CK740101

Overview
NameCK740101
Unique NameCK740101
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length446
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7835 contig Csv1_Contig7835:876..1321. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK740101 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 1.001e-46
Identity = 84/105 (80.00%), Postives = 94/105 (89.52%), Query Frame = 2
Query:    2 GDAIFIKWICHDWSDEHCVKFLKNCYEALPVNGKVIVAESILPVTPDTSLASKVVIHVDCIMLAHNPGGKERTEQEFRALAKAAGFQGFQVVSSAFNTYIMEFLK 316
            GDAIF+KWICHDWSDEHC+KFLKNCY ALP NGKVI+ E ILPV PD+SLA+K V+H+D IMLAHNPGGKERTEQEF+ALAK AGFQGF V  SAFNTY++EFLK
Sbjct:  259 GDAIFMKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTEQEFQALAKGAGFQGFNVACSAFNTYVIEFLK 363          
BLAST of CK740101 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGU (Caffeic acid 3-O-methyltransferase OS=Eucalyptus gunnii GN=OMT PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 2.913e-46
Identity = 83/107 (77.57%), Postives = 95/107 (88.79%), Query Frame = 2
Query:    2 GDAIFIKWICHDWSDEHCVKFLKNCYEALPVNGKVIVAESILPVTPDTSLASKVVIHVDCIMLAHNPGGKERTEQEFRALAKAAGFQGFQVVSSAFNTYIMEFLKSA 322
            GDAIF+KWICHDWSD+HC KFLKNCY+ALP  GKVIVAE +LPV PDTSLA+K VIH+DCIMLAHNPGGKERT++EF  LAK AGFQGFQV+  AF T++MEFLK+A
Sbjct:  260 GDAIFMKWICHDWSDDHCAKFLKNCYDALPNIGKVIVAECVLPVYPDTSLATKNVIHIDCIMLAHNPGGKERTQKEFETLAKGAGFQGFQVMCCAFGTHVMEFLKTA 366          
BLAST of CK740101 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 8.476e-46
Identity = 83/104 (79.81%), Postives = 94/104 (90.38%), Query Frame = 2
Query:    5 DAIFIKWICHDWSDEHCVKFLKNCYEALPVNGKVIVAESILPVTPDTSLASKVVIHVDCIMLAHNPGGKERTEQEFRALAKAAGFQGFQVVSSAFNTYIMEFLK 316
            DA+F+KWICHDWSDEHC+KFLKNCYEALP NGKVIVAE ILPV PD+SLA+K V+H+D IMLAHNPGGKERT++EF  LAK AGFQGF+V  +AFNTYIMEFLK
Sbjct:  260 DAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEFLK 363          
BLAST of CK740101 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.107e-45
Identity = 81/105 (77.14%), Postives = 93/105 (88.57%), Query Frame = 2
Query:    2 GDAIFIKWICHDWSDEHCVKFLKNCYEALPVNGKVIVAESILPVTPDTSLASKVVIHVDCIMLAHNPGGKERTEQEFRALAKAAGFQGFQVVSSAFNTYIMEFLK 316
            GDAIF+KWICHDWSDEHC+KFLKNCY ALP NGKVI+ E ILPV PDTSLA+K V+H+D +MLAHNPGGKERTEQEF ALAK +GFQG +V  +AFNTY++EFLK
Sbjct:  259 GDAIFMKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDTSLATKGVVHIDVVMLAHNPGGKERTEQEFEALAKGSGFQGIRVACNAFNTYVIEFLK 363          
BLAST of CK740101 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 1.888e-45
Identity = 83/107 (77.57%), Postives = 95/107 (88.79%), Query Frame = 2
Query:    2 GDAIFIKWICHDWSDEHCVKFLKNCYEALPVNGKVIVAESILPVTPDTSLASKVVIHVDCIMLAHNPGGKERTEQEFRALAKAAGFQGFQVVSSAFNTYIMEFLKSA 322
            GDAIF+KWICHDWSDEHC+KFLKNCY ALP +GKVIVAE ILP++PD SLA+K VIH+D IMLAHNPGGKERTE+EF ALA  AGF+GF+V   AFNTY+MEFLK+A
Sbjct:  264 GDAIFMKWICHDWSDEHCLKFLKNCYAALPEHGKVIVAECILPLSPDPSLATKGVIHIDAIMLAHNPGGKERTEKEFEALAIGAGFKGFKVACCAFNTYVMEFLKTA 370          
BLAST of CK740101 vs. ExPASy Swiss-Prot
Match: IEMT_CLABR ((Iso)eugenol O-methyltransferase OS=Clarkia breweri GN=IEMT1 PE=1 SV=2)

HSP 1 Score: 179.104 bits (453), Expect = 7.176e-45
Identity = 82/107 (76.64%), Postives = 96/107 (89.72%), Query Frame = 2
Query:    2 GDAIFIKWICHDWSDEHCVKFLKNCYEALPVNGKVIVAESILPVTPDTSLASKVVIHVDCIMLAHNPGGKERTEQEFRALAKAAGFQGFQVVSSAFNTYIMEFLKSA 322
            GDAIFIKWICHDWSDEHC+K LKNCY ALP +GKVIVAE ILP +PD S+A+KVVIH D +MLA+NPGGKERTE+EF+ALA A+GF+GF+V S AFNTY+MEFLK+A
Sbjct:  262 GDAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRGFKVASCAFNTYVMEFLKTA 368          
BLAST of CK740101 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 1.599e-44
Identity = 81/105 (77.14%), Postives = 93/105 (88.57%), Query Frame = 2
Query:    2 GDAIFIKWICHDWSDEHCVKFLKNCYEALPVNGKVIVAESILPVTPDTSLASKVVIHVDCIMLAHNPGGKERTEQEFRALAKAAGFQGFQVVSSAFNTYIMEFLK 316
            GDAIF+KWICHDWSDEHC+K LKNCY+ALP NGKVI+AE ILP  PD+SLA+K V+H+D I +AHNPGGKERTE+EF ALAKAAGFQGFQV  +AFNTYI+EF K
Sbjct:  235 GDAIFMKWICHDWSDEHCLKLLKNCYDALPNNGKVILAECILPEVPDSSLATKGVVHIDVITVAHNPGGKERTEKEFEALAKAAGFQGFQVFCNAFNTYIIEFSK 339          
BLAST of CK740101 vs. ExPASy Swiss-Prot
Match: OMT1_CHRAE (Quercetin 3-O-methyltransferase 1 OS=Chrysosplenium americanum GN=OMT1 PE=1 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 1.599e-44
Identity = 81/105 (77.14%), Postives = 93/105 (88.57%), Query Frame = 2
Query:    2 GDAIFIKWICHDWSDEHCVKFLKNCYEALPVNGKVIVAESILPVTPDTSLASKVVIHVDCIMLAHNPGGKERTEQEFRALAKAAGFQGFQVVSSAFNTYIMEFLK 316
            GDAIF+KWICHDWSDEHC+K LKNCY+ALP NGKVI+AE ILP  PD+SLA+K V+H+D I +AHNPGGKERTE+EF ALAKAAGFQGFQV  +AFNTYI+EF K
Sbjct:  235 GDAIFMKWICHDWSDEHCLKLLKNCYDALPNNGKVILAECILPEVPDSSLATKGVVHIDVITVAHNPGGKERTEKEFEALAKAAGFQGFQVFCNAFNTYIIEFSK 339          
BLAST of CK740101 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 3.561e-44
Identity = 79/106 (74.53%), Postives = 92/106 (86.79%), Query Frame = 2
Query:    5 DAIFIKWICHDWSDEHCVKFLKNCYEALPVNGKVIVAESILPVTPDTSLASKVVIHVDCIMLAHNPGGKERTEQEFRALAKAAGFQGFQVVSSAFNTYIMEFLKSA 322
            DA+F+KWICHDWSD HC+KFLKNCY+ALP NGKVI+ E ILPV PDTSLA+K V+HVD IMLAHNPGGKERTE+EF  LAK AGFQGF+V+  AFNT+++EF K A
Sbjct:  260 DAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGVVHVDVIMLAHNPGGKERTEKEFEGLAKGAGFQGFEVMCCAFNTHVIEFRKKA 365          
BLAST of CK740101 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 1.036e-43
Identity = 79/105 (75.24%), Postives = 93/105 (88.57%), Query Frame = 2
Query:    2 GDAIFIKWICHDWSDEHCVKFLKNCYEALPVNGKVIVAESILPVTPDTSLASKVVIHVDCIMLAHNPGGKERTEQEFRALAKAAGFQGFQVVSSAFNTYIMEFLK 316
            GDAIF+KWICHDWSDEHCVKFLKNCYE+LP +GKVI+AE ILP TPD+SL++K V+HVDCIMLAHNPGGKERTE+EF ALAKA+GF+G +VV  AF   ++E LK
Sbjct:  257 GDAIFMKWICHDWSDEHCVKFLKNCYESLPEDGKVILAECILPETPDSSLSTKQVVHVDCIMLAHNPGGKERTEKEFEALAKASGFKGIKVVCDAFGVNLIELLK 361          
The following BLAST results are available for this feature:
BLAST of CK740101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
COMT1_PRUDU1.001e-4680.00Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_EUCGU2.913e-4677.57Caffeic acid 3-O-methyltransferase OS=Eucalyptus g... [more]
COMT1_MEDSA8.476e-4679.81Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_ROSCH1.107e-4577.14Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
COMT1_CLABR1.888e-4577.57Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
IEMT_CLABR7.176e-4576.64(Iso)eugenol O-methyltransferase OS=Clarkia brewer... [more]
OMT2_CHRAE1.599e-4477.14Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]
OMT1_CHRAE1.599e-4477.14Quercetin 3-O-methyltransferase 1 OS=Chrysospleniu... [more]
COMT1_POPTM3.561e-4474.53Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
OMT1_ARATH1.036e-4375.24Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6595 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE65D12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740101 ID=CK740101; Name=CK740101; organism=Citrus sinensis; type=EST; length=446bp
GGGAGATGCCATTTTTATCAAGTGGATATGTCATGATTGGAGTGATGAGC
ACTGCGTGAAATTCTTGAAGAACTGCTATGAAGCACTCCCAGTAAATGGG
AAAGTCATTGTTGCTGAATCTATCCTCCCAGTAACCCCGGACACAAGCCT
TGCATCCAAAGTAGTCATCCATGTCGACTGCATCATGTTGGCTCATAACC
CGGGTGGCAAAGAGAGGACTGAACAAGAGTTCAGAGCATTGGCTAAGGCT
GCTGGATTCCAAGGTTTCCAAGTTGTGAGCTCTGCTTTTAATACTTACAT
TATGGAATTTCTCAAGAGTGCTTGAGTCTTTTGTTCTACTGGACTTGCAT
CTCGAATTACCGTGGCTTTCCTATATACGTGTTTCTCTCCATTGCAAAAC
AATAAAAAAGTGAATTTGAGTTTGCTTAAAAAAAAAAAAAAAAAAA
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