CK739787
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK739787 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 2.291e-28 Identity = 56/59 (94.92%), Postives = 59/59 (100.00%), Query Frame = 3 Query: 3 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLA 179 GLDYLGNPSL+HAQSILAIWACQVVLMGA+EGYR+AGGPLGEVTDPLYPGGSFDPLGLA Sbjct: 144 GLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLA 202
BLAST of CK739787 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 2.291e-28 Identity = 57/59 (96.61%), Postives = 59/59 (100.00%), Query Frame = 3 Query: 3 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLA 179 GLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLA Sbjct: 83 GLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA 141
BLAST of CK739787 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 2.291e-28 Identity = 57/59 (96.61%), Postives = 59/59 (100.00%), Query Frame = 3 Query: 3 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLA 179 GLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLA Sbjct: 132 GLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA 190
BLAST of CK739787 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 2.992e-28 Identity = 56/59 (94.92%), Postives = 59/59 (100.00%), Query Frame = 3 Query: 3 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLA 179 GLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGPLGEVTDP+YPGGSFDPLGLA Sbjct: 145 GLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLA 203
BLAST of CK739787 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 2.992e-28 Identity = 56/59 (94.92%), Postives = 59/59 (100.00%), Query Frame = 3 Query: 3 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLA 179 GLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLA Sbjct: 151 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA 209
BLAST of CK739787 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 3.908e-28 Identity = 58/59 (98.31%), Postives = 58/59 (98.31%), Query Frame = 3 Query: 3 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLA 179 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA Sbjct: 142 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLA 200
BLAST of CK739787 vs. ExPASy Swiss-Prot
Match: CB21_MAIZE (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 3.908e-28 Identity = 58/59 (98.31%), Postives = 58/59 (98.31%), Query Frame = 3 Query: 3 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLA 179 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA Sbjct: 139 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLA 197
BLAST of CK739787 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 5.104e-28 Identity = 57/59 (96.61%), Postives = 58/59 (98.31%), Query Frame = 3 Query: 3 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLA 179 GLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA Sbjct: 144 GLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLA 202
BLAST of CK739787 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 5.104e-28 Identity = 57/59 (96.61%), Postives = 58/59 (98.31%), Query Frame = 3 Query: 3 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLA 179 GLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA Sbjct: 142 GLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLA 200
BLAST of CK739787 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 6.666e-28 Identity = 56/59 (94.92%), Postives = 58/59 (98.31%), Query Frame = 3 Query: 3 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLA 179 GLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA Sbjct: 144 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLA 202 The following BLAST results are available for this feature:
BLAST of CK739787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739787 ID=CK739787; Name=CK739787; organism=Citrus sinensis; type=EST; length=179bpback to top |