CK739807

Overview
NameCK739807
Unique NameCK739807
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length612
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739807 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.007e-18
Identity = 30/71 (42.25%), Postives = 42/71 (59.15%), Query Frame = 2
Query:  143 GFLDIVANLIAFWFPVRQDALGIEAFTQEKFPVLFKWIANITKIDLVNECRPPREKHLAFVKAHIEGLKSA 355
            G +DI A  IAFW P+ Q+  G++ FT EKFP+L+KW         V+E  PPR+   A+ KA  E L ++
Sbjct:  154 GLVDIAAVFIAFWIPIFQEIAGLQLFTSEKFPILYKWSQEFLNHPFVHEVLPPRDPLFAYFKARYESLSAS 224          

HSP 2 Score: 42.743 bits (99), Expect = 6.007e-18
Identity = 23/47 (48.94%), Postives = 31/47 (65.96%), Query Frame = 1
Query:    1 FIDEKVLATGWKANFG-EGKEREVAIEEFAEQMKFLENELNGKDFFG 138
            FID+K++    K+ F  + KERE  +EE  E ++FLENEL  K FFG
Sbjct:  103 FIDDKIVGAVSKSVFTVDEKEREKNVEETYEALQFLENELKDKKFFG 149          
BLAST of CK739807 vs. ExPASy Swiss-Prot
Match: GSTXA_ARATH (Glutathione S-transferase 103-1A OS=Arabidopsis thaliana GN=103-1A PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 2.649e-14
Identity = 28/73 (38.36%), Postives = 47/73 (64.38%), Query Frame = 2
Query:  140 IGFLDIVA-NLIAFWFPVRQDALGIEAFTQEKFPVLFKWIANITKIDLVNECRPPREKHLAFVKAHIEGLKSA 355
            +GFLD VA +LI F      + +G+E  T+EKFP   +W+ N+ K+++V +C PPRE+H+  +    E ++S+
Sbjct:  152 VGFLDFVAGSLIPFCLERGWEGIGLEVITEEKFPEFKRWVRNLEKVEIVKDCVPPREEHVEHMNYMAERVRSS 224          

HSP 2 Score: 35.4242 bits (80), Expect = 2.649e-14
Identity = 18/46 (39.13%), Postives = 29/46 (63.04%), Query Frame = 1
Query:    4 IDEKVLATGWKANF-GEGKEREVAIEEFAEQMKFLENELNGKDFFG 138
            +DE+++  G+ +    + K REV  E+  E + +LE EL GKD+FG
Sbjct:  103 VDEQIMNVGFISMARADEKGREVLAEQVRELIMYLEKELVGKDYFG 148          
BLAST of CK739807 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 2.152e-13
Identity = 31/76 (40.79%), Postives = 41/76 (53.95%), Query Frame = 2
Query:  143 GFLDIVANLIAFWFPVRQDALGIEAFTQEKFPVLFKWIANITKIDLVNECRPPREKHLAFVKAHIEGL---KSAPK 361
            GF DI ANL+AFW  V ++A G+   T EKFP   KW         + E  PPR++ LAF ++  +      SAPK
Sbjct:  148 GFADIAANLVAFWLGVFEEASGVVLVTSEKFPNFCKWRGEYINCSQIKESLPPRDELLAFYRSRCQAAAASASAPK 223          

HSP 2 Score: 35.039 bits (79), Expect = 2.152e-13
Identity = 20/45 (44.44%), Postives = 27/45 (60.00%), Query Frame = 1
Query:    1 FIDEKVLATGWKANFGEGKEREVAIEEFAEQMKFLENELNGKDFF 135
            F+D+KV A   K    +G+E+E   EE  E +K L+NEL  K FF
Sbjct:   99 FLDDKVPAVV-KTFLRKGEEQEKDKEEVCEMLKVLDNELKDKKFF 142          
BLAST of CK739807 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 3.631e-13
Identity = 31/76 (40.79%), Postives = 40/76 (52.63%), Query Frame = 2
Query:  143 GFLDIVANLIAFWFPVRQDALGIEAFTQEKFPVLFKWIANITKIDLVNECRPPREKHLAFVKAHIEGL---KSAPK 361
            GF DI ANL+ FW  V ++  G      EKFP   KW         VNE  PPR++ LAF +A  + +   +SAPK
Sbjct:  148 GFADIAANLVGFWLGVFEEGYGDVLVKSEKFPNFSKWRDEYINCSQVNESLPPRDELLAFFRARFQAVVASRSAPK 223          

HSP 2 Score: 36.1946 bits (82), Expect = 3.631e-13
Identity = 20/45 (44.44%), Postives = 27/45 (60.00%), Query Frame = 1
Query:    1 FIDEKVLATGWKANFGEGKEREVAIEEFAEQMKFLENELNGKDFF 135
            F+D+KV A      F +G+E+E   EE  E +K L+NEL  K FF
Sbjct:   99 FLDDKVAAVV-NTFFRKGEEQEKGKEEVYEMLKVLDNELKDKKFF 142          
BLAST of CK739807 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 2.377e-11
Identity = 29/76 (38.16%), Postives = 39/76 (51.32%), Query Frame = 2
Query:  143 GFLDIVANLIAFWFPVRQDALGIEAFTQEKFPVLFKWIANITKIDLVNECRPPREKHLAFVKAHIEGLK---SAPK 361
            GF DI ANL+ FW  V ++  G+   T EKFP   +W         V E  P R++ LAF +A  + +    SAPK
Sbjct:  148 GFADIAANLVGFWLGVFEEGYGVVLVTSEKFPNFSRWRDEYINCSQVKESLPSRDELLAFFRARFQAVVASISAPK 223          

HSP 2 Score: 33.4982 bits (75), Expect = 2.377e-11
Identity = 19/45 (42.22%), Postives = 26/45 (57.78%), Query Frame = 1
Query:    1 FIDEKVLATGWKANFGEGKEREVAIEEFAEQMKFLENELNGKDFF 135
            F+ +KV A      F +G+E+E   EE  E +K L+NEL  K FF
Sbjct:   99 FLGDKVAAVV-NTFFRKGEEQEKGKEEVYEMLKVLDNELKDKKFF 142          
The following BLAST results are available for this feature:
BLAST of CK739807 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
GSTX6_SOYBN6.007e-1842.25Probable glutathione S-transferase OS=Glycine max ... [more]
GSTXA_ARATH2.649e-1438.36Glutathione S-transferase 103-1A OS=Arabidopsis th... [more]
GSTX1_TOBAC2.152e-1340.79Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX2_TOBAC3.631e-1340.79Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX3_TOBAC2.377e-1138.16Probable glutathione S-transferase OS=Nicotiana ta... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_6197 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE59H04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739807 ID=CK739807; Name=CK739807; organism=Citrus sinensis; type=EST; length=612bp
TTCATTGATGAGAAGGTCTTGGCCACAGGATGGAAGGCTAATTTTGGTGA
AGGGAAGGAGAGAGAGGTTGCGATTGAAGAATTTGCTGAGCAGATGAAAT
TCTTGGAGAATGAACTCAATGGAAAAGACTTCTTTGGCTATTGGGTTTCT
TGATATTGTTGCAAATCTTATTGCATTTTGGTTCCCAGTGAGGCAAGACG
CTCTTGGAATAGAAGCATTCACTCAAGAAAAATTTCCAGTTTTATTCAAG
TGGATTGCTAACATCACGAAGATTGATCTGGTGAACGAATGCCGACCTCC
AAGAGAGAAGCATCTTGCCTTTGTTAAAGCTCACATTGAAGGCCTCAAAT
CTGCTCCTAAGTAGGGAAACTTCAGTGTCTTGATGGGATCAGACCCCGGA
TATGCTCTGTCTTGTGACCATGTGTTTGCATCACGCGTTTTAGCTCTATG
TCGGCATTTGGTGAGACTGAGTCTTCAATCTTATGTAGTAAAATCAAAAT
AAATTTCCAAGCAACTGGAGCATTAAAATAAGCTCCCAAAGCTACACTCT
CATAAATGCTTCCTCTCCGTGGTCTTGTGGATTTAATTTAAAGCAAGAAT
ACACTTTACTAA
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