CK740280
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK740280 vs. ExPASy Swiss-Prot
Match: H33_VITVI (Histone H3.3 OS=Vitis vinifera PE=2 SV=3) HSP 1 Score: 229.565 bits (584), Expect = 4.206e-60 Identity = 120/133 (90.23%), Postives = 123/133 (92.48%), Query Frame = 3 Query: 33 MARTKQTARKSTGGKAPRKQPRHKGVQENLLQQPGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR 431 MARTKQTARKSTGGKAPRKQ K +++ GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSA-PTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR 132
BLAST of CK740280 vs. ExPASy Swiss-Prot
Match: H33_TOBAC (Histone H3.3 OS=Nicotiana tabacum GN=H3 PE=1 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 4.206e-60 Identity = 120/133 (90.23%), Postives = 123/133 (92.48%), Query Frame = 3 Query: 33 MARTKQTARKSTGGKAPRKQPRHKGVQENLLQQPGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR 431 MARTKQTARKSTGGKAPRKQ K +++ GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSA-PTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR 132
BLAST of CK740280 vs. ExPASy Swiss-Prot
Match: H33_PINPS (Histone H3.3 OS=Pinus pinaster PE=2 SV=3) HSP 1 Score: 229.565 bits (584), Expect = 4.206e-60 Identity = 120/133 (90.23%), Postives = 123/133 (92.48%), Query Frame = 3 Query: 33 MARTKQTARKSTGGKAPRKQPRHKGVQENLLQQPGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR 431 MARTKQTARKSTGGKAPRKQ K +++ GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSA-PTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR 132
BLAST of CK740280 vs. ExPASy Swiss-Prot
Match: H33_ORYSJ (Histone H3.3 OS=Oryza sativa subsp. japonica GN=H3 PE=2 SV=2) HSP 1 Score: 229.565 bits (584), Expect = 4.206e-60 Identity = 120/133 (90.23%), Postives = 123/133 (92.48%), Query Frame = 3 Query: 33 MARTKQTARKSTGGKAPRKQPRHKGVQENLLQQPGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR 431 MARTKQTARKSTGGKAPRKQ K +++ GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSA-PTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR 132
BLAST of CK740280 vs. ExPASy Swiss-Prot
Match: H33_ORYSI (Histone H3.3 OS=Oryza sativa subsp. indica GN=OsI_011536 PE=2 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 4.206e-60 Identity = 120/133 (90.23%), Postives = 123/133 (92.48%), Query Frame = 3 Query: 33 MARTKQTARKSTGGKAPRKQPRHKGVQENLLQQPGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR 431 MARTKQTARKSTGGKAPRKQ K +++ GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSA-PTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR 132
BLAST of CK740280 vs. ExPASy Swiss-Prot
Match: H33_ORYCO (Histone H3.3 OS=Oryza coarctata PE=2 SV=3) HSP 1 Score: 229.565 bits (584), Expect = 4.206e-60 Identity = 120/133 (90.23%), Postives = 123/133 (92.48%), Query Frame = 3 Query: 33 MARTKQTARKSTGGKAPRKQPRHKGVQENLLQQPGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR 431 MARTKQTARKSTGGKAPRKQ K +++ GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSA-PTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR 132
BLAST of CK740280 vs. ExPASy Swiss-Prot
Match: H33_MEDSA (Histone H3.3 OS=Medicago sativa PE=1 SV=2) HSP 1 Score: 229.565 bits (584), Expect = 4.206e-60 Identity = 120/133 (90.23%), Postives = 123/133 (92.48%), Query Frame = 3 Query: 33 MARTKQTARKSTGGKAPRKQPRHKGVQENLLQQPGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR 431 MARTKQTARKSTGGKAPRKQ K +++ GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSA-PTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR 132
BLAST of CK740280 vs. ExPASy Swiss-Prot
Match: H33_LOLTE (Histone H3.3 OS=Lolium temulentum PE=2 SV=2) HSP 1 Score: 229.565 bits (584), Expect = 4.206e-60 Identity = 120/133 (90.23%), Postives = 123/133 (92.48%), Query Frame = 3 Query: 33 MARTKQTARKSTGGKAPRKQPRHKGVQENLLQQPGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR 431 MARTKQTARKSTGGKAPRKQ K +++ GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSA-PTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR 132
BLAST of CK740280 vs. ExPASy Swiss-Prot
Match: H33_LOLMU (Histone H3.3 OS=Lolium multiflorum GN=RH3 PE=2 SV=3) HSP 1 Score: 229.565 bits (584), Expect = 4.206e-60 Identity = 120/133 (90.23%), Postives = 123/133 (92.48%), Query Frame = 3 Query: 33 MARTKQTARKSTGGKAPRKQPRHKGVQENLLQQPGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR 431 MARTKQTARKSTGGKAPRKQ K +++ GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSA-PTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR 132
BLAST of CK740280 vs. ExPASy Swiss-Prot
Match: H33_GOSHI (Histone H3.3 OS=Gossypium hirsutum GN=HIS3 PE=2 SV=3) HSP 1 Score: 229.565 bits (584), Expect = 4.206e-60 Identity = 120/133 (90.23%), Postives = 123/133 (92.48%), Query Frame = 3 Query: 33 MARTKQTARKSTGGKAPRKQPRHKGVQENLLQQPGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR 431 MARTKQTARKSTGGKAPRKQ K +++ GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSA-PTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR 132 The following BLAST results are available for this feature:
BLAST of CK740280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 192
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740280 ID=CK740280; Name=CK740280; organism=Citrus sinensis; type=EST; length=432bpback to top |