CK739676
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739676 vs. ExPASy Swiss-Prot
Match: HDA19_ARATH (Histone deacetylase 19 OS=Arabidopsis thaliana GN=HDA19 PE=1 SV=2) HSP 1 Score: 233.417 bits (594), Expect = 2.691e-61 Identity = 106/113 (93.81%), Postives = 111/113 (98.23%), Query Frame = 2 Query: 2 DDGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYQTGVALGVEGDDKMPQHEYYEYFGPDY 340 DDGIDDESYH LFKPI+GKVME+FRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCY+TGVALGVE +DKMP+HEYYEYFGPDY Sbjct: 237 DDGIDDESYHLLFKPIMGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVEDKMPEHEYYEYFGPDY 349
BLAST of CK739676 vs. ExPASy Swiss-Prot
Match: HDA19_MAIZE (Probable histone deacetylase 19 OS=Zea mays PE=2 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 8.103e-58 Identity = 102/113 (90.27%), Postives = 108/113 (95.58%), Query Frame = 2 Query: 2 DDGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYQTGVALGVEGDDKMPQHEYYEYFGPDY 340 DDGIDDESY LFKPI+GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECV++MRSFNVPLLLLGGGGYTIRNVARCWCY+TGVALG E +DKMP +EYYEYFGPDY Sbjct: 242 DDGIDDESYQSLFKPIMGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGQEPEDKMPVNEYYEYFGPDY 354
BLAST of CK739676 vs. ExPASy Swiss-Prot
Match: HDA6_ARATH (Histone deacetylase 6 OS=Arabidopsis thaliana GN=HDA6 PE=1 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 1.253e-50 Identity = 85/113 (75.22%), Postives = 106/113 (93.81%), Query Frame = 2 Query: 2 DDGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYQTGVALGVEGDDKMPQHEYYEYFGPDY 340 +DG+DDES+ LF+P+I KVMEV++P AVVLQCGADSLSGDRLGCFNLS+KGHA+C++F+RS+NVPL++LGGGGYTIRNVARCWCY+T VA+GVE D+K+P +EY+EYFGPDY Sbjct: 241 NDGMDDESFRSLFRPLIQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSYNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDY 353
BLAST of CK739676 vs. ExPASy Swiss-Prot
Match: HDAC1_CHICK (Histone deacetylase 1 OS=Gallus gallus GN=HDAC1 PE=2 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 1.098e-46 Identity = 80/112 (71.43%), Postives = 100/112 (89.29%), Query Frame = 2 Query: 5 DGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYQTGVALGVEGDDKMPQHEYYEYFGPDY 340 DGIDDESY +FKP+I KVME F+P AVVLQCG+DSLSGDRLGCFNL+IKGHA+CV+F++SFN+P+L+LGGGGYTIRNVARCW Y+T VAL E +++P ++Y+EYFGPD+ Sbjct: 230 DGIDDESYEAIFKPVISKVMETFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDF 341
BLAST of CK739676 vs. ExPASy Swiss-Prot
Match: HDAC1_RAT (Histone deacetylase 1 OS=Rattus norvegicus GN=Hdac1 PE=2 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 1.872e-46 Identity = 79/112 (70.54%), Postives = 101/112 (90.18%), Query Frame = 2 Query: 5 DGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYQTGVALGVEGDDKMPQHEYYEYFGPDY 340 DGIDDESY +FKP++ KVME+F+P AVVLQCG+DSLSGDRLGCFNL+IKGHA+CV+F++SFN+P+L+LGGGGYTIRNVARCW Y+T VAL E +++P ++Y+EYFGPD+ Sbjct: 230 DGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDF 341
BLAST of CK739676 vs. ExPASy Swiss-Prot
Match: HDAC1_PONAB (Histone deacetylase 1 OS=Pongo abelii GN=HDAC1 PE=2 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 1.872e-46 Identity = 79/112 (70.54%), Postives = 101/112 (90.18%), Query Frame = 2 Query: 5 DGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYQTGVALGVEGDDKMPQHEYYEYFGPDY 340 DGIDDESY +FKP++ KVME+F+P AVVLQCG+DSLSGDRLGCFNL+IKGHA+CV+F++SFN+P+L+LGGGGYTIRNVARCW Y+T VAL E +++P ++Y+EYFGPD+ Sbjct: 230 DGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDF 341
BLAST of CK739676 vs. ExPASy Swiss-Prot
Match: HDAC1_MOUSE (Histone deacetylase 1 OS=Mus musculus GN=Hdac1 PE=1 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 1.872e-46 Identity = 79/112 (70.54%), Postives = 101/112 (90.18%), Query Frame = 2 Query: 5 DGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYQTGVALGVEGDDKMPQHEYYEYFGPDY 340 DGIDDESY +FKP++ KVME+F+P AVVLQCG+DSLSGDRLGCFNL+IKGHA+CV+F++SFN+P+L+LGGGGYTIRNVARCW Y+T VAL E +++P ++Y+EYFGPD+ Sbjct: 230 DGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDF 341
BLAST of CK739676 vs. ExPASy Swiss-Prot
Match: HDAC1_HUMAN (Histone deacetylase 1 OS=Homo sapiens GN=HDAC1 PE=1 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 1.872e-46 Identity = 79/112 (70.54%), Postives = 101/112 (90.18%), Query Frame = 2 Query: 5 DGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYQTGVALGVEGDDKMPQHEYYEYFGPDY 340 DGIDDESY +FKP++ KVME+F+P AVVLQCG+DSLSGDRLGCFNL+IKGHA+CV+F++SFN+P+L+LGGGGYTIRNVARCW Y+T VAL E +++P ++Y+EYFGPD+ Sbjct: 230 DGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDF 341
BLAST of CK739676 vs. ExPASy Swiss-Prot
Match: HDAC1_BOVIN (Histone deacetylase 1 OS=Bos taurus GN=HDAC1 PE=2 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 1.872e-46 Identity = 79/112 (70.54%), Postives = 101/112 (90.18%), Query Frame = 2 Query: 5 DGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYQTGVALGVEGDDKMPQHEYYEYFGPDY 340 DGIDDESY +FKP++ KVME+F+P AVVLQCG+DSLSGDRLGCFNL+IKGHA+CV+F++SFN+P+L+LGGGGYTIRNVARCW Y+T VAL E +++P ++Y+EYFGPD+ Sbjct: 230 DGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDF 341
BLAST of CK739676 vs. ExPASy Swiss-Prot
Match: HDA1A_XENLA (Probable histone deacetylase 1-A OS=Xenopus laevis GN=hdac1-A PE=1 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 1.872e-46 Identity = 80/112 (71.43%), Postives = 101/112 (90.18%), Query Frame = 2 Query: 5 DGIDDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYQTGVALGVEGDDKMPQHEYYEYFGPDY 340 DGIDDESY +FKP++ KVME+F+P AVVLQCGADSLSGDRLGCFNL+IKGHA+CV+F+++FN+PLL+LGGGGYTIRNVARCW Y+T VAL E +++P ++Y+EYFGPD+ Sbjct: 230 DGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEFIKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDSEIPNELPYNDYFEYFGPDF 341 The following BLAST results are available for this feature:
BLAST of CK739676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK739676 ID=CK739676; Name=CK739676; organism=Citrus sinensis; type=EST; length=341bpback to top |