CK739916

Overview
NameCK739916
Unique NameCK739916
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length575
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1840 contig Csv1_Contig1840:1010..1584. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK739916 vs. ExPASy Swiss-Prot
Match: SAHH2_ARATH (Adenosylhomocysteinase 2 OS=Arabidopsis thaliana GN=SAHH2 PE=1 SV=1)

HSP 1 Score: 336.265 bits (861), Expect = 6.554e-92
Identity = 161/191 (84.29%), Postives = 173/191 (90.58%), Query Frame = 3 
Query:    3 PICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKNLDEXXXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 575
            PICALQALMEGLQVLTLEDVVS+ADIF TTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFP+TNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EKS+GKYEKKVYVLPK+LDE              T+LTK+Q+DY+S+  +GPYKP+HYRY
Sbjct:  295 PICALQALMEGLQVLTLEDVVSEADIFCTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGARLTKLTKDQSDYVSIPVEGPYKPVHYRY 485
[Close]
BLAST of CK739916 vs. ExPASy Swiss-Prot
Match: SAHH_TOBAC (Adenosylhomocysteinase OS=Nicotiana tabacum GN=SAHH PE=2 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 8.559e-92
Identity = 163/191 (85.34%), Postives = 171/191 (89.53%), Query Frame = 3 
Query:    3 PICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKNLDEXXXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 575
            PICALQA MEGLQVLTLEDVVSD DIFVTTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFP+TNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EKS+GKYEKKVYVLPK+LDE              T+L+K+QADYISV  +GPYKP HYRY
Sbjct:  295 PICALQATMEGLQVLTLEDVVSDVDIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYISVPVEGPYKPAHYRY 485
[Close]
BLAST of CK739916 vs. ExPASy Swiss-Prot
Match: SAHH_NICSY (Adenosylhomocysteinase OS=Nicotiana sylvestris GN=SAHH PE=2 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 8.559e-92
Identity = 163/191 (85.34%), Postives = 171/191 (89.53%), Query Frame = 3 
Query:    3 PICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKNLDEXXXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 575
            PICALQA MEGLQVLTLEDVVSD DIFVTTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFP+TNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EKS+GKYEKKVYVLPK+LDE              T+L+K+QADYISV  +GPYKP HYRY
Sbjct:  295 PICALQATMEGLQVLTLEDVVSDVDIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYISVPVEGPYKPAHYRY 485
[Close]
BLAST of CK739916 vs. ExPASy Swiss-Prot
Match: SAHH_CATRO (Adenosylhomocysteinase OS=Catharanthus roseus GN=SAHH PE=2 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 8.559e-92
Identity = 163/191 (85.34%), Postives = 171/191 (89.53%), Query Frame = 3 
Query:    3 PICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKNLDEXXXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 575
            PICALQA MEGLQVLTLEDVVS+ADIFVTTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFP+TNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW E+ TGKYEKKVYVLPK+LDE              T+LTK+QADYISV  +GPYKP HYRY
Sbjct:  295 PICALQATMEGLQVLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNERKTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLTKDQADYISVPIEGPYKPAHYRY 485
[Close]
BLAST of CK739916 vs. ExPASy Swiss-Prot
Match: SAHH_LUPLU (Adenosylhomocysteinase OS=Lupinus luteus GN=SAHH PE=2 SV=1)

HSP 1 Score: 333.954 bits (855), Expect = 3.252e-91
Identity = 161/191 (84.29%), Postives = 172/191 (90.05%), Query Frame = 3 
Query:    3 PICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKNLDEXXXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 575
            PICALQA MEGLQVLTLEDVVS+ADIFVTTTGNKDIIM+DHMKKMKNNAIVCNIGHFDNEIDMLGLET+PGVKRITIKPQTDRWVFPETN+GII+LAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EKS+GKYEKKVYVLPK+LDE              T+L+K+QADYISV  +GPYKP HYRY
Sbjct:  295 PICALQATMEGLQVLTLEDVVSEADIFVTTTGNKDIIMLDHMKKMKNNAIVCNIGHFDNEIDMLGLETHPGVKRITIKPQTDRWVFPETNTGIIILAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLEKLGAKLTKLSKDQADYISVPVEGPYKPFHYRY 485
[Close]
BLAST of CK739916 vs. ExPASy Swiss-Prot
Match: SAHH1_ARATH (Adenosylhomocysteinase 1 OS=Arabidopsis thaliana GN=SAHH1 PE=1 SV=1)

HSP 1 Score: 331.257 bits (848), Expect = 2.108e-90
Identity = 159/191 (83.25%), Postives = 172/191 (90.05%), Query Frame = 3 
Query:    3 PICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKNLDEXXXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 575
            PICALQALMEGLQVLTLEDVVS+ADIFVTTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPET +GIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EK++GKYEKKVYVLPK+LDE              T+L+K+Q+DY+S+  +GPYKP HYRY
Sbjct:  295 PICALQALMEGLQVLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETKAGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKASGKYEKKVYVLPKHLDEKVALLHLGKLGARLTKLSKDQSDYVSIPIEGPYKPPHYRY 485
[Close]
BLAST of CK739916 vs. ExPASy Swiss-Prot
Match: SAHH_MEDSA (Adenosylhomocysteinase OS=Medicago sativa GN=SAHH PE=2 SV=1)

HSP 1 Score: 328.946 bits (842), Expect = 1.046e-89
Identity = 160/191 (83.77%), Postives = 170/191 (89.01%), Query Frame = 3 
Query:    3 PICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKNLDEXXXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 575
            PICALQALMEGLQVLTLEDV+S+ADIFVTTTGNKDIIMV  MKKMKNNAIVCNIGHFDNEIDM GLETYPGVKRITIKPQTDRWVFPET SGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ+ELWKEK++GKYEKKVYVLPK+LDE              T+L+K+QADYISV  +GPYKP HYRY
Sbjct:  295 PICALQALMEGLQVLTLEDVISEADIFVTTTGNKDIIMVSDMKKMKNNAIVCNIGHFDNEIDMHGLETYPGVKRITIKPQTDRWVFPETKSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQIELWKEKTSGKYEKKVYVLPKHLDEKVAALHLGQLGAKLTKLSKDQADYISVPVEGPYKPAHYRY 485
[Close]
BLAST of CK739916 vs. ExPASy Swiss-Prot
Match: SAHH_SOLLC (Adenosylhomocysteinase OS=Solanum lycopersicum GN=SAHH PE=2 SV=1)

HSP 1 Score: 325.479 bits (833), Expect = 1.157e-88
Identity = 158/191 (82.72%), Postives = 168/191 (87.96%), Query Frame = 3 
Query:    3 PICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKNLDEXXXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 575
            PICALQA MEGLQVL LEDVVS+ DIFVTTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEIDM GLET+PGVKRITIKPQTDRWVFP+TNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW E+S+GKYEKKVYVLPK+LDE              T+LTK+QADYI V  +GPYKP HYRY
Sbjct:  295 PICALQATMEGLQVLFLEDVVSEVDIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMHGLETFPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNERSSGKYEKKVYVLPKHLDEKVAALHLGKFGAKLTKLTKDQADYIYVPVEGPYKPAHYRY 485
[Close]
BLAST of CK739916 vs. ExPASy Swiss-Prot
Match: SAHH_MESCR (Adenosylhomocysteinase OS=Mesembryanthemum crystallinum GN=SAHH PE=2 SV=1)

HSP 1 Score: 325.479 bits (833), Expect = 1.157e-88
Identity = 157/191 (82.20%), Postives = 170/191 (89.01%), Query Frame = 3 
Query:    3 PICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKNLDEXXXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 575
            PICALQALMEG Q+LTLEDVVS+ADIFVTTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEIDMLGLE YPGVKRITIKPQTDR+VFPETN+GIIVLAEGRLM LGCATGHPSFVMSCSFTNQVIAQLELW E+++GKYEKKVYVLPK+LDE              T+L+K+QADYISV  +GPYKP HYRY
Sbjct:  295 PICALQALMEGFQILTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLENYPGVKRITIKPQTDRFVFPETNTGIIVLAEGRLMKLGCATGHPSFVMSCSFTNQVIAQLELWNERASGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYISVPVEGPYKPAHYRY 485
[Close]
BLAST of CK739916 vs. ExPASy Swiss-Prot
Match: SAHH_PETCR (Adenosylhomocysteinase OS=Petroselinum crispum GN=SAHH PE=2 SV=2)

HSP 1 Score: 321.627 bits (823), Expect = 1.670e-87
Identity = 156/191 (81.68%), Postives = 166/191 (86.91%), Query Frame = 3 
Query:    3 PICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKNLDEXXXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 575
            PICALQA MEGLQVL LEDVVS+ DIFVTTTGNKDIIMV  M+KMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFP+T  GII+LAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EKS+GKYEKKVYVLPK+LDE              T+L+K+QADYISV  +GPYKP HYRY
Sbjct:  295 PICALQATMEGLQVLPLEDVVSEVDIFVTTTGNKDIIMVSDMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTGRGIIILAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYISVPVEGPYKPAHYRY 485
The following BLAST results are available for this feature:
BLAST of CK739916 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
SAHH2_ARATH6.554e-9284.29Adenosylhomocysteinase 2 OS=Arabidopsis thaliana G... [more]
SAHH_TOBAC8.559e-9285.34Adenosylhomocysteinase OS=Nicotiana tabacum GN=SAH... [more]
SAHH_NICSY8.559e-9285.34Adenosylhomocysteinase OS=Nicotiana sylvestris GN=... [more]
SAHH_CATRO8.559e-9285.34Adenosylhomocysteinase OS=Catharanthus roseus GN=S... [more]
SAHH_LUPLU3.252e-9184.29Adenosylhomocysteinase OS=Lupinus luteus GN=SAHH P... [more]
SAHH1_ARATH2.108e-9083.25Adenosylhomocysteinase 1 OS=Arabidopsis thaliana G... [more]
SAHH_MEDSA1.046e-8983.77Adenosylhomocysteinase OS=Medicago sativa GN=SAHH ... [more]
SAHH_SOLLC1.157e-8882.72Adenosylhomocysteinase OS=Solanum lycopersicum GN=... [more]
SAHH_MESCR1.157e-8882.20Adenosylhomocysteinase OS=Mesembryanthemum crystal... [more]
SAHH_PETCR1.670e-8781.68Adenosylhomocysteinase OS=Petroselinum crispum GN=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_6308 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE61H02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739916 ID=CK739916; Name=CK739916; organism=Citrus sinensis; type=EST; length=575bp
ATCCAATTTGCGCTCTCCAGGCTCTTATGGAGGGTCTTCAAGTCCTAACC
CTTGAGGACGTCGTCTCCGATGCTGACATCTTTGTTACCACCACCGGTAA
CAAGGACATCATCATGGTTGACCACATGAAGAAGATGAAGAACAATGCAA
TTGTTTGCAACATTGGTCACTTTGATAATGAAATTGATATGCTCGGTCTT
GAGACCTACCCGGGTGTTAAGCGCATTACCATCAAGCCCCAAACTGATAG
GTGGGTCTTCCCGGAGACCAACTCAGGCATCATCGTGTTGGCTGAGGGAC
GTCTCATGAACTTGGGATGTGCCACTGGACACCCCAGCTTTGTGATGTCC
TGCTCCTTCACCAACCAGGTGATTGCCCAGCTTGAGCTCTGGAAGGAGAA
GAGCACCGGCAAGTACGAGAAGAAGGTGTACGTTCTGCCCAAGAACCTCG
ATGAAAAGGGTGCTGCTCTTCACCTTGGCAAACTTGGAGCTAAGCTCACC
AGGCTCACCAAGGAGCAGGCTGACTACATCAGTGTGTCCGCCGATGGTCC
TTACAAGCCTCTTCACTACAGGTAC
back to top