CK739947

Overview
NameCK739947
Unique NameCK739947
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length442
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10993 contig Csv1_Contig10993:769..1177. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK739947 vs. ExPASy Swiss-Prot
Match: ALFC2_ARATH (Probable fructose-bisphosphate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 9.313e-20
Identity = 32/33 (96.97%), Postives = 33/33 (100.00%), Query Frame = -3
Query:  270 RAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 368
            RAKANSLAQLGKYTGEGESEEAK+GMFVKGYTY
Sbjct:  366 RAKANSLAQLGKYTGEGESEEAKEGMFVKGYTY 398          

HSP 2 Score: 48.521 bits (114), Expect = 9.313e-20
Identity = 21/23 (91.30%), Postives = 21/23 (91.30%), Query Frame = -2
Query:  373 QNTCLKTWGGRPENVKAAQDTLL 441
            QNTCLKTWGGRPENV AAQ TLL
Sbjct:  342 QNTCLKTWGGRPENVNAAQTTLL 364          
BLAST of CK739947 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 3.464e-19
Identity = 32/33 (96.97%), Postives = 33/33 (100.00%), Query Frame = -3
Query:  270 RAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 368
            RAKANSLAQLGKYTGEGESEEAK+GMFVKGYTY
Sbjct:  367 RAKANSLAQLGKYTGEGESEEAKEGMFVKGYTY 399          

HSP 2 Score: 46.595 bits (109), Expect = 3.464e-19
Identity = 20/23 (86.96%), Postives = 21/23 (91.30%), Query Frame = -2
Query:  373 QNTCLKTWGGRPENVKAAQDTLL 441
            QNTCLKTWGG+ ENVKAAQD LL
Sbjct:  343 QNTCLKTWGGKEENVKAAQDILL 365          
BLAST of CK739947 vs. ExPASy Swiss-Prot
Match: ALFC_ORYSJ (Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2)

HSP 1 Score: 56.9954 bits (136), Expect = 8.593e-17
Identity = 26/33 (78.79%), Postives = 29/33 (87.88%), Query Frame = -3
Query:  270 RAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 368
            RAKANSLAQLGKYT +GE+ EAK+GMFVK Y Y
Sbjct:  356 RAKANSLAQLGKYTSDGEAAEAKEGMFVKNYVY 388          

HSP 2 Score: 49.6766 bits (117), Expect = 8.593e-17
Identity = 21/23 (91.30%), Postives = 22/23 (95.65%), Query Frame = -2
Query:  373 QNTCLKTWGGRPENVKAAQDTLL 441
            QNTCLKTWGG+PENVKAAQD LL
Sbjct:  332 QNTCLKTWGGQPENVKAAQDALL 354          
BLAST of CK739947 vs. ExPASy Swiss-Prot
Match: ALFC1_PEA (Fructose-bisphosphate aldolase 1, chloroplastic (Fragment) OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.540e-15
Identity = 27/33 (81.82%), Postives = 31/33 (93.94%), Query Frame = -3
Query:  270 RAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 368
            RAK+NSLAQLGKY G+GESEEAKK +FVKGY+Y
Sbjct:  324 RAKSNSLAQLGKYYGDGESEEAKKELFVKGYSY 356          

HSP 2 Score: 43.5134 bits (101), Expect = 1.540e-15
Identity = 19/23 (82.61%), Postives = 20/23 (86.96%), Query Frame = -2
Query:  373 QNTCLKTWGGRPENVKAAQDTLL 441
            QNT LKTWGG PENVKAAQ+ LL
Sbjct:  300 QNTALKTWGGLPENVKAAQEALL 322          
BLAST of CK739947 vs. ExPASy Swiss-Prot
Match: ALFC3_ARATH (Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 1.317e-13
Identity = 29/33 (87.88%), Postives = 32/33 (96.97%), Query Frame = -3
Query:  270 RAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 368
            RAKANSLAQLGKY+ EGE+E+AKKGMFVKGYTY
Sbjct:  359 RAKANSLAQLGKYSAEGENEDAKKGMFVKGYTY 391          

HSP 2 Score: 32.3426 bits (72), Expect = 1.317e-13
Identity = 12/23 (52.17%), Postives = 18/23 (78.26%), Query Frame = -2
Query:  373 QNTCLKTWGGRPENVKAAQDTLL 441
            QN+ L+TW G+PE ++A+Q  LL
Sbjct:  335 QNSVLRTWQGKPEKIEASQKALL 357          
BLAST of CK739947 vs. ExPASy Swiss-Prot
Match: ALFC2_PEA (Fructose-bisphosphate aldolase 2, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 48.1358 bits (113), Expect = 2.344e-12
Identity = 24/33 (72.73%), Postives = 28/33 (84.85%), Query Frame = -3
Query:  270 RAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 368
            RAK+NSLAQLGKY G+GESEEAKK    +GY+Y
Sbjct:  318 RAKSNSLAQLGKYIGDGESEEAKKDC-CQGYSY 349          

HSP 2 Score: 43.5134 bits (101), Expect = 2.344e-12
Identity = 19/23 (82.61%), Postives = 20/23 (86.96%), Query Frame = -2
Query:  373 QNTCLKTWGGRPENVKAAQDTLL 441
            QNT LKTWGG PENVKAAQ+ LL
Sbjct:  294 QNTALKTWGGLPENVKAAQEALL 316          
The following BLAST results are available for this feature:
BLAST of CK739947 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
ALFC2_ARATH9.313e-2096.97Probable fructose-bisphosphate aldolase 2, chlorop... [more]
ALFC1_ARATH3.464e-1996.97Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALFC_ORYSJ8.593e-1778.79Fructose-bisphosphate aldolase, chloroplastic OS=O... [more]
ALFC1_PEA1.540e-1581.82Fructose-bisphosphate aldolase 1, chloroplastic (F... [more]
ALFC3_ARATH1.317e-1387.88Probable fructose-bisphosphate aldolase 3, chlorop... [more]
ALFC2_PEA2.344e-1272.73Fructose-bisphosphate aldolase 2, chloroplastic OS... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_6769 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE68C10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739947 ID=CK739947; Name=CK739947; organism=Citrus sinensis; type=EST; length=442bp
ATAAAGAAAGAGGGTTTAATTTATAGTTGAGGACTGTAAACTAAAGCAGT
ATAAGATACGATGCACATAAAAGTACAGAGAACTTAATCTCATCATAAAT
ACACACTAACTCATCTCATTGGCAAGAAGTTTATTAAGTTGCTAAAAGTA
CATGTAATCATGAACAAAAATAGTCTCCAAAGCACGGCTATAAAGCATTA
ACACATTTGAGATGACTACTCATTTCAAATTTCTTCACCATTCTTATGAT
CTTCGTGCTAACAAATTTAGTAGGTGTATCCCTTGACGAACATTCCTTTC
TTGGCCTCCTCTGATTCTCCCTCGCCAGTGTACTTGCCGAGCTGAGCAAG
TGAGTTGGCCTTGGCACGGGGTGAGCAGAGTATCCTGAGCTGCCTTGACA
TTCTCTGGCCTGCCACCCCATGTCTTCAGGCAGGTGTTTTGG
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