CK740310

Overview
NameCK740310
Unique NameCK740310
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length484
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9283 contig Csv1_Contig9283:72..553. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK740310 vs. ExPASy Swiss-Prot
Match: P2C21_ARATH (Probable protein phosphatase 2C 21 OS=Arabidopsis thaliana GN=PPC4-2 PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 1.635e-60
Identity = 94/129 (72.87%), Postives = 108/129 (83.72%), Query Frame = 2 
Query:   98 HAAYPDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEIYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWASEEGPHSDFHGPTSGSTACVAII 484
            HAA  DLD  TSFFGVYDGHGGK VAKFCAKYLHQQV+ +E Y  GD+ TS ++AF RMD+MM+GQRGWRELA+LGDKM+KFSGMIEGFIWSP+ G+ N+  D W  E+GPHSDF GPTSG TACVA+I
Sbjct:   40 HAAILDLDDKTSFFGVYDGHGGKVVAKFCAKYLHQQVISNEAYKTGDVETSLRRAFFRMDDMMQGQRGWRELAVLGDKMNKFSGMIEGFIWSPRSGDTNNQPDSWPLEDGPHSDFTGPTSGCTACVALI 168

HSP 2 Score: 45.0542 bits (105), Expect = 1.635e-60
Identity = 18/24 (75.00%), Postives = 22/24 (91.67%), Query Frame = 3 
Query:    3 KTEKFSEDGQNENVRYGLSSMQGW 74
            KTEK SEDG+N+ +R+GLSSMQGW
Sbjct:    9 KTEKLSEDGENDKLRFGLSSMQGW 32
[Close]
BLAST of CK740310 vs. ExPASy Swiss-Prot
Match: P2C60_ARATH (Probable protein phosphatase 2C 60 OS=Arabidopsis thaliana GN=At4g31860 PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 2.131e-60
Identity = 95/129 (73.64%), Postives = 109/129 (84.50%), Query Frame = 2 
Query:   98 HAAYPDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEIYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWASEEGPHSDFHGPTSGSTACVAII 484
            HAA  DLD +TSF GVYDGHGGK V+KFCAKYLHQQVL  E Y+AGD+ TS QKAF RMDEMM+GQRGWRELA+LGDK++KFSGMIEG IWSP+ G++ +  D WA EEGPHSDF GP SGSTACVA++
Sbjct:   40 HAAILDLDDNTSFLGVYDGHGGKVVSKFCAKYLHQQVLSDEAYAAGDVGTSLQKAFFRMDEMMQGQRGWRELAVLGDKINKFSGMIEGLIWSPRSGDSANKPDAWAFEEGPHSDFAGPNSGSTACVAVV 168

HSP 2 Score: 46.9802 bits (110), Expect = 2.131e-60
Identity = 19/24 (79.17%), Postives = 22/24 (91.67%), Query Frame = 3 
Query:    3 KTEKFSEDGQNENVRYGLSSMQGW 74
            KT+KFSEDG+N  +RYGLSSMQGW
Sbjct:    9 KTDKFSEDGENHKLRYGLSSMQGW 32
[Close]
BLAST of CK740310 vs. ExPASy Swiss-Prot
Match: P2C58_ORYSJ (Probable protein phosphatase 2C 58 OS=Oryza sativa subsp. japonica GN=Os06g0651600 PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.365e-59
Identity = 93/129 (72.09%), Postives = 109/129 (84.50%), Query Frame = 2 
Query:   98 HAAYPDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEIYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWASEEGPHSDFHGPTSGSTACVAII 484
            H+A  D+D+ TSFFGV+DGHGG+ VAKFCAKYLH++VL+ E YSAGDL  +A KAF RMDEMMRGQRGWREL  LGDK+++ SGMIEG IWSP+G ++ND  DDWA EEGPHSDF GPT GSTACVAI+
Sbjct:   40 HSALLDIDNDTSFFGVFDGHGGRVVAKFCAKYLHREVLRSEAYSAGDLGNAAHKAFFRMDEMMRGQRGWRELQALGDKINQISGMIEGLIWSPRGSDSNDQHDDWAFEEGPHSDFAGPTCGSTACVAIV 168

HSP 2 Score: 43.8986 bits (102), Expect = 1.365e-59
Identity = 17/24 (70.83%), Postives = 22/24 (91.67%), Query Frame = 3 
Query:    3 KTEKFSEDGQNENVRYGLSSMQGW 74
            KTEK SEDG+N+ +++GLSSMQGW
Sbjct:    9 KTEKLSEDGENDKLKFGLSSMQGW 32
[Close]
BLAST of CK740310 vs. ExPASy Swiss-Prot
Match: P2C11_ORYSJ (Probable protein phosphatase 2C 11 OS=Oryza sativa subsp. japonica GN=Os02g0180000 PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.749e-57
Identity = 90/129 (69.77%), Postives = 107/129 (82.95%), Query Frame = 2 
Query:   98 HAAYPDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEIYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWASEEGPHSDFHGPTSGSTACVAII 484
            H+A  +LD+ TSFFGV+DGHGG+ VAKFCAKYLH QVL+ E YSAGDL T+  +AF RMDEMMRGQRGWREL+ LGDK++K  GMIEG IWSP+G ++N+  DDW+ EEGPHSDF GPT G TACVA+I
Sbjct:   40 HSALLNLDNETSFFGVFDGHGGRVVAKFCAKYLHSQVLRSEAYSAGDLGTAVHRAFFRMDEMMRGQRGWRELSALGDKINKIGGMIEGLIWSPRGSDSNNGQDDWSFEEGPHSDFAGPTCGCTACVALI 168

HSP 2 Score: 43.5134 bits (101), Expect = 2.749e-57
Identity = 17/24 (70.83%), Postives = 22/24 (91.67%), Query Frame = 3 
Query:    3 KTEKFSEDGQNENVRYGLSSMQGW 74
            KT+KFSEDG+N+ ++ GLSSMQGW
Sbjct:    9 KTDKFSEDGENDKLKLGLSSMQGW 32
[Close]
BLAST of CK740310 vs. ExPASy Swiss-Prot
Match: P2C70_ORYSJ (Probable protein phosphatase 2C 70 OS=Oryza sativa subsp. japonica GN=Os09g0558000 PE=2 SV=2)

HSP 1 Score: 197.208 bits (500), Expect = 8.641e-56
Identity = 95/129 (73.64%), Postives = 106/129 (82.17%), Query Frame = 2 
Query:   98 HAAYPDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEIYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWASEEGPHSDFHGPTSGSTACVAII 484
            H A P LD  TSFFGVYDGHGGKAV+KFCAK+LH QVLK+E YS+GDL TS  K+F RMDEMM+GQRGWRELA LGDK  KF+GM+EG IWSPK GE++   D W +EEGPHS F GPTSGSTACVAII
Sbjct:   40 HTALPRLDECTSFFGVYDGHGGKAVSKFCAKHLHLQVLKNEAYSSGDLATSVLKSFFRMDEMMKGQRGWRELAELGDKGQKFTGMLEGIIWSPKPGESDKPEDTW-TEEGPHSHFPGPTSGSTACVAII 167

HSP 2 Score: 40.817 bits (94), Expect = 8.641e-56
Identity = 16/24 (66.67%), Postives = 21/24 (87.50%), Query Frame = 3 
Query:    3 KTEKFSEDGQNENVRYGLSSMQGW 74
            KTEK+S +G N+ +RYGL+SMQGW
Sbjct:    9 KTEKYSGEGGNDRLRYGLASMQGW 32
[Close]
BLAST of CK740310 vs. ExPASy Swiss-Prot
Match: P2C17_ORYSJ (Probable protein phosphatase 2C 17 OS=Oryza sativa subsp. japonica GN=Os02g0599150 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.310e-18
Identity = 54/132 (40.91%), Postives = 68/132 (51.52%), Query Frame = 2 
Query:   98 HAAYPDLD--SSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEIYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWASEEGPHSDFHGPT-SGSTACVAII 484
            HAA  +LD  +STSFFGVYDGHGG  VA +CAK  H ++  HE Y   DL+ +    FL MDE ++    WREL I  D          G ++  K G     F        P + + GP   GSTACV +I
Sbjct:   62 HAAILNLDDTTSTSFFGVYDGHGGAEVALYCAKQFHIELCNHEDYH-NDLINALDNVFLSMDENLQQSDAWRELVIPHD---------NGCMYFLKAGVCAKPF--------PQATYTGPAYEGSTACVVVI 175

HSP 2 Score: 29.261 bits (64), Expect = 1.310e-18
Identity = 10/21 (47.62%), Postives = 17/21 (80.95%), Query Frame = 3 
Query:   12 KFSEDGQNENVRYGLSSMQGW 74
            KF+ + +N+ ++Y +SSMQGW
Sbjct:   34 KFTFEEENDRIKYVVSSMQGW 54
[Close]
BLAST of CK740310 vs. ExPASy Swiss-Prot
Match: P2C16_ORYSJ (Probable protein phosphatase 2C 16 OS=Oryza sativa subsp. japonica GN=Os02g0598400 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.319e-18
Identity = 54/132 (40.91%), Postives = 68/132 (51.52%), Query Frame = 2 
Query:   98 HAAYPDLD--SSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEIYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWASEEGPHSDFHGPT-SGSTACVAII 484
            HAA  +LD  +STSFFGVYDGHGG  VA +CAK  H ++  HE Y   DL+ +    FL MDE ++    WREL I  D          G ++  K G     F        P + + GP   GSTACV +I
Sbjct:   38 HAAILNLDDATSTSFFGVYDGHGGAEVALYCAKQFHIELCNHEDYH-NDLINALDNVFLSMDENLQQSDAWRELVIPHD---------NGCMYFLKAGVCAKPF--------PQATYTGPAYEGSTACVVVI 151

HSP 2 Score: 29.261 bits (64), Expect = 1.319e-18
Identity = 10/21 (47.62%), Postives = 17/21 (80.95%), Query Frame = 3 
Query:   12 KFSEDGQNENVRYGLSSMQGW 74
            KF+ + +N+ ++Y +SSMQGW
Sbjct:   10 KFTFEEENDRIKYVVSSMQGW 30
[Close]
BLAST of CK740310 vs. ExPASy Swiss-Prot
Match: P2C20_ORYSJ (Probable protein phosphatase 2C 20 OS=Oryza sativa subsp. japonica GN=Os02g0600000 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 3.262e-16
Identity = 49/131 (37.40%), Postives = 69/131 (52.67%), Query Frame = 2 
Query:   98 HAAYPDLDSS-TSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEIYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWASEEGPHSDFHGPT-SGSTACVAII 484
            HAA  +LD + TSFFGVYDGHGG  VA +CAK  H ++  HE Y + +L  + + AF  MDE ++    WREL I  +          G+++  K G   +          P + +  P+  GSTACV +I
Sbjct:   87 HAAILNLDDTMTSFFGVYDGHGGAEVASYCAKRFHIELCNHEDYDS-NLSNAMRSAFYSMDEDLQLSDAWRELVIPRN---------NGWMYFIKAGVCAN------LSPFPQATYTAPSYEGSTACVVVI 201

HSP 2 Score: 31.187 bits (69), Expect = 3.262e-16
Identity = 10/21 (47.62%), Postives = 18/21 (85.71%), Query Frame = 3 
Query:   12 KFSEDGQNENVRYGLSSMQGW 74
            KF+++ +N+ ++Y +SSMQGW
Sbjct:   59 KFTDEKENDRIKYVVSSMQGW 79
[Close]
BLAST of CK740310 vs. ExPASy Swiss-Prot
Match: P2C19_ORYSJ (Probable protein phosphatase 2C 19 OS=Oryza sativa subsp. japonica GN=Os02g0599700 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 3.430e-15
Identity = 37/75 (49.33%), Postives = 48/75 (64.00%), Query Frame = 2 
Query:   98 HAAYPDLDSS-TSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEIYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAI 319
            HAA  +LD + TSFFGVYDGHGG  VA +CAK  H ++  HE Y + +L  + + AF  MDE ++    WREL I
Sbjct:  282 HAAILNLDDTMTSFFGVYDGHGGAEVASYCAKRFHIELCNHEDYDS-NLSNAMRSAFYSMDEDLQLSDAWRELVI 355

HSP 2 Score: 31.187 bits (69), Expect = 3.430e-15
Identity = 10/21 (47.62%), Postives = 18/21 (85.71%), Query Frame = 3 
Query:   12 KFSEDGQNENVRYGLSSMQGW 74
            KF+++ +N+ ++Y +SSMQGW
Sbjct:  254 KFTDEKENDRIKYVVSSMQGW 274
[Close]
BLAST of CK740310 vs. ExPASy Swiss-Prot
Match: P2C18_ORYSJ (Probable protein phosphatase 2C 18 OS=Oryza sativa subsp. japonica GN=Os02g0599200 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 4.436e-15
Identity = 51/131 (38.93%), Postives = 66/131 (50.38%), Query Frame = 2 
Query:   98 HAAYPDLD--SSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEIYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWASEEGPHSDFHGPTSGSTACVAII 484
            HAA   LD  +STSFFGVYDGHGG  VA +CAK  H ++  HE Y   DL  +    F  MDE ++    WREL I  D          G+++  K G   + +    +  GP  +      GSTACV +I
Sbjct:  146 HAAILSLDDTTSTSFFGVYDGHGGAEVASYCAKRFHIELCNHEDYH-NDLTNALDNVFFSMDENLQQSDAWRELVIPRD---------NGWMYFLKAGVCANFWPFPQAYTGPAYE------GSTACVVVI 260

HSP 2 Score: 22.3274 bits (46), Expect = 4.436e-15
Identity = 8/20 (40.00%), Postives = 15/20 (75.00%), Query Frame = 3 
Query:   12 KFSEDGQNENVRYGLSSMQG 71
            K + + +N+ ++Y +SSMQG
Sbjct:  118 KVTVEEENDRIKYIVSSMQG 137
The following BLAST results are available for this feature:
BLAST of CK740310 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
P2C21_ARATH1.635e-6072.87Probable protein phosphatase 2C 21 OS=Arabidopsis ... [more]
P2C60_ARATH2.131e-6073.64Probable protein phosphatase 2C 60 OS=Arabidopsis ... [more]
P2C58_ORYSJ1.365e-5972.09Probable protein phosphatase 2C 58 OS=Oryza sativa... [more]
P2C11_ORYSJ2.749e-5769.77Probable protein phosphatase 2C 11 OS=Oryza sativa... [more]
P2C70_ORYSJ8.641e-5673.64Probable protein phosphatase 2C 70 OS=Oryza sativa... [more]
P2C17_ORYSJ1.310e-1840.91Probable protein phosphatase 2C 17 OS=Oryza sativa... [more]
P2C16_ORYSJ1.319e-1840.91Probable protein phosphatase 2C 16 OS=Oryza sativa... [more]
P2C20_ORYSJ3.262e-1637.40Probable protein phosphatase 2C 20 OS=Oryza sativa... [more]
P2C19_ORYSJ3.430e-1549.33Probable protein phosphatase 2C 19 OS=Oryza sativa... [more]
P2C18_ORYSJ4.436e-1538.93Probable protein phosphatase 2C 18 OS=Oryza sativa... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_6454 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE63F12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740310 ID=CK740310; Name=CK740310; organism=Citrus sinensis; type=EST; length=484bp
CCAAGACTGAGAAGTTCTCGGAGGATGGTCAAAATGAGAATGTTCGATAT
GGATTGTCGTCGATGCAGGGGTGGCCGTGCGACCATGGAAGATGCCTCAT
GCAGCTTATCCAGATTTGGACAGTTCTACATCTTTCTTTGGTGTTTATGA
TGGCCACGGTGGTAAAGCAGTGGCCAAATTTTGTGCCAAGTATCTTCACC
AGCAGGTGCTCAAACATGAAATTTATTCAGCTGGAGATTTAGTCACTTCA
GCACAGAAAGCTTTTCTCAGAATGGATGAGATGATGCGTGGACAAAGGGG
ATGGAGAGAATTAGCTATACTGGGAGATAAAATGGACAAGTTTTCTGGCA
TGATTGAGGGGTTCATATGGTCTCCTAAGGGTGGTGAAGCCAATGATCAT
TTTGACGATTGGGCATCGGAGGAGGGTCCTCACTCAGATTTTCATGGACC
AACTTCTGGAAGTACAGCTTGCGTAGCAATCATT
back to top