CK740170

Overview
NameCK740170
Unique NameCK740170
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length501
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7725 contig Csv1_Contig7725:659..1159. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK740170 vs. ExPASy Swiss-Prot
Match: PSBO_TOBAC (Oxygen-evolving enhancer protein 1, chloroplastic OS=Nicotiana tabacum GN=PSBO PE=2 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 1.719e-73
Identity = 135/143 (94.41%), Postives = 140/143 (97.90%), Query Frame = 2
Query:    2 EKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 430
            EKDGIDYAAVTVQL GGERVPFLFTIKQLVASGKPE+F GEFLVPSYRGSSFLDPKGRGGSTGYDNA+ALPAGGRGDEE+L KEN+KNTSSSTGKITLSVT+SKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE
Sbjct:  190 EKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTSSSTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 332          
BLAST of CK740170 vs. ExPASy Swiss-Prot
Match: PSBO_SOLLC (Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum lycopersicum GN=PSBO PE=2 SV=2)

HSP 1 Score: 271.166 bits (692), Expect = 1.900e-72
Identity = 133/143 (93.01%), Postives = 139/143 (97.20%), Query Frame = 2
Query:    2 EKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 430
            EKDGIDYAAVTVQL GGERVPFLFTIKQLVASGKPE+F GEFLVPSYRGSSFLDPKGRGGSTGYDNA+ALPAGGRGDEE+L KEN+KNT+S TGKITLSVT+SKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE
Sbjct:  187 EKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTASLTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 329          
BLAST of CK740170 vs. ExPASy Swiss-Prot
Match: PSBO_FRIAG (Oxygen-evolving enhancer protein 1, chloroplastic OS=Fritillaria agrestis GN=PSBO PE=2 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 3.034e-70
Identity = 128/143 (89.51%), Postives = 136/143 (95.10%), Query Frame = 2
Query:    2 EKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 430
            EKDGIDYAAVTVQL GGERVPFLFT+KQLVA+GKPE+F G +LVPSYRGSSFLDPKGRGGS GYDNA+ALPAGGRGDEE+L KENIK+ SSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLG+K PKDVKIQGIWYAQLE
Sbjct:  187 EKDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPESFSGSYLVPSYRGSSFLDPKGRGGSAGYDNAVALPAGGRGDEEELVKENIKDVSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGSKAPKDVKIQGIWYAQLE 329          
BLAST of CK740170 vs. ExPASy Swiss-Prot
Match: PSBO_SPIOL (Oxygen-evolving enhancer protein 1, chloroplastic OS=Spinacia oleracea GN=PSBO PE=1 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 1.506e-69
Identity = 127/144 (88.19%), Postives = 136/144 (94.44%), Query Frame = 2
Query:    2 EKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLEQ 433
            EKDGIDYAAVTVQL GGERVPFLFTIKQLVASGKPE+F G+FLVPSYRGSSFLDPKGRGGSTGYDNA+ALPAGGRGDEE+L KEN KN +SS G ITLSVT SKPETGEVIGVF+S+QPSDTDLGAKVPKDVKI+G+WYAQLEQ
Sbjct:  188 EKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPESFSGDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENNKNVASSKGTITLSVTSSKPETGEVIGVFQSLQPSDTDLGAKVPKDVKIEGVWYAQLEQ 331          
BLAST of CK740170 vs. ExPASy Swiss-Prot
Match: PSBO_SOLTU (Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum tuberosum GN=PSBO PE=2 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 2.569e-69
Identity = 127/143 (88.81%), Postives = 135/143 (94.41%), Query Frame = 2
Query:    2 EKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 430
            EKDGIDYAAVTVQL GGERVPFLFTIKQLVASGKPE+F  +FLVPSYRGSSFLDPKGRGGSTGYDNA+ALPAGGRGDEE+L KEN+KNT+S TGKIT +VTKS P+TGEVIGVFESIQPSDTDLGAK PKDVKIQGIWYAQLE
Sbjct:  190 EKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPESFSVDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTASLTGKITFTVTKSNPQTGEVIGVFESIQPSDTDLGAKTPKDVKIQGIWYAQLE 332          
BLAST of CK740170 vs. ExPASy Swiss-Prot
Match: PSBO2_ARATH (Oxygen-evolving enhancer protein 1-2, chloroplastic OS=Arabidopsis thaliana GN=PSBO2 PE=1 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 4.381e-69
Identity = 122/143 (85.31%), Postives = 137/143 (95.80%), Query Frame = 2
Query:    2 EKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 430
            E+DGIDYAAVTVQL GGERVPFLFT+KQL ASGKPE+F G+FLVPSYRGSSFLDPKGRGGSTGYDNA+ALPAGGRGDEE+L+KEN+KNT++S G+ITL +TKSKPETGEVIGVFES+QPSDTDLGAKVPKDVKIQG+WY Q+E
Sbjct:  189 EEDGIDYAAVTVQLPGGERVPFLFTVKQLEASGKPESFSGKFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELSKENVKNTAASVGEITLKITKSKPETGEVIGVFESLQPSDTDLGAKVPKDVKIQGVWYGQIE 331          
BLAST of CK740170 vs. ExPASy Swiss-Prot
Match: PSBO_PEA (Oxygen-evolving enhancer protein 1, chloroplastic OS=Pisum sativum GN=PSBO PE=2 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 9.760e-69
Identity = 126/143 (88.11%), Postives = 135/143 (94.41%), Query Frame = 2
Query:    2 EKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 430
            EKDGIDYAAVTVQL GGERVPFLFTIKQLVASGKP++F GEFLVPSYRGSSFLDPKGRG STGYDNA+ALPAGGRGDEE+L KEN K+ +SS GKITLSVT++KPETGEVIGVFESIQPSDTDLGAK PKDVKIQG+WYAQLE
Sbjct:  186 EKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPDSFSGEFLVPSYRGSSFLDPKGRGASTGYDNAVALPAGGRGDEEELGKENNKSAASSKGKITLSVTQTKPETGEVIGVFESIQPSDTDLGAKAPKDVKIQGVWYAQLE 328          
BLAST of CK740170 vs. ExPASy Swiss-Prot
Match: PSBO1_ARATH (Oxygen-evolving enhancer protein 1-1, chloroplastic OS=Arabidopsis thaliana GN=PSBO1 PE=1 SV=2)

HSP 1 Score: 258.455 bits (659), Expect = 1.275e-68
Identity = 123/143 (86.01%), Postives = 136/143 (95.10%), Query Frame = 2
Query:    2 EKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 430
            E+DGIDYAAVTVQL GGERVPFLFT+KQL ASGKP++F G+FLVPSYRGSSFLDPKGRGGSTGYDNA+ALPAGGRGDEE+L KEN+KNT++S G+ITL VTKSKPETGEVIGVFES+QPSDTDLGAKVPKDVKIQG+WY QLE
Sbjct:  190 EEDGIDYAAVTVQLPGGERVPFLFTVKQLDASGKPDSFTGKFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELVKENVKNTAASVGEITLKVTKSKPETGEVIGVFESLQPSDTDLGAKVPKDVKIQGVWYGQLE 332          
BLAST of CK740170 vs. ExPASy Swiss-Prot
Match: PSBO_WHEAT (Oxygen-evolving enhancer protein 1, chloroplastic OS=Triticum aestivum GN=PSBO PE=2 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 7.238e-64
Identity = 124/143 (86.71%), Postives = 131/143 (91.61%), Query Frame = 2
Query:    2 EKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 430
            EKDGIDYAAVTVQL GGERV FLFT+KQLVA+GKPE+F   FLVPSYRGSSFLDPKGRGGSTGYDNA ALP GGRGDEE+LAKEN+KN SSSTG ITLSVTKSKPETGEVIGVFES+QPSDTDL A  PKDVKIQG+WYAQLE
Sbjct:  184 EKDGIDYAAVTVQLPGGERVAFLFTVKQLVATGKPESFR-PFLVPSYRGSSFLDPKGRGGSTGYDNAGALPRGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLEA--PKDVKIQGVWYAQLE 323          
BLAST of CK740170 vs. ExPASy Swiss-Prot
Match: PSBO_EUGGR (Oxygen-evolving enhancer protein 1, chloroplastic OS=Euglena gracilis GN=PSBO PE=1 SV=2)

HSP 1 Score: 202.601 bits (514), Expect = 8.301e-52
Identity = 98/142 (69.01%), Postives = 115/142 (80.99%), Query Frame = 2
Query:    2 EKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQL 427
            EKDG+DYAA TVQLAGGERVPFLFTIK L+A G    F G+F VPSYRG++FLDPKGRGG++GYD A+ALPA   GD+E+ AKEN K+T++S G I   V K   ETGE+ GVFESIQPSDTDLGAKVPKD+K  G+WYAQ+
Sbjct:  195 EKDGLDYAATTVQLAGGERVPFLFTIKNLLAKGDAGQFLGQFDVPSYRGATFLDPKGRGGASGYDTAVALPAS--GDDEEYAKENSKSTAASVGTIAFKVAKVNAETGEIAGVFESIQPSDTDLGAKVPKDIKTSGVWYAQI 334          
The following BLAST results are available for this feature:
BLAST of CK740170 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
PSBO_TOBAC1.719e-7394.41Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_SOLLC1.900e-7293.01Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_FRIAG3.034e-7089.51Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_SPIOL1.506e-6988.19Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_SOLTU2.569e-6988.81Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO2_ARATH4.381e-6985.31Oxygen-evolving enhancer protein 1-2, chloroplasti... [more]
PSBO_PEA9.760e-6988.11Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO1_ARATH1.275e-6886.01Oxygen-evolving enhancer protein 1-1, chloroplasti... [more]
PSBO_WHEAT7.238e-6486.71Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_EUGGR8.301e-5269.01Oxygen-evolving enhancer protein 1, chloroplastic ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6665 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE66D09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740170 ID=CK740170; Name=CK740170; organism=Citrus sinensis; type=EST; length=501bp
GGAGAAGGATGGAATTGACTATGCTGCTGTGACAGTTCAGCTGGCTGGAG
GCGAGCGTGTGCCCTTCCTTTTCACCATCAAACAATTGGTAGCATCAGGC
AAACCTGAGAATTTCGGAGGAGAATTCCTGGTACCATCTTACCGTGGATC
ATCCTTCTTGGACCCAAAGGGAAGGGGTGGTTCAACTGGTTATGACAATG
CTATTGCATTGCCTGCCGGTGGAAGAGGGGACGAGGAAGATCTCGCCAAG
GAGAATATCAAGAATACTTCATCTTCAACAGGGAAGATCACCCTCAGCGT
TACCAAGAGCAAGCCTGAGACCGGAGAGGTTATTGGAGTGTTTGAGAGCA
TTCAGCCATCTGATACTGATTTGGGAGCCAAGGTTCCAAAGGATGTTAAG
ATCCAGGGTATCTGGTATGCACAGCTTGAGCAATAGAGCTTTTCTTGTAT
GAGTGTACTTATTCCCATTCAGATTTTGAAACATGTTGAAGGTGTTGCTA
A
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