CK740048

Overview
NameCK740048
Unique NameCK740048
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length418
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1234 contig Csv1_Contig1234:671..1088. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK740048 vs. ExPASy Swiss-Prot
Match: METK1_POPTR (S-adenosylmethionine synthetase 1 OS=Populus trichocarpa GN=METK1 PE=2 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 5.603e-67
Identity = 124/139 (89.21%), Postives = 124/139 (89.21%), Query Frame = 1 
Query:    1 HVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDR 417
            HVLATKLGARLTEVRKN TC WLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDR
Sbjct:  142 HVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDR 280
[Close]
BLAST of CK740048 vs. ExPASy Swiss-Prot
Match: METK_PHALU (S-adenosylmethionine synthetase OS=Phaseolus lunatus GN=SAMS PE=2 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 7.318e-67
Identity = 124/139 (89.21%), Postives = 124/139 (89.21%), Query Frame = 1 
Query:    1 HVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDR 417
            HVLATKLGARLTEVRKN TCSWLRPDGKTQVTVEYYND GAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDR
Sbjct:  143 HVLATKLGARLTEVRKNGTCSWLRPDGKTQVTVEYYNDKGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDR 281
[Close]
BLAST of CK740048 vs. ExPASy Swiss-Prot
Match: METK1_BETVU (S-adenosylmethionine synthetase 1 OS=Beta vulgaris GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 7.318e-67
Identity = 123/139 (88.49%), Postives = 124/139 (89.21%), Query Frame = 1 
Query:    1 HVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDR 417
            HVLATKLGARLTEVRKN TC WLRPDGKTQVTVEYYNDNGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDR
Sbjct:  146 HVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNDNGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDR 284
[Close]
BLAST of CK740048 vs. ExPASy Swiss-Prot
Match: METK3_POPTR (S-adenosylmethionine synthetase 3 OS=Populus trichocarpa GN=METK3 PE=2 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 9.558e-67
Identity = 123/139 (88.49%), Postives = 125/139 (89.93%), Query Frame = 1 
Query:    1 HVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDR 417
            HVLATKLGARLTEVRKN TC+WLRPDGKTQVTVEYYN+NGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDR
Sbjct:  143 HVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDR 281
[Close]
BLAST of CK740048 vs. ExPASy Swiss-Prot
Match: METK2_CATRO (S-adenosylmethionine synthetase 2 OS=Catharanthus roseus GN=SAMS2 PE=1 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 9.558e-67
Identity = 122/139 (87.77%), Postives = 124/139 (89.21%), Query Frame = 1 
Query:    1 HVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDR 417
            HVLATKLGARLTEVRKN TC WLRPDGKTQVTVEYYNDNGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPV+PEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDR
Sbjct:  142 HVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNDNGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVVPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDR 280
[Close]
BLAST of CK740048 vs. ExPASy Swiss-Prot
Match: METK5_POPTR (S-adenosylmethionine synthetase 5 OS=Populus trichocarpa GN=METK5 PE=2 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 1.248e-66
Identity = 122/139 (87.77%), Postives = 125/139 (89.93%), Query Frame = 1 
Query:    1 HVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDR 417
            HVLATKLGARLTEVRKN TC+WLRPDGKTQVTVEYYN+NGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDR
Sbjct:  143 HVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNENGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDR 281
[Close]
BLAST of CK740048 vs. ExPASy Swiss-Prot
Match: METK_MESCR (S-adenosylmethionine synthetase OS=Mesembryanthemum crystallinum GN=METK PE=2 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 1.630e-66
Identity = 123/139 (88.49%), Postives = 124/139 (89.21%), Query Frame = 1 
Query:    1 HVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDR 417
            HVLATKLGARLTEVRKN TC WLRPDGKTQVTVEYYN+NGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDR
Sbjct:  142 HVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDR 280
[Close]
BLAST of CK740048 vs. ExPASy Swiss-Prot
Match: METK1_ELAUM (S-adenosylmethionine synthetase 1 OS=Elaeagnus umbellata GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 1.630e-66
Identity = 123/139 (88.49%), Postives = 124/139 (89.21%), Query Frame = 1 
Query:    1 HVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDR 417
            HVLATKLGARLTEVRKN TC WLRPDGKTQVTVEYYN+NGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDR
Sbjct:  142 HVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDR 280
[Close]
BLAST of CK740048 vs. ExPASy Swiss-Prot
Match: METK4_ATRNU (S-adenosylmethionine synthetase 4 OS=Atriplex nummularia GN=SAMS4 PE=1 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 2.129e-66
Identity = 122/139 (87.77%), Postives = 124/139 (89.21%), Query Frame = 1 
Query:    1 HVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDR 417
            HVLATKLGARLTEVRKN TC WLRPDGKTQVTVEYYN+NGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDR
Sbjct:  146 HVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDR 284
[Close]
BLAST of CK740048 vs. ExPASy Swiss-Prot
Match: METK3_ATRNU (S-adenosylmethionine synthetase 3 OS=Atriplex nummularia GN=SAMS3 PE=1 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 2.129e-66
Identity = 122/139 (87.77%), Postives = 124/139 (89.21%), Query Frame = 1 
Query:    1 HVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDR 417
            HVLATKLGARLTEVRKN TC WLRPDGKTQVTVEYYN+NGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDR
Sbjct:  146 HVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDR 284
The following BLAST results are available for this feature:
BLAST of CK740048 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK1_POPTR5.603e-6789.21S-adenosylmethionine synthetase 1 OS=Populus trich... [more]
METK_PHALU7.318e-6789.21S-adenosylmethionine synthetase OS=Phaseolus lunat... [more]
METK1_BETVU7.318e-6788.49S-adenosylmethionine synthetase 1 OS=Beta vulgaris... [more]
METK3_POPTR9.558e-6788.49S-adenosylmethionine synthetase 3 OS=Populus trich... [more]
METK2_CATRO9.558e-6787.77S-adenosylmethionine synthetase 2 OS=Catharanthus ... [more]
METK5_POPTR1.248e-6687.77S-adenosylmethionine synthetase 5 OS=Populus trich... [more]
METK_MESCR1.630e-6688.49S-adenosylmethionine synthetase OS=Mesembryanthemu... [more]
METK1_ELAUM1.630e-6688.49S-adenosylmethionine synthetase 1 OS=Elaeagnus umb... [more]
METK4_ATRNU2.129e-6687.77S-adenosylmethionine synthetase 4 OS=Atriplex numm... [more]
METK3_ATRNU2.129e-6687.77S-adenosylmethionine synthetase 3 OS=Atriplex numm... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6542 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE64G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740048 ID=CK740048; Name=CK740048; organism=Citrus sinensis; type=EST; length=418bp
CATGTCCTTGCCACCAAACTTGGTGCTCGTCTCACGGAGGTTAGGAAGAA
TAGTACCTGCTCTTGGCTAAGGCCCGATGGGAAGACCCAGGTCACTGTTG
AGTACTACAATGACAATGGTGCCATGGTCCCAGTCCGTGTCCACACGGTC
CTCATTTCAACCCAGCATGATGAGACTGTCACAAATGATGAAATTGCTGC
TGACCTTAAGGAGCACGTCATTAAGCCTGTCATCCCCGAGAAGTACCTTG
ATGAGAAGACCATCTTCCACCTTAATCCATCAGGTCGTTTTGTCATTGGT
GGGCCTCATGGTGATGCTGGTCTCACTGGACGTAAGATCATCATCGACAC
TTATGGTGGCTGGGGAGCCCATGGTGGCGGTGCTTTCTCTGGAAAAGACC
CTACTAAGGTGGATAGGA
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