CK739993
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK739993 vs. ExPASy Swiss-Prot
Match: PSAD_SOLLC (Photosystem I reaction center subunit II, chloroplastic OS=Solanum lycopersicum GN=psaD PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 6.663e-47 Identity = 87/89 (97.75%), Postives = 88/89 (98.88%), Query Frame = 2 Query: 80 GFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIIRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYR 346 GFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAI+RQGPNLLKLARKEQCLALGTRLRSKYKI YQFYR Sbjct: 66 GFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKINYQFYR 154 HSP 2 Score: 25.7942 bits (55), Expect = 6.663e-47 Identity = 10/13 (76.92%), Postives = 11/13 (84.62%), Query Frame = 3 Query: 339 FTGIFPNGEVQYL 377 F +FPNGEVQYL Sbjct: 152 FYRVFPNGEVQYL 164
BLAST of CK739993 vs. ExPASy Swiss-Prot
Match: PSAD1_ARATH (Photosystem I reaction center subunit II-1, chloroplastic OS=Arabidopsis thaliana GN=psaD1 PE=1 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 1.228e-45 Identity = 85/90 (94.44%), Postives = 87/90 (96.67%), Query Frame = 2 Query: 77 VGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIIRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYR 346 VGFTPPQLDPNTPSPIF GSTGGLLRKAQVEEFYVITW SPKEQIFEMPTGGAAI+R+GPNLLKLARKEQCLALGTRLRSKYKI YQFYR Sbjct: 65 VGFTPPQLDPNTPSPIFAGSTGGLLRKAQVEEFYVITWNSPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKITYQFYR 154 HSP 2 Score: 25.7942 bits (55), Expect = 1.228e-45 Identity = 10/13 (76.92%), Postives = 11/13 (84.62%), Query Frame = 3 Query: 339 FTGIFPNGEVQYL 377 F +FPNGEVQYL Sbjct: 152 FYRVFPNGEVQYL 164
BLAST of CK739993 vs. ExPASy Swiss-Prot
Match: PSAD_NICSY (Photosystem I reaction center subunit II, chloroplastic OS=Nicotiana sylvestris GN=psaD PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 1.228e-45 Identity = 85/90 (94.44%), Postives = 88/90 (97.78%), Query Frame = 2 Query: 77 VGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIIRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYR 346 VGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAI+R+G NLLKLARKEQCLALGTRLRSKYKI Y+FYR Sbjct: 61 VGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGANLLKLARKEQCLALGTRLRSKYKINYRFYR 150 HSP 2 Score: 25.7942 bits (55), Expect = 1.228e-45 Identity = 10/13 (76.92%), Postives = 11/13 (84.62%), Query Frame = 3 Query: 339 FTGIFPNGEVQYL 377 F +FPNGEVQYL Sbjct: 148 FYRVFPNGEVQYL 160
BLAST of CK739993 vs. ExPASy Swiss-Prot
Match: PSAD2_ARATH (Photosystem I reaction center subunit II-2, chloroplastic OS=Arabidopsis thaliana GN=psaD2 PE=1 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 1.228e-45 Identity = 85/90 (94.44%), Postives = 87/90 (96.67%), Query Frame = 2 Query: 77 VGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIIRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYR 346 VGFTPPQLDPNTPSPIF GSTGGLLRKAQVEEFYVITW SPKEQIFEMPTGGAAI+R+GPNLLKLARKEQCLALGTRLRSKYKI YQFYR Sbjct: 61 VGFTPPQLDPNTPSPIFAGSTGGLLRKAQVEEFYVITWNSPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKITYQFYR 150 HSP 2 Score: 25.7942 bits (55), Expect = 1.228e-45 Identity = 10/13 (76.92%), Postives = 11/13 (84.62%), Query Frame = 3 Query: 339 FTGIFPNGEVQYL 377 F +FPNGEVQYL Sbjct: 148 FYRVFPNGEVQYL 160
BLAST of CK739993 vs. ExPASy Swiss-Prot
Match: PSAD_SPIOL (Photosystem I reaction center subunit II, chloroplastic OS=Spinacia oleracea GN=psaD PE=1 SV=2) HSP 1 Score: 179.874 bits (455), Expect = 1.600e-45 Identity = 85/89 (95.51%), Postives = 88/89 (98.88%), Query Frame = 2 Query: 80 GFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIIRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYR 346 GFTPP+LDPNTPSPIF GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAI+R+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYR Sbjct: 70 GFTPPELDPNTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYR 158 HSP 2 Score: 23.8682 bits (50), Expect = 1.600e-45 Identity = 9/13 (69.23%), Postives = 11/13 (84.62%), Query Frame = 3 Query: 339 FTGIFPNGEVQYL 377 F +FP+GEVQYL Sbjct: 156 FYRVFPSGEVQYL 168
BLAST of CK739993 vs. ExPASy Swiss-Prot
Match: PSAD_CUCSA (Photosystem I reaction center subunit II, chloroplastic OS=Cucumis sativus GN=psaD PE=1 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 4.616e-45 Identity = 83/89 (93.26%), Postives = 88/89 (98.88%), Query Frame = 2 Query: 80 GFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIIRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYR 346 GF+PP+LDP+TPSPIF GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAI+R+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYR Sbjct: 65 GFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYR 153 HSP 2 Score: 25.7942 bits (55), Expect = 4.616e-45 Identity = 10/13 (76.92%), Postives = 11/13 (84.62%), Query Frame = 3 Query: 339 FTGIFPNGEVQYL 377 F +FPNGEVQYL Sbjct: 151 FYRVFPNGEVQYL 163
BLAST of CK739993 vs. ExPASy Swiss-Prot
Match: PSAD_HORVU (Photosystem I reaction center subunit II, chloroplastic OS=Hordeum vulgare GN=psaD PE=1 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 6.524e-44 Identity = 81/89 (91.01%), Postives = 85/89 (95.51%), Query Frame = 2 Query: 80 GFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIIRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYR 346 GF PPQLDP+TPSPIFGGSTGGLLRKAQVEEFYVITW SPKEQ+FEMPTGGAAI+R+GPNLLKLARKEQCLALG RLRSKYKI YQFYR Sbjct: 63 GFVPPQLDPSTPSPIFGGSTGGLLRKAQVEEFYVITWTSPKEQVFEMPTGGAAIMREGPNLLKLARKEQCLALGNRLRSKYKIAYQFYR 151 HSP 2 Score: 25.7942 bits (55), Expect = 6.524e-44 Identity = 10/13 (76.92%), Postives = 11/13 (84.62%), Query Frame = 3 Query: 339 FTGIFPNGEVQYL 377 F +FPNGEVQYL Sbjct: 149 FYRVFPNGEVQYL 161
BLAST of CK739993 vs. ExPASy Swiss-Prot
Match: PSAD_CHLRE (Photosystem I reaction center subunit II, chloroplastic OS=Chlamydomonas reinhardtii GN=psaD PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 3.748e-34 Identity = 68/88 (77.27%), Postives = 78/88 (88.64%), Query Frame = 2 Query: 83 FTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIIRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYR 346 +T P L+P+TPSPIFGGSTGGLLRKAQ EEFYVITWE+ KEQIFEMPTGGAAI+RQGPNLLK +KEQCLAL T+LR+K+K+ FYR Sbjct: 53 WTVPTLNPDTPSPIFGGSTGGLLRKAQTEEFYVITWEAKKEQIFEMPTGGAAIMRQGPNLLKFGKKEQCLALTTQLRNKFKLTPCFYR 140
BLAST of CK739993 vs. ExPASy Swiss-Prot
Match: PSAD_CYAPA (Photosystem I reaction center subunit II, cyanelle OS=Cyanophora paradoxa GN=psaD PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 2.353e-28 Identity = 59/89 (66.29%), Postives = 72/89 (80.90%), Query Frame = 2 Query: 83 FTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIIRQGPNLLKLARKEQCLALGTRLRSKYKI-KYQFYR 346 F+ P L+ N P+PIFGGSTGGLLRKA+VEEFY ITW E +FE+PTGGAAI+R G NLL+LARKEQC+ALG +L+ K+KI Y+ YR Sbjct: 74 FSVPTLNLNAPTPIFGGSTGGLLRKAEVEEFYSITWTGKSETVFELPTGGAAIMRAGENLLRLARKEQCIALGAQLKDKFKITDYKIYR 162
BLAST of CK739993 vs. ExPASy Swiss-Prot
Match: PSAD_GUITH (Photosystem I reaction center subunit II OS=Guillardia theta GN=psaD PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.176e-25 Identity = 56/84 (66.67%), Postives = 67/84 (79.76%), Query Frame = 2 Query: 98 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIIRQGPNLLKLARKEQCLALGTRLRSKYKI-KYQFYR 346 L+ PSP F GSTGG LR A+ EE Y ITW SPKEQ+FEMPTGGAAI+R+G NLL LARKEQCLALGT++++ +KI Y+ YR Sbjct: 5 LNLQIPSPTFEGSTGGWLRAAETEEKYAITWTSPKEQVFEMPTGGAAIMRKGENLLYLARKEQCLALGTQVKTSFKITDYKIYR 88 HSP 2 Score: 23.483 bits (49), Expect = 1.176e-25 Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3 Query: 348 IFPNGEVQYL 377 IFP+GEVQYL Sbjct: 89 IFPSGEVQYL 98 The following BLAST results are available for this feature:
BLAST of CK739993 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739993 ID=CK739993; Name=CK739993; organism=Citrus sinensis; type=EST; length=378bpback to top |