CK739617
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739617 vs. ExPASy Swiss-Prot
Match: RS241_ARATH (40S ribosomal protein S24-1 OS=Arabidopsis thaliana GN=RPS24A PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 8.205e-26 Identity = 57/60 (95.00%), Postives = 60/60 (100.00%), Query Frame = 1 Query: 64 MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVF 243 MA+KAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMY+VKDPN+IFVF Sbjct: 1 MAEKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVF 60
BLAST of CK739617 vs. ExPASy Swiss-Prot
Match: RS242_ARATH (40S ribosomal protein S24-2 OS=Arabidopsis thaliana GN=RPS24B PE=2 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 2.639e-24 Identity = 54/60 (90.00%), Postives = 58/60 (96.67%), Query Frame = 1 Query: 64 MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVF 243 MA+KAVTIRTR FMTNRLL+RKQFVIDVLHPGRANVSKAELKEKLARMY+VKDPN+IF F Sbjct: 1 MAEKAVTIRTRNFMTNRLLARKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFCF 60
BLAST of CK739617 vs. ExPASy Swiss-Prot
Match: RS24_DICDI (40S ribosomal protein S24 OS=Dictyostelium discoideum GN=rps24 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 4.989e-15 Identity = 36/60 (60.00%), Postives = 49/60 (81.67%), Query Frame = 1 Query: 64 MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVF 243 M AV +RTRK +TNRLLSRKQFV++V+HPG+ANVSK +LK +A+++ V DP +IF+F Sbjct: 1 MDKAAVVVRTRKVLTNRLLSRKQFVVEVVHPGKANVSKKDLKTTIAKLHKVADPETIFLF 60
BLAST of CK739617 vs. ExPASy Swiss-Prot
Match: RS24_XENLA (40S ribosomal protein S24 OS=Xenopus laevis GN=rps24 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.510e-15 Identity = 40/55 (72.73%), Postives = 45/55 (81.82%), Query Frame = 1 Query: 79 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVF 243 VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA+MY P+ IFVF Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKT-TPDVIFVF 58
BLAST of CK739617 vs. ExPASy Swiss-Prot
Match: RS24_SPOFR (40S ribosomal protein S24 OS=Spodoptera frugiperda GN=RpS24 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.510e-15 Identity = 39/60 (65.00%), Postives = 47/60 (78.33%), Query Frame = 1 Query: 64 MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVF 243 M + TIRTRKFMTNRLL+RKQ V DVLHPG+ VSK E++EKLA+MY V P+ +FVF Sbjct: 1 MTEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVVFVF 59
BLAST of CK739617 vs. ExPASy Swiss-Prot
Match: RS24_RAT (40S ribosomal protein S24 OS=Rattus norvegicus GN=Rps24 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.510e-15 Identity = 40/55 (72.73%), Postives = 45/55 (81.82%), Query Frame = 1 Query: 79 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVF 243 VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA+MY P+ IFVF Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKT-TPDVIFVF 58
BLAST of CK739617 vs. ExPASy Swiss-Prot
Match: RS24_PONAB (40S ribosomal protein S24 OS=Pongo abelii GN=RPS24 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.510e-15 Identity = 40/55 (72.73%), Postives = 45/55 (81.82%), Query Frame = 1 Query: 79 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVF 243 VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA+MY P+ IFVF Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKT-TPDVIFVF 58
BLAST of CK739617 vs. ExPASy Swiss-Prot
Match: RS24_MOUSE (40S ribosomal protein S24 OS=Mus musculus GN=Rps24 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.510e-15 Identity = 40/55 (72.73%), Postives = 45/55 (81.82%), Query Frame = 1 Query: 79 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVF 243 VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA+MY P+ IFVF Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKT-TPDVIFVF 58
BLAST of CK739617 vs. ExPASy Swiss-Prot
Match: RS24_MESAU (40S ribosomal protein S24 OS=Mesocricetus auratus GN=RPS24 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.510e-15 Identity = 40/55 (72.73%), Postives = 45/55 (81.82%), Query Frame = 1 Query: 79 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVF 243 VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA+MY P+ IFVF Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKT-TPDVIFVF 58
BLAST of CK739617 vs. ExPASy Swiss-Prot
Match: RS24_HUMAN (40S ribosomal protein S24 OS=Homo sapiens GN=RPS24 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.510e-15 Identity = 40/55 (72.73%), Postives = 45/55 (81.82%), Query Frame = 1 Query: 79 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVF 243 VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA+MY P+ IFVF Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKT-TPDVIFVF 58 The following BLAST results are available for this feature:
BLAST of CK739617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739617 ID=CK739617; Name=CK739617; organism=Citrus sinensis; type=EST; length=245bpback to top |