CK739697
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739697 vs. ExPASy Swiss-Prot
Match: RGLG2_ARATH (E3 ubiquitin-protein ligase RGLG2 OS=Arabidopsis thaliana GN=RGLG2 PE=1 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 3.041e-69 Identity = 106/135 (78.52%), Postives = 120/135 (88.89%), Query Frame = 2 Query: 92 GR*PRSIDTVRGCLSPQEQKTVDAIVKASELPLSIVLVGVGDGPWDMMKEFDDNIPARAFDNFQFVNFTEIMSKNHDQTRKETEFALSALMEIPSQYKATIELNILGRRKGNVPERGALPPPVYGATTSFHSPKP 496 G+ RS+DT G LSPQEQKTVDAIV+AS+LPLSIVLVGVGDGPWDMM+EFDDNIPARAFDNFQFVNFTEIM+KN Q+ KETEFALSALMEIP QYKATIELN+LGRR G +PER LPPP+ G ++S++SPKP Sbjct: 253 GQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLVGVGDGPWDMMREFDDNIPARAFDNFQFVNFTEIMAKNKAQSLKETEFALSALMEIPQQYKATIELNLLGRRNGYIPERFPLPPPMRGGSSSYNSPKP 387 HSP 2 Score: 65.4698 bits (158), Expect = 3.041e-69 Identity = 30/34 (88.24%), Postives = 34/34 (100.00%), Query Frame = 1 Query: 1 PTSFAPVIEMAMSIVEQSGGQYHVLLIIADGQVT 102 PTSFAP+I+MAM+IVEQSGGQYHVL+IIADGQVT Sbjct: 223 PTSFAPIIDMAMTIVEQSGGQYHVLVIIADGQVT 256
BLAST of CK739697 vs. ExPASy Swiss-Prot
Match: RGLG1_ARATH (E3 ubiquitin-protein ligase RGLG1 OS=Arabidopsis thaliana GN=RGLG1 PE=1 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.046e-66 Identity = 107/134 (79.85%), Postives = 116/134 (86.57%), Query Frame = 2 Query: 92 GR*PRSIDTVRGCLSPQEQKTVDAIVKASELPLSIVLVGVGDGPWDMMKEFDDNIPARAFDNFQFVNFTEIMSKNHDQTRKETEFALSALMEIPSQYKATIELNILGRRKGNVPERGALPPPVYGATTSFHSPK 493 G+ RS+DT G LSPQEQKTVDAIVKAS LPLSIVLVGVGDGPWDMM+EFDDNIPARAFDNFQFVNFTEIMSKN DQ+RKETEFALSALMEIP QYKATIELN+LG R GN+P+R LPPPV +SF S + Sbjct: 287 GQVTRSVDTEHGRLSPQEQKTVDAIVKASTLPLSIVLVGVGDGPWDMMQEFDDNIPARAFDNFQFVNFTEIMSKNKDQSRKETEFALSALMEIPPQYKATIELNLLGVRNGNIPQRIPLPPPVQSG-SSFSSSR 419 HSP 2 Score: 63.929 bits (154), Expect = 1.046e-66 Identity = 29/34 (85.29%), Postives = 33/34 (97.06%), Query Frame = 1 Query: 1 PTSFAPVIEMAMSIVEQSGGQYHVLLIIADGQVT 102 PTSFAP+IEMAM++VEQS GQYHVL+IIADGQVT Sbjct: 257 PTSFAPIIEMAMTVVEQSSGQYHVLVIIADGQVT 290
BLAST of CK739697 vs. ExPASy Swiss-Prot
Match: CPNA2_CAEEL (Copine domain-containing protein 2 OS=Caenorhabditis elegans GN=cpna-2 PE=2 SV=3) HSP 1 Score: 98.5969 bits (244), Expect = 3.918e-26 Identity = 49/83 (59.04%), Postives = 59/83 (71.08%), Query Frame = 2 Query: 161 AIVKASELPLSIVLVGVGDGPWDMMKEFDDNIPARAFDNFQFVNFTEIMSKNHDQTRKETEFALSALMEIPSQYKATIELNIL 409 AI AS PLSI++VGVGDGPW+MM FDDNIP R FDNF FV+F ++M + + FAL+ALMEIP QYKA EL +L Sbjct: 7463 AIAAASHYPLSIIMVGVGDGPWNMMGRFDDNIPKRLFDNFHFVDFHKVM---FNAPNADASFALNALMEIPDQYKAIKELGLL 7542 HSP 2 Score: 38.891 bits (89), Expect = 3.918e-26 Identity = 17/34 (50.00%), Postives = 26/34 (76.47%), Query Frame = 1 Query: 1 PTSFAPVIEMAMSIVEQSGGQYHVLLIIADGQVT 102 PT+F P+I+ A+ I ++ YH+L+I+ADGQVT Sbjct: 7423 PTNFVPLIDRAIEICKEKHS-YHILVIVADGQVT 7455 The following BLAST results are available for this feature:
BLAST of CK739697 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK739697 ID=CK739697; Name=CK739697; organism=Citrus sinensis; type=EST; length=498bpback to top |