CK739701

Overview
NameCK739701
Unique NameCK739701
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length419
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739701 vs. ExPASy Swiss-Prot
Match: CAHC_PEA (Carbonic anhydrase, chloroplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 2.442e-54
Identity = 99/122 (81.15%), Postives = 107/122 (87.70%), Query Frame = 3
Query:   48 LHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV 413
            LHLKVSNIVVIGHSACGGIKGL+SF FDG  STDFIE+WVKIG+PAK+KV  +HGD PF + CT+CEKEAVN SL NLLTYPFVREGLVNKTLALKGGYYDFV GSFELWGL+F LS   SV
Sbjct:  207 LHLKVSNIVVIGHSACGGIKGLLSFPFDGTYSTDFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNASLGNLLTYPFVREGLVNKTLALKGGYYDFVKGSFELWGLEFGLSSTFSV 328          
BLAST of CK739701 vs. ExPASy Swiss-Prot
Match: CAHC_TOBAC (Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 1.026e-52
Identity = 100/122 (81.97%), Postives = 105/122 (86.07%), Query Frame = 3
Query:   48 LHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV 413
            LHLKV NIVVIGHSACGGIKGLMS   DG+ ST FIEDWVKIG+PAK+KV  EH DK F DQCT CEKEAVNVSL NLLTYPFVREGLV KTLALKGG+YDFVNG FELWGL+F LSP LSV
Sbjct:  200 LHLKVENIVVIGHSACGGIKGLMSLPADGSESTAFIEDWVKIGLPAKAKVQGEHVDKCFADQCTACEKEAVNVSLGNLLTYPFVREGLVKKTLALKGGHYDFVNGGFELWGLEFGLSPSLSV 321          
BLAST of CK739701 vs. ExPASy Swiss-Prot
Match: CAHC_ARATH (Carbonic anhydrase, chloroplastic OS=Arabidopsis thaliana GN=CA1 PE=1 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 1.134e-51
Identity = 98/122 (80.33%), Postives = 105/122 (86.07%), Query Frame = 3
Query:   48 LHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV 413
            LHLKV NIVVIGHSACGGIKGLMSF  DGNNSTDFIEDWVKI +PAKSKV++E GD  F DQC  CE+EAVNVSL+NLLTYPFVREGLV  TLALKGGYYDFV G+FELWGL+F LS   SV
Sbjct:  215 LHLKVENIVVIGHSACGGIKGLMSFPLDGNNSTDFIEDWVKICLPAKSKVISELGDSAFEDQCGRCEREAVNVSLANLLTYPFVREGLVKGTLALKGGYYDFVKGAFELWGLEFGLSETSSV 336          
BLAST of CK739701 vs. ExPASy Swiss-Prot
Match: CAHC_SPIOL (Carbonic anhydrase, chloroplastic OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 200.675 bits (509), Expect = 1.935e-51
Identity = 96/122 (78.69%), Postives = 105/122 (86.07%), Query Frame = 3
Query:   48 LHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV 413
            LHLKV NIVVIGHSACGGIKGLMSF   G  +TDFIEDWVKI +PAK KVL EHG+  F +QCT+CEKEAVNVSL NLLTYPFVR+GLV KTLAL+GGYYDFVNGSFELWGL++ LSP  SV
Sbjct:  198 LHLKVENIVVIGHSACGGIKGLMSFPDAGPTTTDFIEDWVKICLPAKHKVLAEHGNATFAEQCTHCEKEAVNVSLGNLLTYPFVRDGLVKKTLALQGGYYDFVNGSFELWGLEYGLSPSQSV 319          
BLAST of CK739701 vs. ExPASy Swiss-Prot
Match: CAH2_ARATH (Carbonic anhydrase 2 OS=Arabidopsis thaliana GN=CA2 PE=1 SV=2)

HSP 1 Score: 196.823 bits (499), Expect = 2.794e-50
Identity = 96/122 (78.69%), Postives = 102/122 (83.61%), Query Frame = 3
Query:   48 LHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV 413
            LHLKV NIVVIGHSACGGIKGLMSF  DGNNSTDFIEDWVKI +PAKSKVL E     F DQC  CE+EAVNVSL+NLLTYPFVREG+V  TLALKGGYYDFVNGSFELW L F +SP  S+
Sbjct:  138 LHLKVENIVVIGHSACGGIKGLMSFPLDGNNSTDFIEDWVKICLPAKSKVLAESESSAFEDQCGRCEREAVNVSLANLLTYPFVREGVVKGTLALKGGYYDFVNGSFELWELQFGISPVHSI 259          
BLAST of CK739701 vs. ExPASy Swiss-Prot
Match: CAHX_FLABI (Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 1.298e-47
Identity = 90/122 (73.77%), Postives = 99/122 (81.15%), Query Frame = 3
Query:   48 LHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV 413
            LHLKV  I VIGHS CGGIKGLM+F  +G +STDFIEDWVK+ +PAKSKV+ EH      DQC  CEKEAVNVSL NLLTYPFVR+GL NKTLALKGG+YDFVNG+FELW LDF LS P SV
Sbjct:  209 LHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNKTLALKGGHYDFVNGTFELWALDFGLSSPTSV 330          
BLAST of CK739701 vs. ExPASy Swiss-Prot
Match: CAHX_FLAPR (Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 4.931e-47
Identity = 89/122 (72.95%), Postives = 98/122 (80.33%), Query Frame = 3
Query:   48 LHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV 413
            LHLKV  I VIGHS CGGIKGLM+F  +G +STDFIEDWVK+ +PAKSKV+ EH      DQC  CEKEAVNVSL NLLTYPFVR+GL N TLALKGG+YDFVNG+FELW LDF LS P SV
Sbjct:  208 LHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELWALDFGLSSPTSV 329          
BLAST of CK739701 vs. ExPASy Swiss-Prot
Match: CAHX_FLABR (Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 4.931e-47
Identity = 89/122 (72.95%), Postives = 98/122 (80.33%), Query Frame = 3
Query:   48 LHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV 413
            LHLKV  I VIGHS CGGIKGLM+F  +G +STDFIEDWVK+ +PAKSKV+ EH      DQC  CEKEAVNVSL NLLTYPFVR+GL N TLALKGG+YDFVNG+FELW LDF LS P SV
Sbjct:  209 LHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELWALDFGLSSPTSV 330          
BLAST of CK739701 vs. ExPASy Swiss-Prot
Match: CAH1_FLALI (Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 4.931e-47
Identity = 89/122 (72.95%), Postives = 98/122 (80.33%), Query Frame = 3
Query:   48 LHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV 413
            LHLKV  I VIGHS CGGIKGLM+F  +G +STDFIEDWVK+ +PAKSKV+ EH      DQC  CEKEAVNVSL NLLTYPFVR+GL N TLALKGG+YDFVNG+FELW LDF LS P SV
Sbjct:  209 LHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVQCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELWALDFGLSSPTSV 330          
BLAST of CK739701 vs. ExPASy Swiss-Prot
Match: CAH2_FLALI (Carbonic anhydrase 2 (Fragment) OS=Flaveria linearis PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 2.291e-44
Identity = 84/120 (70.00%), Postives = 95/120 (79.17%), Query Frame = 3
Query:   48 LHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPL 407
            LHLKV NIVVIGHS CGGIKGLMS   DG  ++DFIE WVK+G+PAKSKV     +  F D CT CEKEAVNVSL NLLTYPFVR+ LVNK L+LKG +YDFVNG+F+LW LDF +SP L
Sbjct:   69 LHLKVENIVVIGHSCCGGIKGLMSIPDDGTPASDFIEQWVKLGLPAKSKVKANCNNLEFADLCTKCEKEAVNVSLGNLLTYPFVRDALVNKKLSLKGAHYDFVNGAFDLWNLDFGISPSL 188          
The following BLAST results are available for this feature:
BLAST of CK739701 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
CAHC_PEA2.442e-5481.15Carbonic anhydrase, chloroplastic OS=Pisum sativum... [more]
CAHC_TOBAC1.026e-5281.97Carbonic anhydrase, chloroplastic OS=Nicotiana tab... [more]
CAHC_ARATH1.134e-5180.33Carbonic anhydrase, chloroplastic OS=Arabidopsis t... [more]
CAHC_SPIOL1.935e-5178.69Carbonic anhydrase, chloroplastic OS=Spinacia oler... [more]
CAH2_ARATH2.794e-5078.69Carbonic anhydrase 2 OS=Arabidopsis thaliana GN=CA... [more]
CAHX_FLABI1.298e-4773.77Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2[more]
CAHX_FLAPR4.931e-4772.95Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1[more]
CAHX_FLABR4.931e-4772.95Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1[more]
CAH1_FLALI4.931e-4772.95Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=... [more]
CAH2_FLALI2.291e-4470.00Carbonic anhydrase 2 (Fragment) OS=Flaveria linear... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6088 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE59F10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739701 ID=CK739701; Name=CK739701; organism=Citrus sinensis; type=EST; length=419bp
ATCAGACTAAATATGCTGGAGTTGGAGCTGCTGTCGAGTATGCAGTTTTG
CATCTCAAGGTTTCAAACATTGTGGTCATTGGGCACAGCGCCTGTGGTGG
CATCAAAGGACTCATGTCTTTCACATTTGATGGAAACAACTCCACCGATT
TCATTGAAGACTGGGTGAAAATTGGCATCCCTGCCAAGTCTAAGGTGTTA
ACAGAGCATGGTGACAAGCCTTTTGGAGACCAATGCACATACTGTGAAAA
GGAGGCGGTGAATGTGTCCCTCAGTAATCTGCTAACGTATCCATTTGTGA
GAGAAGGCTTGGTGAACAAAACTCTGGCACTCAAGGGTGGTTACTATGAT
TTCGTTAATGGATCATTCGAGCTCTGGGGTCTCGACTTTAGCCTTTCTCC
TCCACTCTCCGTATGAACA
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