CK739835
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK739835 vs. ExPASy Swiss-Prot
Match: UBC16_ARATH (Probable ubiquitin carrier protein E2 16 OS=Arabidopsis thaliana GN=UBC16 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 4.662e-28 Identity = 54/64 (84.38%), Postives = 60/64 (93.75%), Query Frame = 1 Query: 34 MTSSSAPSRKALSKIASNRLQKELVEWQVNPPAGFKHKVTDNLQRWIIEVNGAPGTLYANETFE 225 M+SS APSRK LSKIA+NRLQKELVEWQ+NPP GFKHKVTDNLQRWIIEV GAPGTLYAN+T++ Sbjct: 1 MSSSGAPSRKTLSKIATNRLQKELVEWQMNPPTGFKHKVTDNLQRWIIEVIGAPGTLYANDTYQ 64 HSP 2 Score: 26.9498 bits (58), Expect = 4.662e-28 Identity = 9/11 (81.82%), Postives = 11/11 (100.00%), Query Frame = 3 Query: 231 KLDFPEHYPME 263 ++DFPEHYPME Sbjct: 66 QVDFPEHYPME 76
BLAST of CK739835 vs. ExPASy Swiss-Prot
Match: UBC18_ARATH (Probable ubiquitin carrier protein E2 18 OS=Arabidopsis thaliana GN=UBC18 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.270e-27 Identity = 54/63 (85.71%), Postives = 59/63 (93.65%), Query Frame = 1 Query: 34 MTSSSAPSRKALSKIASNRLQKELVEWQVNPPAGFKHKVTDNLQRWIIEVNGAPGTLYANETF 222 MTSSS+PSRKALSKIA NRLQKEL EWQVNPP GFKH+VTDNLQ+W+IEV GAPGTLYANET+ Sbjct: 1 MTSSSSPSRKALSKIACNRLQKELSEWQVNPPTGFKHRVTDNLQKWVIEVTGAPGTLYANETY 63 HSP 2 Score: 24.2534 bits (51), Expect = 2.270e-27 Identity = 7/11 (63.64%), Postives = 11/11 (100.00%), Query Frame = 3 Query: 231 KLDFPEHYPME 263 +++FP+HYPME Sbjct: 66 QVEFPQHYPME 76
BLAST of CK739835 vs. ExPASy Swiss-Prot
Match: UBC15_ARATH (Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana GN=UBC15 PE=2 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 3.847e-27 Identity = 53/64 (82.81%), Postives = 59/64 (92.19%), Query Frame = 1 Query: 34 MTSSSAPSRKALSKIASNRLQKELVEWQVNPPAGFKHKVTDNLQRWIIEVNGAPGTLYANETFE 225 MTSSSAPSRKALSKIA NRLQKEL EWQ+NPP GF+HKVTDNLQ+W I+V GAPGTLYANET++ Sbjct: 1 MTSSSAPSRKALSKIACNRLQKELSEWQLNPPTGFRHKVTDNLQKWTIDVTGAPGTLYANETYQ 64 HSP 2 Score: 25.409 bits (54), Expect = 3.847e-27 Identity = 8/11 (72.73%), Postives = 11/11 (100.00%), Query Frame = 3 Query: 231 KLDFPEHYPME 263 +++FPEHYPME Sbjct: 66 QVEFPEHYPME 76
BLAST of CK739835 vs. ExPASy Swiss-Prot
Match: UBC17_ARATH (Probable ubiquitin carrier protein E2 17 OS=Arabidopsis thaliana GN=UBC17 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.427e-25 Identity = 48/64 (75.00%), Postives = 58/64 (90.62%), Query Frame = 1 Query: 34 MTSSSAPSRKALSKIASNRLQKELVEWQVNPPAGFKHKVTDNLQRWIIEVNGAPGTLYANETFE 225 MTSSS +RK L+KIA+NRLQKE +EWQ NPP+GFKH+V+DNLQRWIIEV+G PGTLYANET++ Sbjct: 1 MTSSSESTRKGLTKIATNRLQKEFMEWQTNPPSGFKHRVSDNLQRWIIEVHGVPGTLYANETYQ 64 HSP 2 Score: 25.409 bits (54), Expect = 4.427e-25 Identity = 8/11 (72.73%), Postives = 11/11 (100.00%), Query Frame = 3 Query: 231 KLDFPEHYPME 263 +++FPEHYPME Sbjct: 66 QVEFPEHYPME 76 The following BLAST results are available for this feature:
BLAST of CK739835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK739835 ID=CK739835; Name=CK739835; organism=Citrus sinensis; type=EST; length=264bpback to top |