CK739570

Overview
NameCK739570
Unique NameCK739570
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length411
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739570 vs. ExPASy Swiss-Prot
Match: PRU1_PRUAR (Major allergen Pru ar 1 OS=Prunus armeniaca PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.947e-23
Identity = 51/112 (45.54%), Postives = 71/112 (63.39%), Query Frame = 3
Query:   78 MGVTRFEREYPAAVAASRMFKAFV-DSPNLLPKATPQAFKSIEGLEGDGGVGTVTLWTFPDGGHYKQVKQRIDALDNDNFTCKYTMYDGDGILAVAEKGVYDVKIEASGNGG 410
            MGV  +E E+ + +   ++FKAF+ D+ NL+PK  P A K  E LEGDGGVGT+   TF +G  Y  VK R+D +D DN +  YT+ +GD +  V E   YD+K+ AS +GG
Sbjct:    1 MGVFTYETEFTSVIPPEKLFKAFILDADNLIPKVAPTAVKGTEILEGDGGVGTIKKVTFGEGSQYAYVKHRVDGIDKDNLSYSYTLIEGDALSDVIENIAYDIKLVASPDGG 112          
BLAST of CK739570 vs. ExPASy Swiss-Prot
Match: MAL12_MALDO (Major allergen Mal d 1 OS=Malus domestica PE=1 SV=3)

HSP 1 Score: 105.531 bits (262), Expect = 8.573e-23
Identity = 53/111 (47.75%), Postives = 71/111 (63.96%), Query Frame = 3
Query:   78 MGVTRFEREYPAAVAASRMFKAFV-DSPNLLPKATPQAFKSIEGLEGDGGVGTVTLWTFPDGGHYKQVKQRIDALDNDNFTCKYTMYDGDGILAVAEKGVYDVKIEASGNG 407
            MGV  FE EY + +   R+FKAFV D+ NL+PK  PQA K  E LEGDGG GT+   TF +G  Y  VK +ID++D  N++  YT+ +GD +    EK  Y+ K+ ASG+G
Sbjct:    1 MGVYTFENEYTSEIPPPRLFKAFVLDADNLIPKIAPQAIKHAEILEGDGGPGTIKKITFGEGSQYGYVKHKIDSVDEANYSYAYTLIEGDALTDTIEKVSYETKLVASGSG 111          
BLAST of CK739570 vs. ExPASy Swiss-Prot
Match: MPAC1_CORAV (Major pollen allergen Cor a 1 isoforms 5, 6, 11 and 16 OS=Corylus avellana PE=1 SV=3)

HSP 1 Score: 103.99 bits (258), Expect = 2.494e-22
Identity = 51/112 (45.54%), Postives = 74/112 (66.07%), Query Frame = 3
Query:   78 MGVTRFEREYPAAVAASRMFKAFV-DSPNLLPKATPQAFKSIEGLEGDGGVGTVTLWTFPDGGHYKQVKQRIDALDNDNFTCKYTMYDGDGILAVAEKGVYDVKIEASGNGG 410
            MGV  +E E P+ + A+R+FK++V D   L+PK  PQA  S+E +EG+GG GT+   TF +G  YK VK+R+D +DN NFT  YT+ +GD +    EK  +++KI A+  GG
Sbjct:    1 MGVFNYEVETPSVIPAARLFKSYVLDGDKLIPKVAPQAITSVENVEGNGGPGTIKNITFGEGSRYKYVKERVDEVDNTNFTYSYTVIEGDVLGDKLEKVCHELKIVAAPGGG 112          
BLAST of CK739570 vs. ExPASy Swiss-Prot
Match: MAL11_MALDO (Major allergen Mal d 1 OS=Malus domestica GN=MALD1 PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 9.479e-22
Identity = 51/111 (45.95%), Postives = 71/111 (63.96%), Query Frame = 3
Query:   78 MGVTRFEREYPAAVAASRMFKAFV-DSPNLLPKATPQAFKSIEGLEGDGGVGTVTLWTFPDGGHYKQVKQRIDALDNDNFTCKYTMYDGDGILAVAEKGVYDVKIEASGNG 407
            MGV  FE E+ + +  SR+FKAFV D+ NL+PK  PQA K  E LEG+GG GT+   TF +G  Y  VK RID++D  +++  YT+ +GD +    EK  Y+ K+ A G+G
Sbjct:    1 MGVYTFENEFTSEIPPSRLFKAFVLDADNLIPKIAPQAIKQAEILEGNGGPGTIKKITFGEGSQYGYVKHRIDSIDEASYSYSYTLIEGDALTDTIEKISYETKLVACGSG 111          
BLAST of CK739570 vs. ExPASy Swiss-Prot
Match: BEV1M_BETVE (Major pollen allergen Bet v 1-M/N OS=Betula verrucosa GN=BETV1M PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 9.479e-22
Identity = 49/112 (43.75%), Postives = 73/112 (65.18%), Query Frame = 3
Query:   78 MGVTRFEREYPAAVAASRMFKAFV-DSPNLLPKATPQAFKSIEGLEGDGGVGTVTLWTFPDGGHYKQVKQRIDALDNDNFTCKYTMYDGDGILAVAEKGVYDVKIEASGNGG 410
            MGV  +E E  + + A+R+FKAF+ D  NL+PK  PQA  S+E +EG+GG GT+   TFP+G  +K VK+R+D +D+ NF   Y+M +G  +    EK   ++KI A+ +GG
Sbjct:    1 MGVFNYESETTSVIPAARLFKAFILDGDNLIPKVAPQAISSVENIEGNGGPGTIKKITFPEGSPFKYVKERVDEVDHANFKYSYSMIEGGALGDTLEKICNEIKIVATPDGG 112          
BLAST of CK739570 vs. ExPASy Swiss-Prot
Match: PRU1_PRUAV (Major allergen Pru av 1 OS=Prunus avium GN=PRUA1 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.238e-21
Identity = 51/112 (45.54%), Postives = 72/112 (64.29%), Query Frame = 3
Query:   78 MGVTRFEREYPAAVAASRMFKAFV-DSPNLLPKATPQAFKSIEGLEGDGGVGTVTLWTFPDGGHYKQVKQRIDALDNDNFTCKYTMYDGDGILAVAEKGVYDVKIEASGNGG 410
            MGV  +E E+ + +   R+FKAFV D+ NL+PK  PQA K  E LEGDGG GT+   TF +G  Y  VK +ID++D +N++  YT+ +GD +    EK  Y+ K+ AS +GG
Sbjct:    1 MGVFTYESEFTSEIPPPRLFKAFVLDADNLVPKIAPQAIKHSEILEGDGGPGTIKKITFGEGSQYGYVKHKIDSIDKENYSYSYTLIEGDALGDTLEKISYETKLVASPSGG 112          
BLAST of CK739570 vs. ExPASy Swiss-Prot
Match: PYRC1_PYRCO (Major allergen Pyr c 1 OS=Pyrus communis GN=PYRC1 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 4.704e-21
Identity = 49/111 (44.14%), Postives = 71/111 (63.96%), Query Frame = 3
Query:   78 MGVTRFEREYPAAVAASRMFKAFV-DSPNLLPKATPQAFKSIEGLEGDGGVGTVTLWTFPDGGHYKQVKQRIDALDNDNFTCKYTMYDGDGILAVAEKGVYDVKIEASGNG 407
            MG+  FE E+ + +   R+FKAFV D+ NL+PK  PQA K  E LEG+GG GT+   TF +G  Y  VK R+D++D  +++  YT+ +GD +    EK  Y+ K+ ASG+G
Sbjct:    1 MGLYTFENEFTSEIPPPRLFKAFVLDADNLIPKIAPQAIKHAEILEGNGGPGTIKKITFGEGSQYGYVKHRVDSIDEASYSYAYTLIEGDALTDTIEKISYEAKLVASGSG 111          
BLAST of CK739570 vs. ExPASy Swiss-Prot
Match: MPAG1_ALNGL (Major pollen allergen Aln g 1 OS=Alnus glutinosa PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 8.024e-21
Identity = 47/112 (41.96%), Postives = 72/112 (64.29%), Query Frame = 3
Query:   78 MGVTRFEREYPAAVAASRMFKAFV-DSPNLLPKATPQAFKSIEGLEGDGGVGTVTLWTFPDGGHYKQVKQRIDALDNDNFTCKYTMYDGDGILAVAEKGVYDVKIEASGNGG 410
            MGV  +E E P+ + A+R+FKAF+ D   LLPK  P+A  S+E +EG+GG GT+   TFP+G  +K VK+R+D +D  NF   +++ +G  +    EK   ++KI A+ +GG
Sbjct:    1 MGVFNYEAETPSVIPAARLFKAFILDGDKLLPKVAPEAVSSVENIEGNGGPGTIKKITFPEGSPFKYVKERVDEVDRVNFKYSFSVIEGGAVGDALEKVCNEIKIVAAPDGG 112          
BLAST of CK739570 vs. ExPASy Swiss-Prot
Match: BEV1K_BETVE (Major pollen allergen Bet v 1-K OS=Betula verrucosa GN=BETV1K PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 1.369e-20
Identity = 47/112 (41.96%), Postives = 72/112 (64.29%), Query Frame = 3
Query:   78 MGVTRFEREYPAAVAASRMFKAFV-DSPNLLPKATPQAFKSIEGLEGDGGVGTVTLWTFPDGGHYKQVKQRIDALDNDNFTCKYTMYDGDGILAVAEKGVYDVKIEASGNGG 410
            MGV  +E E  + + A+R+FKAF+ +   L+PK  PQA  S+E +EG+GG GT+   TFP+G  +K VK+R+D +D+ NF   Y+M +G  +    EK   ++KI A+ +GG
Sbjct:    1 MGVFNYESETTSVIPAARLFKAFILEGDTLIPKVAPQAISSVENIEGNGGPGTIKKITFPEGSPFKYVKERVDEVDHANFKYSYSMIEGGALGDTLEKICNEIKIVATPDGG 112          
BLAST of CK739570 vs. ExPASy Swiss-Prot
Match: BEV1C_BETVE (Major pollen allergen Bet v 1-C OS=Betula verrucosa GN=BETV1C PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 1.369e-20
Identity = 47/112 (41.96%), Postives = 72/112 (64.29%), Query Frame = 3
Query:   78 MGVTRFEREYPAAVAASRMFKAFV-DSPNLLPKATPQAFKSIEGLEGDGGVGTVTLWTFPDGGHYKQVKQRIDALDNDNFTCKYTMYDGDGILAVAEKGVYDVKIEASGNGG 410
            MGV  +E E  + + A+R+FKAF+ +   L+PK  PQA  S+E +EG+GG GT+   TFP+G  +K VK+R+D +D+ NF   Y+M +G  +    EK   ++KI A+ +GG
Sbjct:    1 MGVFNYESETTSVIPAARLFKAFILEGDTLIPKVAPQAISSVENIEGNGGPGTIKKITFPEGSPFKYVKERVDEVDHANFKYSYSMIEGGALGDTLEKICNEIKIVATPDGG 112          
The following BLAST results are available for this feature:
BLAST of CK739570 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
PRU1_PRUAR2.947e-2345.54Major allergen Pru ar 1 OS=Prunus armeniaca PE=1 S... [more]
MAL12_MALDO8.573e-2347.75Major allergen Mal d 1 OS=Malus domestica PE=1 SV=... [more]
MPAC1_CORAV2.494e-2245.54Major pollen allergen Cor a 1 isoforms 5, 6, 11 an... [more]
MAL11_MALDO9.479e-2245.95Major allergen Mal d 1 OS=Malus domestica GN=MALD1... [more]
BEV1M_BETVE9.479e-2243.75Major pollen allergen Bet v 1-M/N OS=Betula verruc... [more]
PRU1_PRUAV1.238e-2145.54Major allergen Pru av 1 OS=Prunus avium GN=PRUA1 P... [more]
PYRC1_PYRCO4.704e-2144.14Major allergen Pyr c 1 OS=Pyrus communis GN=PYRC1 ... [more]
MPAG1_ALNGL8.024e-2141.96Major pollen allergen Aln g 1 OS=Alnus glutinosa P... [more]
BEV1K_BETVE1.369e-2041.96Major pollen allergen Bet v 1-K OS=Betula verrucos... [more]
BEV1C_BETVE1.369e-2041.96Major pollen allergen Bet v 1-C OS=Betula verrucos... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_5957 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE57B03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739570 ID=CK739570; Name=CK739570; organism=Citrus sinensis; type=EST; length=411bp
GAAACAACCTCTTCTACCTCCAGTGCAGCAAAAATATATCCATTTCTTTC
TCTTTAAGCTAATAAATTATTATCAACATGGGTGTCACTCGCTTTGAGAG
AGAGTATCCAGCTGCTGTCGCTGCATCAAGAATGTTCAAGGCTTTTGTTG
ACTCTCCCAATTTGTTACCGAAGGCCACACCGCAAGCATTCAAGAGCATC
GAGGGTCTGGAAGGAGATGGAGGCGTTGGCACTGTCACGCTATGGACCTT
TCCTGATGGTGGGCATTACAAGCAAGTGAAGCAAAGAATCGACGCACTTG
ACAATGACAATTTCACATGCAAGTACACCATGTACGACGGAGATGGGATC
TTGGCAGTTGCAGAGAAAGGGGTGTACGATGTTAAGATCGAGGCTTCTGG
CAATGGGGGAT
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