CK739671

Overview
NameCK739671
Unique NameCK739671
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length286
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739671 vs. ExPASy Swiss-Prot
Match: SPK1_CAEEL (Serine/threonine-protein kinase spk-1 OS=Caenorhabditis elegans GN=spk-1 PE=1 SV=3)

HSP 1 Score: 121.709 bits (304), Expect = 1.133e-27
Identity = 59/92 (64.13%), Postives = 69/92 (75.00%), Query Frame = 1
Query:    4 KLGWGHFSTVWLTWDTQTSHYVALKVQKSAQHYTEAAMDEIKILKQIADGDPDDKKC--VVKLLDHFKHSGPNGQHVCMGFEYLGDNLLTLI 273
            KLGWGHFSTVWL WDTQ   +VA+K+ KSA+HYTEAA+DEIK+L  +   DP+D  C  VV+LLD F  +G NGQHV M FE LG NLL LI
Sbjct:  427 KLGWGHFSTVWLAWDTQDKRFVAMKIVKSAEHYTEAALDEIKLLLSVRSADPNDIGCHKVVQLLDEFTVTGINGQHVAMVFEVLGCNLLKLI 518          
BLAST of CK739671 vs. ExPASy Swiss-Prot
Match: SPK1_CAEBR (Serine/threonine-protein kinase spk-1 OS=Caenorhabditis briggsae GN=spk-1 PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.933e-27
Identity = 58/92 (63.04%), Postives = 68/92 (73.91%), Query Frame = 1
Query:    4 KLGWGHFSTVWLTWDTQTSHYVALKVQKSAQHYTEAAMDEIKILKQIADGDPDDKKC--VVKLLDHFKHSGPNGQHVCMGFEYLGDNLLTLI 273
            KLGWGHFSTVWL WDTQ   + A+K+ KSA+HYTEAA+DEIK+L  +   DP+D  C  VV+LLD F  +G NGQHV M FE LG NLL LI
Sbjct:  139 KLGWGHFSTVWLAWDTQEKRFTAMKIVKSAEHYTEAALDEIKLLLSVRGADPEDTGCHKVVQLLDEFTVTGINGQHVAMVFEVLGCNLLKLI 230          
BLAST of CK739671 vs. ExPASy Swiss-Prot
Match: SRPK2_MOUSE (Serine/threonine-protein kinase SRPK2 OS=Mus musculus GN=Srpk2 PE=1 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 4.305e-27
Identity = 59/92 (64.13%), Postives = 68/92 (73.91%), Query Frame = 1
Query:    4 KLGWGHFSTVWLTWDTQTSHYVALKVQKSAQHYTEAAMDEIKILKQIADGDPDD--KKCVVKLLDHFKHSGPNGQHVCMGFEYLGDNLLTLI 273
            KLGWGHFSTVWL WD Q   +VA+KV KSAQHYTE A+DEIK+LK + + DP D  K  VV+L+D FK SG NG HVCM FE LG +LL  I
Sbjct:   84 KLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALDEIKLLKCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWI 175          
BLAST of CK739671 vs. ExPASy Swiss-Prot
Match: SRPK2_HUMAN (Serine/threonine-protein kinase SRPK2 OS=Homo sapiens GN=SRPK2 PE=1 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 4.305e-27
Identity = 59/92 (64.13%), Postives = 68/92 (73.91%), Query Frame = 1
Query:    4 KLGWGHFSTVWLTWDTQTSHYVALKVQKSAQHYTEAAMDEIKILKQIADGDPDD--KKCVVKLLDHFKHSGPNGQHVCMGFEYLGDNLLTLI 273
            KLGWGHFSTVWL WD Q   +VA+KV KSAQHYTE A+DEIK+LK + + DP D  K  VV+L+D FK SG NG HVCM FE LG +LL  I
Sbjct:   86 KLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALDEIKLLKCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWI 177          
BLAST of CK739671 vs. ExPASy Swiss-Prot
Match: SRPK1_PONAB (Serine/threonine-protein kinase SRPK1 OS=Pongo abelii GN=SRPK1 PE=2 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 4.305e-27
Identity = 56/92 (60.87%), Postives = 71/92 (77.17%), Query Frame = 1
Query:    4 KLGWGHFSTVWLTWDTQTSHYVALKVQKSAQHYTEAAMDEIKILKQIADGDPDD--KKCVVKLLDHFKHSGPNGQHVCMGFEYLGDNLLTLI 273
            KLGWGHFSTVWL+WD Q   +VA+KV KSA+HYTE A+DEI++LK + + DP+D  ++ VV+LLD FK SG NG H+CM FE LG +LL  I
Sbjct:   85 KLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWI 176          
BLAST of CK739671 vs. ExPASy Swiss-Prot
Match: SRPK1_HUMAN (Serine/threonine-protein kinase SRPK1 OS=Homo sapiens GN=SRPK1 PE=1 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 4.305e-27
Identity = 56/92 (60.87%), Postives = 71/92 (77.17%), Query Frame = 1
Query:    4 KLGWGHFSTVWLTWDTQTSHYVALKVQKSAQHYTEAAMDEIKILKQIADGDPDD--KKCVVKLLDHFKHSGPNGQHVCMGFEYLGDNLLTLI 273
            KLGWGHFSTVWL+WD Q   +VA+KV KSA+HYTE A+DEI++LK + + DP+D  ++ VV+LLD FK SG NG H+CM FE LG +LL  I
Sbjct:   85 KLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWI 176          
BLAST of CK739671 vs. ExPASy Swiss-Prot
Match: SRPK1_MOUSE (Serine/threonine-protein kinase SRPK1 OS=Mus musculus GN=Srpk1 PE=1 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 9.592e-27
Identity = 56/92 (60.87%), Postives = 70/92 (76.09%), Query Frame = 1
Query:    4 KLGWGHFSTVWLTWDTQTSHYVALKVQKSAQHYTEAAMDEIKILKQIADGDPDDK--KCVVKLLDHFKHSGPNGQHVCMGFEYLGDNLLTLI 273
            KLGWGHFSTVWL+WD Q   +VA+KV KSA+HYTE A+DEI++LK + + DP+D   + VV+LLD FK SG NG H+CM FE LG +LL  I
Sbjct:   85 KLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNGEMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWI 176          
BLAST of CK739671 vs. ExPASy Swiss-Prot
Match: DSK1_SCHPO (Protein kinase dsk1 OS=Schizosaccharomyces pombe GN=dsk1 PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 3.645e-26
Identity = 55/93 (59.14%), Postives = 70/93 (75.27%), Query Frame = 1
Query:    4 KLGWGHFSTVWLTWDTQTSHYVALKVQKSAQHYTEAAMDEIKILKQIADGDPD--DKKCVVKLLDHFKHSGPNGQHVCMGFEYLGDNLLTLIK 276
            KLGWGHFSTVWL +D      VALKV +SA+HY E ++DEI+IL++I +GD     KK ++ LLD+F H GPNG HVCM FE LG+NLL+LI+
Sbjct:   86 KLGWGHFSTVWLAYDRAAKRRVALKVVRSAEHYRETSIDEIRILQKIREGDEKHLGKKHIISLLDYFVHRGPNGAHVCMVFEVLGENLLSLIQ 178          
BLAST of CK739671 vs. ExPASy Swiss-Prot
Match: SRPK3_MOUSE (Serine/threonine-protein kinase SRPK3 OS=Mus musculus GN=Srpk3 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.120e-26
Identity = 57/92 (61.96%), Postives = 65/92 (70.65%), Query Frame = 1
Query:    4 KLGWGHFSTVWLTWDTQTSHYVALKVQKSAQHYTEAAMDEIKILKQIADGDPDDKK--CVVKLLDHFKHSGPNGQHVCMGFEYLGDNLLTLI 273
            KLGWGHFSTVWL WD Q   +VALKV KSA HYTE A+DEIK+LK + D DP D K   +V+L+D F+ SG NG HVCM  E LG  LL  I
Sbjct:   83 KLGWGHFSTVWLCWDIQRKRFVALKVVKSAGHYTETAVDEIKLLKCVRDSDPSDPKRETIVQLIDDFRISGVNGVHVCMVLEVLGHQLLKWI 174          
BLAST of CK739671 vs. ExPASy Swiss-Prot
Match: SRPK3_HUMAN (Serine/threonine-protein kinase SRPK3 OS=Homo sapiens GN=SRPK3 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.120e-26
Identity = 57/92 (61.96%), Postives = 65/92 (70.65%), Query Frame = 1
Query:    4 KLGWGHFSTVWLTWDTQTSHYVALKVQKSAQHYTEAAMDEIKILKQIADGDPDDKK--CVVKLLDHFKHSGPNGQHVCMGFEYLGDNLLTLI 273
            KLGWGHFSTVWL WD Q   +VALKV KSA HYTE A+DEIK+LK + D DP D K   +V+L+D F+ SG NG HVCM  E LG  LL  I
Sbjct:   84 KLGWGHFSTVWLCWDIQRKRFVALKVVKSAGHYTETAVDEIKLLKCVRDSDPSDPKRETIVQLIDDFRISGVNGVHVCMVLEVLGHQLLKWI 175          
The following BLAST results are available for this feature:
BLAST of CK739671 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
SPK1_CAEEL1.133e-2764.13Serine/threonine-protein kinase spk-1 OS=Caenorhab... [more]
SPK1_CAEBR1.933e-2763.04Serine/threonine-protein kinase spk-1 OS=Caenorhab... [more]
SRPK2_MOUSE4.305e-2764.13Serine/threonine-protein kinase SRPK2 OS=Mus muscu... [more]
SRPK2_HUMAN4.305e-2764.13Serine/threonine-protein kinase SRPK2 OS=Homo sapi... [more]
SRPK1_PONAB4.305e-2760.87Serine/threonine-protein kinase SRPK1 OS=Pongo abe... [more]
SRPK1_HUMAN4.305e-2760.87Serine/threonine-protein kinase SRPK1 OS=Homo sapi... [more]
SRPK1_MOUSE9.592e-2760.87Serine/threonine-protein kinase SRPK1 OS=Mus muscu... [more]
DSK1_SCHPO3.645e-2659.14Protein kinase dsk1 OS=Schizosaccharomyces pombe G... [more]
SRPK3_MOUSE8.120e-2661.96Serine/threonine-protein kinase SRPK3 OS=Mus muscu... [more]
SRPK3_HUMAN8.120e-2661.96Serine/threonine-protein kinase SRPK3 OS=Homo sapi... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_6058 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE58C05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739671 ID=CK739671; Name=CK739671; organism=Citrus sinensis; type=EST; length=286bp
AGCAAGCTTGGCTGGGGCCATTTCTCTACTGTTTGGCTCACTTGGGACAC
TCAAACTTCTCATTATGTAGCTTTGAAAGTCCAGAAGAGTGCTCAGCACT
ACACTGAGGCAGCCATGGACGAGATAAAGATCCTCAAGCAGATCGCTGAT
GGAGACCCAGATGATAAAAAGTGTGTGGTGAAGCTTTTAGATCACTTTAA
GCATTCAGGGCCCAATGGGCAGCACGTTTGTATGGGTTTTGAGTACTTGG
GAGATAATCTTTTGACGCTTATTAAGTATACTGATT
back to top