CK739990

Overview
NameCK739990
Unique NameCK739990
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length431
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7736 contig Csv1_Contig7736:916..1346. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK739990 vs. ExPASy Swiss-Prot
Match: INO1_TOBAC (Inositol-3-phosphate synthase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.462e-20
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 1 
Query:    1 LSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 144
            LSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  463 LSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 510
[Close]
BLAST of CK739990 vs. ExPASy Swiss-Prot
Match: INO1_SESIN (Inositol-3-phosphate synthase OS=Sesamum indicum PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.462e-20
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 1 
Query:    1 LSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 144
            LSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  463 LSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 510
[Close]
BLAST of CK739990 vs. ExPASy Swiss-Prot
Match: INO1_NICPA (Inositol-3-phosphate synthase OS=Nicotiana paniculata GN=INPS1 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.462e-20
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 1 
Query:    1 LSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 144
            LSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  463 LSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 510
[Close]
BLAST of CK739990 vs. ExPASy Swiss-Prot
Match: INO1_MESCR (Inositol-3-phosphate synthase OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.462e-20
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 1 
Query:    1 LSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 144
            LSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  465 LSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 512
[Close]
BLAST of CK739990 vs. ExPASy Swiss-Prot
Match: INO1_CITPA (Inositol-3-phosphate synthase OS=Citrus paradisi PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.462e-20
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 1 
Query:    1 LSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 144
            LSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  460 LSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 507
[Close]
BLAST of CK739990 vs. ExPASy Swiss-Prot
Match: INO1_BRANA (Inositol-3-phosphate synthase OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 1.462e-20
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 1 
Query:    1 LSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 144
            LSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  463 LSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 510
[Close]
BLAST of CK739990 vs. ExPASy Swiss-Prot
Match: INO2_ARATH (Inositol-3-phosphate synthase isozyme 2 OS=Arabidopsis thaliana GN=At2g22240 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 2.494e-20
Identity = 47/48 (97.92%), Postives = 48/48 (100.00%), Query Frame = 1 
Query:    1 LSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 144
            LSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMI+EYK
Sbjct:  463 LSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMIMEYK 510
[Close]
BLAST of CK739990 vs. ExPASy Swiss-Prot
Match: INO1_SPIPO (Inositol-3-phosphate synthase OS=Spirodela polyrrhiza GN=TUR1 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 4.255e-20
Identity = 47/48 (97.92%), Postives = 48/48 (100.00%), Query Frame = 1 
Query:    1 LSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 144
            LSYL+KAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  463 LSYLSKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 510
[Close]
BLAST of CK739990 vs. ExPASy Swiss-Prot
Match: INO3_ARATH (Probable inositol-3-phosphate synthase isozyme 3 OS=Arabidopsis thaliana GN=At5g10170 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.557e-20
Identity = 46/48 (95.83%), Postives = 48/48 (100.00%), Query Frame = 1 
Query:    1 LSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 144
            LSYL+KAPLVPPGTPVVNALSKQRAMLEN+LRACVGLAPENNMILEYK
Sbjct:  463 LSYLSKAPLVPPGTPVVNALSKQRAMLENVLRACVGLAPENNMILEYK 510
[Close]
BLAST of CK739990 vs. ExPASy Swiss-Prot
Match: INO1_ORYSJ (Inositol-3-phosphate synthase OS=Oryza sativa subsp. japonica GN=INO1 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 5.557e-20
Identity = 46/48 (95.83%), Postives = 48/48 (100.00%), Query Frame = 1 
Query:    1 LSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 144
            LSYLTKAPLVPPGTPVVNAL+KQRAMLENI+RACVGLAPENNMILEYK
Sbjct:  463 LSYLTKAPLVPPGTPVVNALAKQRAMLENIMRACVGLAPENNMILEYK 510
The following BLAST results are available for this feature:
BLAST of CK739990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
INO1_TOBAC1.462e-20100.00Inositol-3-phosphate synthase OS=Nicotiana tabacum... [more]
INO1_SESIN1.462e-20100.00Inositol-3-phosphate synthase OS=Sesamum indicum P... [more]
INO1_NICPA1.462e-20100.00Inositol-3-phosphate synthase OS=Nicotiana panicul... [more]
INO1_MESCR1.462e-20100.00Inositol-3-phosphate synthase OS=Mesembryanthemum ... [more]
INO1_CITPA1.462e-20100.00Inositol-3-phosphate synthase OS=Citrus paradisi P... [more]
INO1_BRANA1.462e-20100.00Inositol-3-phosphate synthase OS=Brassica napus PE... [more]
INO2_ARATH2.494e-2097.92Inositol-3-phosphate synthase isozyme 2 OS=Arabido... [more]
INO1_SPIPO4.255e-2097.92Inositol-3-phosphate synthase OS=Spirodela polyrrh... [more]
INO3_ARATH5.557e-2095.83Probable inositol-3-phosphate synthase isozyme 3 O... [more]
INO1_ORYSJ5.557e-2095.83Inositol-3-phosphate synthase OS=Oryza sativa subs... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6484 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE64B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739990 ID=CK739990; Name=CK739990; organism=Citrus sinensis; type=EST; length=431bp
CTCAGCTACCTCACCAAGGCTCCTCTGGTCCCTCCAGGCACACCAGTGGT
GAATGCGCTGTCGAAGCAGCGTGCAATGCTTGAGAACATTCTGAGGGCTT
GCGTTGGCTTGGCTCCTGAGAACAACATGATTTTGGAATACAAGTGAAGA
ACTTGCAGGGGAGAAAAGTGGAAGAACCGGTTTTCCCTTTCTCTGTCACC
AATCAAAGCTGTGGTGGTCCATTTAATTACTGATTGTAATGTCTTGTGTC
ATGAAATTGTGGTTAATATTAGTGTGTCCTGTATGTTTGCTCTTTTATTT
TTTTAATGAAGGTGCTGGAGTGTAGCCCATTGCCTTTGTAGCTCATTTCG
GAGCATGAAATCTCTTGTATTGCAAGTAGATAATATATGGAAGTTCATAA
ATAACTGTATTGCGGCAAAAAAAAAAAAAAA
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