CK739988
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK739988 vs. ExPASy Swiss-Prot
Match: UBC13_ARATH (Ubiquitin-conjugating enzyme E2 13 OS=Arabidopsis thaliana GN=UBC13 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.890e-41 Identity = 61/80 (76.25%), Postives = 66/80 (82.50%), Query Frame = 1
Query: 76 GRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRSQEM 315
GRVCISILHPPGDDP+GYELASERW PVHTVE PNDESPANVEAAKEWR++RD+FKKKV RCVR+SQEM
Sbjct: 86 GRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWREKRDEFKKKVSRCVRKSQEM 165 HSP 2 Score: 56.6102 bits (135), Expect = 2.890e-41 Identity = 21/24 (87.50%), Postives = 24/24 (100.00%), Query Frame = 3
Query: 6 NYPNSPPTVKFTTEIWHPNVYPDG 77
NYPNSPPTV+FT++IWHPNVYPDG
Sbjct: 63 NYPNSPPTVRFTSDIWHPNVYPDG 86
BLAST of CK739988 vs. ExPASy Swiss-Prot
Match: UBC7_ARATH (Ubiquitin-conjugating enzyme E2 7 OS=Arabidopsis thaliana GN=UBC7 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.843e-40 Identity = 62/80 (77.50%), Postives = 66/80 (82.50%), Query Frame = 1
Query: 76 GRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRSQEM 315
GRVCISILHPPGDDP+GYELASERW PVHTVE PNDESPANVEAAKEWRD+RD+FKKKV RCVR+SQEM
Sbjct: 86 GRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWRDKRDEFKKKVSRCVRKSQEM 165 HSP 2 Score: 52.373 bits (124), Expect = 1.843e-40 Identity = 19/24 (79.17%), Postives = 23/24 (95.83%), Query Frame = 3
Query: 6 NYPNSPPTVKFTTEIWHPNVYPDG 77
NYPNSPPTV+FT+++WHPNVY DG
Sbjct: 63 NYPNSPPTVRFTSDMWHPNVYSDG 86
BLAST of CK739988 vs. ExPASy Swiss-Prot
Match: UBC7_WHEAT (Ubiquitin-conjugating enzyme E2 7 OS=Triticum aestivum GN=UBC7 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 3.385e-39 Identity = 58/81 (71.60%), Postives = 65/81 (80.25%), Query Frame = 1
Query: 76 GRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRSQEML 318
GRVCISI HPPGDDPNGYELASERW PVHTVE PNDESPAN+EAAK+WR+++D+FKKKV R VR+SQEML
Sbjct: 89 GRVCISI-HPPGDDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPANIEAAKDWREKQDEFKKKVRRAVRKSQEML 168 HSP 2 Score: 59.6918 bits (143), Expect = 3.385e-39 Identity = 24/32 (75.00%), Postives = 29/32 (90.62%), Query Frame = 3
Query: 6 NYPNSPPTVKFTTEIWHPNVYPDG-PCLHINP 98
NYPNSPPTV+FT+E+WHPNVYPDG C+ I+P
Sbjct: 66 NYPNSPPTVRFTSEMWHPNVYPDGRVCISIHP 97
BLAST of CK739988 vs. ExPASy Swiss-Prot
Match: UBC14_ARATH (Ubiquitin-conjugating enzyme E2 14 OS=Arabidopsis thaliana GN=UBC14 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.656e-38 Identity = 61/81 (75.31%), Postives = 65/81 (80.25%), Query Frame = 1
Query: 76 GRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRSQEML 318
G+VCISILHPPGDDP+GYELASERW PVHTVE PNDESPANVEAAKEWRD R +F+KKV RCVRRSQEML
Sbjct: 87 GKVCISILHPPGDDPHGYELASERWTPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDNRAEFRKKVSRCVRRSQEML 167 HSP 2 Score: 49.2914 bits (116), Expect = 1.656e-38 Identity = 21/30 (70.00%), Postives = 24/30 (80.00%), Query Frame = 3
Query: 6 NYPNSPPTVKFTTEIWHPNVYPDGP-CLHI 92
NYP SPPTV FT+E+WHPNVY DG C+ I
Sbjct: 64 NYPVSPPTVTFTSEMWHPNVYSDGKVCISI 93
BLAST of CK739988 vs. ExPASy Swiss-Prot
Match: UBC15_SCHPO (Ubiquitin-conjugating enzyme E2 15 OS=Schizosaccharomyces pombe GN=ubc15 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 9.423e-29 Identity = 48/81 (59.26%), Postives = 57/81 (70.37%), Query Frame = 1
Query: 76 GRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRSQEML 318
G VCISILHPPGDD GYE A ERW+PVH+ E PNDESPAN++AAKE+R+ +FKK+V R VRRS EM+
Sbjct: 87 GEVCISILHPPGDDKYGYEDAGERWLPVHSPETILISVISMLSSPNDESPANIDAAKEFRENPQEFKKRVRRLVRRSIEMI 167 HSP 2 Score: 46.2098 bits (108), Expect = 9.423e-29 Identity = 19/30 (63.33%), Postives = 24/30 (80.00%), Query Frame = 3
Query: 6 NYPNSPPTVKFTTEIWHPNVYPDGP-CLHI 92
+YP PP +KFTTEIWHPNV+P+G C+ I
Sbjct: 64 DYPLMPPKMKFTTEIWHPNVHPNGEVCISI 93
BLAST of CK739988 vs. ExPASy Swiss-Prot
Match: UB2G1_RAT (Ubiquitin-conjugating enzyme E2 G1 OS=Rattus norvegicus GN=Ube2g1 PE=2 SV=3) HSP 1 Score: 101.679 bits (252), Expect = 1.087e-26 Identity = 48/80 (60.00%), Postives = 56/80 (70.00%), Query Frame = 1
Query: 76 GRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWR-DRRDDFKKKVGRCVRRSQE 312
G VCISILH PG+D GYE ERW+P+HTVE PN +SPANV+AAKEWR DR +FK+KV RCVR+SQE
Sbjct: 87 GDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKSQE 166 HSP 2 Score: 38.891 bits (89), Expect = 1.087e-26 Identity = 17/30 (56.67%), Postives = 21/30 (70.00%), Query Frame = 3
Query: 6 NYPNSPPTVKFTTEIWHPNVYPDGP-CLHI 92
+YP PP +KF TEIWHPNV +G C+ I
Sbjct: 64 DYPLRPPKMKFITEIWHPNVDKNGDVCISI 93
BLAST of CK739988 vs. ExPASy Swiss-Prot
Match: UB2G1_MOUSE (Ubiquitin-conjugating enzyme E2 G1 OS=Mus musculus GN=Ube2g1 PE=2 SV=3) HSP 1 Score: 101.679 bits (252), Expect = 1.087e-26 Identity = 48/80 (60.00%), Postives = 56/80 (70.00%), Query Frame = 1
Query: 76 GRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWR-DRRDDFKKKVGRCVRRSQE 312
G VCISILH PG+D GYE ERW+P+HTVE PN +SPANV+AAKEWR DR +FK+KV RCVR+SQE
Sbjct: 87 GDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKSQE 166 HSP 2 Score: 38.891 bits (89), Expect = 1.087e-26 Identity = 17/30 (56.67%), Postives = 21/30 (70.00%), Query Frame = 3
Query: 6 NYPNSPPTVKFTTEIWHPNVYPDGP-CLHI 92
+YP PP +KF TEIWHPNV +G C+ I
Sbjct: 64 DYPLRPPKMKFITEIWHPNVDKNGDVCISI 93
BLAST of CK739988 vs. ExPASy Swiss-Prot
Match: UB2G1_HUMAN (Ubiquitin-conjugating enzyme E2 G1 OS=Homo sapiens GN=UBE2G1 PE=1 SV=3) HSP 1 Score: 101.679 bits (252), Expect = 1.087e-26 Identity = 48/80 (60.00%), Postives = 56/80 (70.00%), Query Frame = 1
Query: 76 GRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWR-DRRDDFKKKVGRCVRRSQE 312
G VCISILH PG+D GYE ERW+P+HTVE PN +SPANV+AAKEWR DR +FK+KV RCVR+SQE
Sbjct: 87 GDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKSQE 166 HSP 2 Score: 38.891 bits (89), Expect = 1.087e-26 Identity = 17/30 (56.67%), Postives = 21/30 (70.00%), Query Frame = 3
Query: 6 NYPNSPPTVKFTTEIWHPNVYPDGP-CLHI 92
+YP PP +KF TEIWHPNV +G C+ I
Sbjct: 64 DYPLRPPKMKFITEIWHPNVDKNGDVCISI 93
BLAST of CK739988 vs. ExPASy Swiss-Prot
Match: UB2G1_MACFA (Ubiquitin-conjugating enzyme E2 G1 OS=Macaca fascicularis GN=UBE2G1 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 6.885e-26 Identity = 47/80 (58.75%), Postives = 55/80 (68.75%), Query Frame = 1
Query: 76 GRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWR-DRRDDFKKKVGRCVRRSQE 312
G VCISILH PG+D GYE RW+P+HTVE PN +SPANV+AAKEWR DR +FK+KV RCVR+SQE
Sbjct: 87 GDVCISILHEPGEDKYGYEKPEGRWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKSQE 166 HSP 2 Score: 38.891 bits (89), Expect = 6.885e-26 Identity = 17/30 (56.67%), Postives = 21/30 (70.00%), Query Frame = 3
Query: 6 NYPNSPPTVKFTTEIWHPNVYPDGP-CLHI 92
+YP PP +KF TEIWHPNV +G C+ I
Sbjct: 64 DYPLRPPKMKFITEIWHPNVDKNGDVCISI 93
BLAST of CK739988 vs. ExPASy Swiss-Prot
Match: UBC7_CAEEL (Probable ubiquitin-conjugating enzyme E2 7 OS=Caenorhabditis elegans GN=ubc-7 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.353e-25 Identity = 48/79 (60.76%), Postives = 53/79 (67.09%), Query Frame = 1
Query: 76 GRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRSQE 312
G VCISILH PGDD GYE ERW+PVHTVE PN ESPANV+AAK R+ +FKKKV +CVRRSQE
Sbjct: 85 GNVCISILHDPGDDKWGYERPEERWLPVHTVETILLSVISMLTDPNFESPANVDAAKMQRENYAEFKKKVAQCVRRSQE 163 HSP 2 Score: 38.5058 bits (88), Expect = 3.353e-25 Identity = 13/24 (54.17%), Postives = 18/24 (75.00%), Query Frame = 3
Query: 6 NYPNSPPTVKFTTEIWHPNVYPDG 77
+YP PP +KF +EIWHPN+ +G
Sbjct: 62 DYPQKPPKMKFISEIWHPNIDKEG 85 The following BLAST results are available for this feature:
BLAST of CK739988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739988 ID=CK739988; Name=CK739988; organism=Citrus sinensis; type=EST; length=484bpback to top |