILEYIDEAFEGPSILPKDPYDRALARFWAKYVEDKGAAV-WKSFFSKGEEQEKAKEEAYEMLKILDNEFKDKKCFVGDKFGFADIVANGAALYLGILEEVSG 169          
BLAST of CK739563 vs. ExPASy Swiss-Prot
Match: GSTXA_TOBAC (Probable glutathione S-transferase parA OS=Nicotiana tabacum GN=PARA PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.198e-34
Identity = 72/165 (43.64%), Postives = 99/165 (60.00%), Query Frame = 1
Query:   43 MAEEEVKLYGTWVSPFSRRIELALKLKGVPFEYIGLDLSNKSPELLKYNPIHKKIPVLVHNGKSIVESLIILEYIDDTWKNN-PILPRDPHQRAVARFWAKFIDEKLLATGMKAXXXXXXXXXXXXXXXXXQMKLLENELNGKDFFGGEAIGLVDIVATVVAFWF 534
            M    V L   W S F  R+ +AL LKG+ +E    +LS+KSP LL+ NP+HKKIP+L+HN K+I ESL ILEYID+ W +  P+LP DP++R+ ARFWA +ID+K+ +TG +                   +K LE EL  K +FGG+ +G VD+       WF
Sbjct:    1 MESNNVVLLDFWPSSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNSKAICESLNILEYIDEVWHDKCPLLPSDPYERSQARFWADYIDKKIYSTGRRVWSGKGEDQEEAKKEFIEILKTLEGELGNKTYFGGDNLGFVDVALVPFTSWF 165          
BLAST of CK739563 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.198e-34
Identity = 80/174 (45.98%), Postives = 101/174 (58.05%), Query Frame = 1
Query:   43 MAEEEVKLYGTWVSPFSRRIELALKLKGVPFEYIGLDLSNKSPELLKYNPIHKKIPVLVHNGKSIVESLIILEYIDDTWKNNP--ILPRDPHQRAVARFWAKFIDEKLLATGMKAXXXXXXXXXXXXXXXXXQMKLLENELNGKDFFGGEAIGLVDIVATVVAFWFPVSHEVLG 558
            MA EEV L   W S F  R+ +AL  K + +EY   DL NKSP LL+ NPIHKKIPVL+HNGK I ES+I +EYI++ WK+    +LP DP+ RA ARFWA +ID+KL   G K                   +K+LE  L  K +FGGE+ G VDI       WF  ++E  G
Sbjct:    1 MANEEVILLDFWPSMFGMRLRIALAEKEIKYEYKEEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPNLLPSDPYDRAQARFWADYIDKKLYDFGRKLWTTKGEEQEAAKKDFIECLKVLEGALGDKPYFGGESFGFVDIALIGYYSWF-YAYETFG 173          
BLAST of CK739563 vs. ExPASy Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 2.670e-34
Identity = 79/174 (45.40%), Postives = 101/174 (58.05%), Query Frame = 1
Query:   43 MAEEEVKLYGTWVSPFSRRIELALKLKGVPFEYIGLDLSNKSPELLKYNPIHKKIPVLVHNGKSIVESLIILEYIDDTWKNN--PILPRDPHQRAVARFWAKFIDEKLLATGMKAXXXXXXXXXXXXXXXXXQMKLLENELNGKDFFGGEAIGLVDIVATVVAFWFPVSHEVLG 558
            MA EEV L   W S F  R+ +AL  K + +EY   DL NKSP LL+ NPIHKKIPVL+HNGK I ES+I +EYI++ WK+    +LP DP+ RA ARFWA +ID+KL   G K                   +K+LE  L  + +FGGE+ G VDI       WF  ++E  G
Sbjct:    1 MANEEVILLDFWPSMFGMRLRIALAEKEIKYEYKQEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPSLLPSDPYDRAQARFWADYIDKKLYDFGRKLWATKGEEQEAAKKDFIECLKVLEGALGDRPYFGGESFGFVDIALIGFYSWF-YAYETFG 173          
BLAST of CK739563 vs. ExPASy Swiss-Prot
Match: GSTX1_NICPL (Probable glutathione S-transferase MSR-1 OS=Nicotiana plumbaginifolia GN=MSR-1 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.260e-33
Identity = 70/152 (46.05%), Postives = 92/152 (60.53%), Query Frame = 1
Query:   82 SPFSRRIELALKLKGVPFEYIGLDLSNKSPELLKYNPIHKKIPVLVHNGKSIVESLIILEYIDDTWKNN-PILPRDPHQRAVARFWAKFIDEKLLATGMKAXXXXXXXXXXXXXXXXXQMKLLENELNGKDFFGGEAIGLVDIVATVVAFWF 534
            S F  R+ +AL LKG+ +E    +LS+KSP LL+ NP+HKKIP+L+HNGK I ESL ILEYID+ W    P+LP DP+QR+ ARFWA +ID K+ +TG +                    K LE EL  K +FGG+ +G VD+       WF
Sbjct:   14 SSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNGKPICESLNILEYIDEVWHEKCPLLPSDPYQRSQARFWANYIDNKIYSTGRRVWSGKGEDQEEAKKEFIEIFKTLEGELGNKTYFGGDNLGFVDVALVPFTSWF 165          
The following BLAST results are available for this feature:
BLAST of CK739563 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
GSTX6_SOYBN3.591e-4752.63Probable glutathione S-transferase OS=Glycine max ... [more]
GSTX1_TOBAC2.179e-4453.57Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXA_ARATH2.846e-4455.35Glutathione S-transferase 103-1A OS=Arabidopsis th... [more]
GSTX2_TOBAC2.039e-4251.19Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX3_TOBAC2.255e-4150.00Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_SOLTU3.980e-3848.81Probable glutathione S-transferase OS=Solanum tube... [more]
GSTXA_TOBAC1.198e-3443.64Probable glutathione S-transferase parA OS=Nicotia... [more]
GSTX4_TOBAC1.198e-3445.98Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXC_TOBAC2.670e-3445.40Probable glutathione S-transferase parC OS=Nicotia... [more]
GSTX1_NICPL2.260e-3346.05Probable glutathione S-transferase MSR-1 OS=Nicoti... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_5950 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE57A08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739563 ID=CK739563; Name=CK739563; organism=Citrus sinensis; type=EST; length=559bp
AAATGATCTCTGTAAAGAGACCTTGGCATAAGTTTATAACTTATGGCTGA
AGAAGAAGTGAAGCTCTATGGCACATGGGTAAGCCCTTTTAGTCGCAGAA
TCGAGCTTGCACTGAAACTGAAAGGGGTTCCGTTTGAGTACATAGGATTA
GATCTGTCCAACAAGAGTCCTGAACTTCTGAAATACAATCCAATTCACAA
GAAAATCCCAGTGCTTGTACACAATGGCAAATCAATTGTTGAATCTCTAA
TCATTCTCGAGTACATCGACGACACGTGGAAGAATAATCCTATTTTGCCT
CGAGATCCTCATCAAAGAGCCGTGGCTCGCTTCTGGGCTAAGTTCATCGA
CGAAAAGCTGTTGGCAACAGGAATGAAGGCCAGTTTATCTGAAGGGAAGG
AGAAAGAGCTGTTGAATGAAGAAATACTTGAGCAGATGAAATTGCTGGAG
AATGAACTCAATGGAAAAGACTTCTTTGGAGGTGAGGCGATTGGGCTTGT
TGACATTGTTGCAACTGTGGTCGCATTTTGGTTCCCAGTAAGCCATGAAG
TTCTTGGAG
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