CK740039
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK740039 vs. ExPASy Swiss-Prot
Match: COI1_ARATH (Coronatine-insensitive protein 1 OS=Arabidopsis thaliana GN=COI1 PE=1 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 1.573e-61 Identity = 115/139 (82.73%), Postives = 126/139 (90.65%), Query Frame = 2 Query: 2 KLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCLELEYIAIYVSDITNESLECIGANLRNLCDFRLVLLDREEKIADLPLDNGVRALLMGCDKLRRFGLYLRQGGLTDTGLGYVGQYSLNVRWMLLGCVRETDQGLI 418 +LKRLRIERGADEQGMEDEEGLVSQRGLIALAQGC ELEY+A+YVSDITNESLE IG L+NLCDFRLVLLDREE+I DLPLDNGVR+LL+GC KLRRF YLRQGGLTD GL Y+GQYS NVRWMLLG V E+D+GL+ Sbjct: 343 QLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLM 481
BLAST of CK740039 vs. ExPASy Swiss-Prot
Match: FBX14_ARATH (F-box protein FBX14 OS=Arabidopsis thaliana GN=FBX14 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.303e-12 Identity = 40/124 (32.26%), Postives = 66/124 (53.23%), Query Frame = 2 Query: 50 EDEEGLVSQRGLIALAQGCLELEYIAIYVSDITNESLECIGANLRNLCDFRLVLLDRE--EKIADLPLDNGVRALLMGCDKLRRFGLYLRQGGLTDTGLGYVGQYSLNVRWMLLGCVRETDQGL 415 ED EG VS GL A+++GC +LE I + ++TN ++ + N L FRL ++ R + + P+D+G A++ C KL R + G LTD Y+G+Y +R + + +D+ L Sbjct: 399 EDSEGPVSGVGLQAISEGCRKLESILYFCQNMTNGAVTAMSENCPQLTVFRLCIMGRHRPDHVTGKPMDDGFGAIVKNCKKLTRLAV---SGLLTDEAFSYIGEYGKLIRTLSVAFAGNSDKAL 519
BLAST of CK740039 vs. ExPASy Swiss-Prot
Match: TIR1L_ARATH (Transport inhibitor response 1-like protein OS=Arabidopsis thaliana GN=At5g49980 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.928e-12 Identity = 41/124 (33.06%), Postives = 65/124 (52.42%), Query Frame = 2 Query: 50 EDEEGLVSQRGLIALAQGCLELEYIAIYVSDITNESLECIGANLRNLCDFRLVLLDRE--EKIADLPLDNGVRALLMGCDKLRRFGLYLRQGGLTDTGLGYVGQYSLNVRWMLLGCVRETDQGL 415 ED EG VS+ GL A+++GC +LE I + +TN ++ + N L FRL ++ R + + P+D G A++ C KL R + G LTD Y+G+Y VR + + ++D L Sbjct: 399 EDSEGPVSELGLQAISEGCRKLESILYFCQRMTNAAVIAMSENCPELTVFRLCIMGRHRPDHVTGKPMDEGFGAIVKNCKKLTRLAV---SGLLTDQAFRYMGEYGKLVRTLSVAFAGDSDMAL 519
BLAST of CK740039 vs. ExPASy Swiss-Prot
Match: AFB3_ARATH (Protein AUXIN SIGNALING F-BOX 3 OS=Arabidopsis thaliana GN=AFB3 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.928e-12 Identity = 43/141 (30.50%), Postives = 73/141 (51.77%), Query Frame = 2 Query: 2 KLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCLELEYIAIYVSDITNESLECIGANLRNLCDFRLVLLD--REEKIADLPLDNGVRALLMGCDKLRRFGLYLRQGGLTDTGLGYVGQYSLNVRWMLLGCVRETDQGLI 418 +L+ LR+ +D G ED V++ GL+A++ GC +L I + +TN +L + N N FRL +L+ + + I LD G A++ C LRR + G LTD Y+G Y+ + + + +TD+G++ Sbjct: 335 ELQELRVFP-SDVHGEEDNNASVTEVGLVAISAGCPKLHSILYFCKQMTNAALIAVAKNCPNFIRFRLCILEPHKPDHITFQSLDEGFGAIVQACKGLRRLSV---SGLLTDQVFLYIGMYAEQLEMLSIAFAGDTDKGML 471
BLAST of CK740039 vs. ExPASy Swiss-Prot
Match: AFB2_ARATH (Protein AUXIN SIGNALING F-BOX 2 OS=Arabidopsis thaliana GN=AFB2 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.700e-12 Identity = 37/119 (31.09%), Postives = 63/119 (52.94%), Query Frame = 2 Query: 68 VSQRGLIALAQGCLELEYIAIYVSDITNESLECIGANLRNLCDFRLVLLD--REEKIADLPLDNGVRALLMGCDKLRRFGLYLRQGGLTDTGLGYVGQYSLNVRWMLLGCVRETDQGLI 418 V++ GL+A++ GC +L I + +TN +L + N N FRL +L+ + + + PLD G A++ C LRR L G LTD Y+G Y+ + + + +TD+G++ Sbjct: 354 VTEEGLVAISAGCPKLHSILYFCQQMTNAALVTVAKNCPNFIRFRLCILEPNKPDHVTSQPLDEGFGAIVKACKSLRRLSL---SGLLTDQVFLYIGMYANQLEMLSIAFAGDTDKGML 469
BLAST of CK740039 vs. ExPASy Swiss-Prot
Match: TIRC_ORYSJ (Transport inhibitor response 1-like protein Os11g0515500 OS=Oryza sativa subsp. japonica GN=Os11g0515500 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.672e-11 Identity = 37/118 (31.36%), Postives = 61/118 (51.69%), Query Frame = 2 Query: 68 VSQRGLIALAQGCLELEYIAIYVSDITNESLECIGANLRNLCDFRLVLLD--REEKIADLPLDNGVRALLMGCDKLRRFGLYLRQGGLTDTGLGYVGQYSLNVRWMLLGCVRETDQGL 415 V++ GL+A++ GC +L+ + + +TN +L + N FRL +LD + + PLD G A++ C LRR L G LTDT Y+G Y+ + + + +TD G+ Sbjct: 348 VTEEGLVAISAGCNKLQSVLYFCQRMTNSALITVAKNCPRFTSFRLCVLDPGSADAVTGQPLDEGYGAIVQSCKGLRRLCL---SGLLTDTVFLYIGMYAERLEMLSVAFAGDTDDGM 462 The following BLAST results are available for this feature:
BLAST of CK740039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK740039 ID=CK740039; Name=CK740039; organism=Citrus sinensis; type=EST; length=423bpback to top |