CK739611
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739611 vs. ExPASy Swiss-Prot
Match: R35A1_ARATH (60S ribosomal protein L35a-1 OS=Arabidopsis thaliana GN=RPL35AA PE=3 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 3.887e-56 Identity = 103/112 (91.96%), Postives = 106/112 (94.64%), Query Frame = 3 Query: 54 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQVEGVNTKEEVAWYCGKRLAYIYKAKTKKNGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 389 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSL+QVEGVNT EEV+WY GKR+AYIYKAKTKKNGSHYRCIWGKV R HGNSGVVRAKF SNLPPKSMG RVRVFMYPSNI Sbjct: 1 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQVEGVNTTEEVSWYKGKRMAYIYKAKTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112
BLAST of CK739611 vs. ExPASy Swiss-Prot
Match: R35A3_ARATH (60S ribosomal protein L35a-3 OS=Arabidopsis thaliana GN=RPL35AC PE=2 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 6.630e-56 Identity = 102/112 (91.07%), Postives = 106/112 (94.64%), Query Frame = 3 Query: 54 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQVEGVNTKEEVAWYCGKRLAYIYKAKTKKNGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 389 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSL+Q+EGVNT+EEV WY GKR+AYIYKAKTKKNGSHYRCIWGKV R HGNSGVVRAKF SNLPPKSMG RVRVFMYPSNI Sbjct: 1 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRMAYIYKAKTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112
BLAST of CK739611 vs. ExPASy Swiss-Prot
Match: R35A2_ARATH (60S ribosomal protein L35a-2 OS=Arabidopsis thaliana GN=RPL35AB PE=3 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 1.250e-54 Identity = 100/111 (90.09%), Postives = 105/111 (94.59%), Query Frame = 3 Query: 57 VKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQVEGVNTKEEVAWYCGKRLAYIYKAKTKKNGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 389 +KGRQGERVRLYVRGT+LGYKRSKSNQYPNTSLIQ+EGVNT+EEV WY GKRLAYIYKAKTKKNGSHYRCIWGKV R HGNSGVVR+KF SNLPPKSMG RVRVFMYPSNI Sbjct: 1 MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLIQIEGVNTQEEVNWYKGKRLAYIYKAKTKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111
BLAST of CK739611 vs. ExPASy Swiss-Prot
Match: R35A4_ARATH (60S ribosomal protein L35a-4 OS=Arabidopsis thaliana GN=RPL35AD PE=3 SV=2) HSP 1 Score: 211.46 bits (537), Expect = 1.633e-54 Identity = 99/111 (89.19%), Postives = 105/111 (94.59%), Query Frame = 3 Query: 57 VKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQVEGVNTKEEVAWYCGKRLAYIYKAKTKKNGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 389 +KGRQGERVRLYVRGT+LGYKRSKSNQYPNTSL+Q+EGVNT+EEV WY GKRLAYIYKAKTKKNGSHYRCIWGKV R HGNSGVVR+KF SNLPPKSMG RVRVFMYPSNI Sbjct: 1 MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRLAYIYKAKTKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111
BLAST of CK739611 vs. ExPASy Swiss-Prot
Match: RL33B_YEAST (60S ribosomal protein L33-B OS=Saccharomyces cerevisiae GN=RPL33B PE=1 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 2.374e-29 Identity = 60/105 (57.14%), Postives = 77/105 (73.33%), Query Frame = 3 Query: 75 ERVRLYVRGTILGYKRSKSNQYPNTSLIQVEGVNTKEEVAWYCGKRLAYIYKAKTKKNGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 389 E RLYV+G L Y+RSK PN SLI++EGV T +E +Y GKR+AY+Y+A + GS R +WGKV R+HGNSGVVRA F++NLP K+ G VR+F+YPSNI Sbjct: 3 ESHRLYVKGKHLSYQRSKRVNNPNVSLIKIEGVATPQEAQFYLGKRIAYVYRASKEVRGSKIRVMWGKVTRTHGNSGVVRATFRNNLPAKTFGASVRIFLYPSNI 107
BLAST of CK739611 vs. ExPASy Swiss-Prot
Match: RL33A_YEAST (60S ribosomal protein L33-A OS=Saccharomyces cerevisiae GN=RPL33A PE=1 SV=3) HSP 1 Score: 126.716 bits (317), Expect = 5.290e-29 Identity = 59/105 (56.19%), Postives = 77/105 (73.33%), Query Frame = 3 Query: 75 ERVRLYVRGTILGYKRSKSNQYPNTSLIQVEGVNTKEEVAWYCGKRLAYIYKAKTKKNGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 389 E RLYV+G L Y+RSK PN SLI++EGV T ++ +Y GKR+AY+Y+A + GS R +WGKV R+HGNSGVVRA F++NLP K+ G VR+F+YPSNI Sbjct: 3 ESHRLYVKGKHLSYQRSKRVNNPNVSLIKIEGVATPQDAQFYLGKRIAYVYRASKEVRGSKIRVMWGKVTRTHGNSGVVRATFRNNLPAKTFGASVRIFLYPSNI 107
BLAST of CK739611 vs. ExPASy Swiss-Prot
Match: RL33A_SCHPO (60S ribosomal protein L33-A OS=Schizosaccharomyces pombe GN=rpl33a PE=2 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 2.457e-26 Identity = 53/102 (51.96%), Postives = 73/102 (71.57%), Query Frame = 3 Query: 84 RLYVRGTILGYKRSKSNQYPNTSLIQVEGVNTKEEVAWYCGKRLAYIYKAKTKKNGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 389 RLYV+ L ++RSK +P TSL+++EG ++KEE +Y GKR+ ++YK+ GS R IWG V+R HGNSGVVRA+F NLPPK+ G +RV +YPSN+ Sbjct: 7 RLYVKAKHLSFQRSKHVIHPGTSLVKIEGCDSKEEAQFYLGKRICFVYKSNKPVRGSKIRVIWGTVSRPHGNSGVVRARFTHNLPPKTFGASLRVMLYPSNV 108
BLAST of CK739611 vs. ExPASy Swiss-Prot
Match: RL35A_DICDI (60S ribosomal protein L35a OS=Dictyostelium discoideum GN=rpl35a PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 5.474e-26 Identity = 51/103 (49.51%), Postives = 80/103 (77.67%), Query Frame = 3 Query: 84 RLYVRGTILGYKRSKSNQYPNTSLIQVEGVNTKEEVAWYCGKRLAYIYK-AKTKKNGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 389 ++Y +G +LGY+RS++ QYPN SLI++EGV ++E+ +Y GK++ + K +K+ KN + ++ WGK+ ++HG+SGVV+A+F NLPPK+MG VRV +YPSNI Sbjct: 3 KIYSKGVVLGYRRSQATQYPNISLIKIEGVVSREDSTFYLGKKVCLVSKVSKSAKNPTGHKISWGKICKTHGSSGVVQARFARNLPPKAMGAPVRVMLYPSNI 105
BLAST of CK739611 vs. ExPASy Swiss-Prot
Match: RL35A_XENLA (60S ribosomal protein L35a OS=Xenopus laevis GN=rpl35a PE=3 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 1.219e-25 Identity = 55/107 (51.40%), Postives = 74/107 (69.16%), Query Frame = 3 Query: 84 RLYVRGTILGYKRSKSNQYPNTSLIQVEGVNTKEEVAWYCGKRLAYIYKAKTKK-----NGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 389 RL+ + T GYKR NQ +T+L+++EGV ++E +Y GKR AY+YKAK + R IWGKV R+HGNSG+VRAKF+SNLP K++G R+RV +YPS I Sbjct: 4 RLWCKATFAGYKRGLRNQREHTALLKIEGVYARDETEFYFGKRCAYVYKAKNNTVTPGGKPNRTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
BLAST of CK739611 vs. ExPASy Swiss-Prot
Match: RL35A_ICTPU (60S ribosomal protein L35a OS=Ictalurus punctatus GN=rpl35a PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.593e-25 Identity = 56/107 (52.34%), Postives = 74/107 (69.16%), Query Frame = 3 Query: 84 RLYVRGTILGYKRSKSNQYPNTSLIQVEGVNTKEEVAWYCGKRLAYIYKAKTKK-----NGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 389 RL+ + GYKR NQ +T+L++VEGV ++ EV +Y GKR AY+YKAK + R IWGKV R+HGNSG+VRAKF SNLPPK++G R+RV +YPS + Sbjct: 4 RLWCKAIFAGYKRGLRNQREHTALLKVEGVYSRNEVDFYLGKRCAYVYKAKKTTVTPGGKPNKTRVIWGKVTRAHGNSGMVRAKFTSNLPPKAIGHRIRVMLYPSRV 110 The following BLAST results are available for this feature:
BLAST of CK739611 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739611 ID=CK739611; Name=CK739611; organism=Citrus sinensis; type=EST; length=487bpback to top |