CK932652
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932652 vs. ExPASy Swiss-Prot
Match: COPE1_ARATH (Coatomer subunit epsilon-1 OS=Arabidopsis thaliana GN=At1g30630 PE=2 SV=1) HSP 1 Score: 402.519 bits (1033), Expect = 1.300e-111 Identity = 194/227 (85.46%), Postives = 217/227 (95.59%), Query Frame = 1 Query: 91 PDHLFNLRNNFYLGAYQAAINNSDLTNLPPDDAVERDCLVYRSYIALGSYQLVISEIDESAATPLQAVKLLALYLSSPDNKESTISSLKEWLSDPAIGSNATLRLIAGIIFMHEEDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAEGLLLDAL 771 PDHLFNLRN+FYLGAYQAAINNS++ NL +D VERDCLV+R+YIALGSYQLVISEIDE+AATPLQAVKLLA+YLSSP+NKESTISSL+EWL+DP +G+NA +RLIAG IFMHEEDYNEALKHT++GGTM+LHALNVQIF+KMHRSD+AE+QLR MQQIDEDHTLTQLA+AWLNLAVGGSKIQEAYLIFQDFSEKYPMT LILNGKAVCCMHMGNF+EAE LLL+AL Sbjct: 7 PDHLFNLRNHFYLGAYQAAINNSEIPNLSQEDIVERDCLVHRAYIALGSYQLVISEIDEAAATPLQAVKLLAMYLSSPENKESTISSLREWLADPTVGNNAIIRLIAGTIFMHEEDYNEALKHTHSGGTMDLHALNVQIFIKMHRSDFAEKQLRVMQQIDEDHTLTQLASAWLNLAVGGSKIQEAYLIFQDFSEKYPMTSLILNGKAVCCMHMGNFEEAETLLLEAL 233
BLAST of CK932652 vs. ExPASy Swiss-Prot
Match: COPE2_ARATH (Coatomer subunit epsilon-2 OS=Arabidopsis thaliana GN=At2g34840 PE=2 SV=1) HSP 1 Score: 400.593 bits (1028), Expect = 4.939e-111 Identity = 196/227 (86.34%), Postives = 215/227 (94.71%), Query Frame = 1 Query: 91 PDHLFNLRNNFYLGAYQAAINNSDLTNLPPDDAVERDCLVYRSYIALGSYQLVISEIDESAATPLQAVKLLALYLSSPDNKESTISSLKEWLSDPAIGSNATLRLIAGIIFMHEEDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAEGLLLDAL 771 PDHLFNLRNNFYLGAYQ AINNS++ NL P++AVERDCLV+RSYIALGSYQLVISEIDESAATPLQAVKLLA+YLS+P NKESTISSLKEWL+D IG+N TLRLIAGIIFMHEEDYNE LKHT+AGGTM+L+ALNVQIF+KMHR++YAE+QLR MQQIDEDHTLTQLA+AWLNLAVGGSKIQEAYLIF+DFSEKYPMT LILNGKAVCCM MGNFDEAE LLL+AL Sbjct: 8 PDHLFNLRNNFYLGAYQTAINNSEIANLSPENAVERDCLVFRSYIALGSYQLVISEIDESAATPLQAVKLLAMYLSTPQNKESTISSLKEWLADSTIGNNDTLRLIAGIIFMHEEDYNETLKHTHAGGTMDLYALNVQIFIKMHRAEYAEKQLRVMQQIDEDHTLTQLASAWLNLAVGGSKIQEAYLIFEDFSEKYPMTCLILNGKAVCCMQMGNFDEAETLLLEAL 234
BLAST of CK932652 vs. ExPASy Swiss-Prot
Match: COPE1_ORYSJ (Coatomer subunit epsilon-1 OS=Oryza sativa subsp. japonica GN=COPE1 PE=2 SV=1) HSP 1 Score: 367.851 bits (943), Expect = 3.548e-101 Identity = 183/227 (80.62%), Postives = 205/227 (90.31%), Query Frame = 1 Query: 91 PDHLFNLRNNFYLGAYQAAINNSDLTNLPPDDAVERDCLVYRSYIALGSYQLVISEIDESAATPLQAVKLLALYLSSPDNKESTISSLKEWLSDPAIGSNATLRLIAGIIFMHEEDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAEGLLLDAL 771 PD LFNLRN FYLGAYQAAINNSD+ L D A ERD +V+RSY+ALGSYQLVISEID SAAT LQAVKLLALYLS +KES I SLKEWLSD A+GSN LRLIAGIIFMHE+DY EALKHT++GGT++LHALNVQIF+KMHRSDYAE+QL+ MQQIDEDHTLTQLANAWL++AVGGSKI+EAYLIFQDF+EKYPMTG++LNGKAVCCMHMG+FDEAE LLL+AL Sbjct: 4 PDLLFNLRNLFYLGAYQAAINNSDVPGLDADAAAERDAIVFRSYVALGSYQLVISEIDSSAATSLQAVKLLALYLSG--DKESAIVSLKEWLSDSAVGSNPVLRLIAGIIFMHEQDYTEALKHTHSGGTLDLHALNVQIFIKMHRSDYAEKQLKIMQQIDEDHTLTQLANAWLDIAVGGSKIREAYLIFQDFAEKYPMTGMVLNGKAVCCMHMGSFDEAETLLLEAL 228
BLAST of CK932652 vs. ExPASy Swiss-Prot
Match: COPE2_ORYSJ (Coatomer subunit epsilon-2 OS=Oryza sativa subsp. japonica GN=Os04g0644700 PE=3 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 1.268e-82 Identity = 157/232 (67.67%), Postives = 183/232 (78.88%), Query Frame = 1 Query: 91 PDHLFNLRNNFYLGAYQAAINNSDL----TNLPPDDAVERDCLVYRSYIALGSYQLVISEIDESAATPLQAVKLLALYLSS-PDNKESTISSLKEWLSDPAIGSNATLRLIAGIIFMHEEDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAEGLLLDAL 771 PDHLF LRN+FY+GAYQA I L PD ERD L+YRSYIA+GS+QLVI EI AATPLQAV+LL +YLS KES I L E L+D A+GSN LRL+AG + MHE DY ALKHTN+GGTMEL A+NVQI L+MHRSD+AE+QLR MQQ+DEDHTLTQLANAW++L +GGSKIQEA+LIFQD SEKYP T LILNGKA+C MHMGNF++AEGLLL++L Sbjct: 7 PDHLFGLRNSFYVGAYQAVITGVQAIPARAALSPDALAERDSLLYRSYIAIGSHQLVIDEIGPGAATPLQAVRLLTVYLSGGAGGKESAIRKLNELLADDAVGSNPILRLVAGTVLMHERDYAGALKHTNSGGTMELLAMNVQICLQMHRSDHAEKQLRIMQQLDEDHTLTQLANAWVDLVMGGSKIQEAHLIFQDLSEKYPATCLILNGKALCLMHMGNFEDAEGLLLESL 238
BLAST of CK932652 vs. ExPASy Swiss-Prot
Match: COPE2_ORYSI (Coatomer subunit epsilon-2 OS=Oryza sativa subsp. indica GN=H0413E07.10 PE=3 SV=2) HSP 1 Score: 304.679 bits (779), Expect = 3.688e-82 Identity = 157/232 (67.67%), Postives = 183/232 (78.88%), Query Frame = 1 Query: 91 PDHLFNLRNNFYLGAYQAAINNSDL----TNLPPDDAVERDCLVYRSYIALGSYQLVISEIDESAATPLQAVKLLALYLSS-PDNKESTISSLKEWLSDPAIGSNATLRLIAGIIFMHEEDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAEGLLLDAL 771 PDHLF LR +FY+GAYQA I L PD ERD L+YRSYIA+GS+QLVI EI AATPLQAV+LLA+YLS KES I L E L+D A+GSN LRL+AG + MHE DY ALKHTN+GGTMEL A+NVQI L+MHRSD+AE+QLR MQQ+DEDHTLTQLANAW++L +GGSKIQEA+LIFQD SEKYP T LILNGKA+C MHMGNF++AEGLLL++L Sbjct: 7 PDHLFGLRYSFYVGAYQAVITGVQAIPARAALSPDALAERDSLLYRSYIAIGSHQLVIDEIGPGAATPLQAVRLLAVYLSGGAGGKESAIRKLNELLADDAVGSNPILRLVAGTVLMHERDYAGALKHTNSGGTMELLAMNVQICLQMHRSDHAEKQLRIMQQLDEDHTLTQLANAWVDLVMGGSKIQEAHLIFQDLSEKYPATCLILNGKALCLMHMGNFEDAEGLLLESL 238
BLAST of CK932652 vs. ExPASy Swiss-Prot
Match: COPE_CHICK (Coatomer subunit epsilon OS=Gallus gallus GN=COPE PE=2 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 4.116e-49 Identity = 98/227 (43.17%), Postives = 154/227 (67.84%), Query Frame = 1 Query: 94 DHLFNLRNNFYLGAYQAAINNSD-LTNLPPDDAVERDCLVYRSYIALGSYQLVISEIDESAATPLQAVKLLALYLSSPDNKESTISSLKEWLSDPAIGSNATLRLIAGIIFMHEEDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAEGLLLDAL 771 D LF+++N+FY+GAYQAAIN + + P+ ERD ++RSYIA Y +V+ EI +A+ LQAV++ A YLS+ +++ ++ L + ++ +N T L+A I+ H+++ + AL+ + G ++E A+ +QI LK+ R D A ++L+ MQ+ DED TLTQLA AW+NLA+GG K+Q+AY IFQ+ ++K T L+LNG+A C M G +D+AEG+L +AL Sbjct: 17 DELFDVKNSFYIGAYQAAINEAQRIKPSNPEKETERDVFLFRSYIAQRKYGVVLDEIKANASPELQAVRMFAEYLSNESQRDAIVADLDKKMAKSVDVANTTFLLMAASIYFHDKNPDAALRTLHQGESLECMAMMIQILLKLDRLDLARKELKKMQEQDEDATLTQLATAWVNLAIGGEKLQDAYYIFQEMADKCSSTLLLLNGQAACYMAQGKWDDAEGVLQEAL 243
BLAST of CK932652 vs. ExPASy Swiss-Prot
Match: COPE_CRIGR (Coatomer subunit epsilon OS=Cricetulus griseus GN=COPE PE=2 SV=2) HSP 1 Score: 189.889 bits (481), Expect = 1.324e-47 Identity = 98/227 (43.17%), Postives = 148/227 (65.20%), Query Frame = 1 Query: 94 DHLFNLRNNFYLGAYQAAINNSDLTNLP-PDDAVERDCLVYRSYIALGSYQLVISEIDESAATPLQAVKLLALYLSSPDNKESTISSLKEWLSDPAIGSNATLRLIAGIIFMHEEDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAEGLLLDAL 771 D LF+++N FY+G+YQ IN + L PD VERD +YR+YIA Y +V+ EI S+A LQAV++ A YL++ + +++ + L +S +N T L+A ++ H+++ + AL+ + G ++E A+ +QI LK+ R D A ++L+ MQ DED TLTQLA AW+NLAVGG K+QEAY IFQ+ ++K T L+LNG+A C G ++ AEG+L +AL Sbjct: 17 DELFDVKNAFYIGSYQQCINEAQRVKLSSPDREVERDVFLYRAYIAQRKYGVVLDEIKPSSAPELQAVRMFADYLATENRRDAIVVELDREMSRSVDVTNTTFLLMAASVYFHDQNPDAALRTLHQGDSLECMAMTIQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVNLAVGGEKLQEAYYIFQELADKCSPTLLLLNGQAACHSAQGRWETAEGVLQEAL 243
BLAST of CK932652 vs. ExPASy Swiss-Prot
Match: COPE_PONAB (Coatomer subunit epsilon OS=Pongo abelii GN=COPE PE=2 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.729e-47 Identity = 97/227 (42.73%), Postives = 149/227 (65.64%), Query Frame = 1 Query: 94 DHLFNLRNNFYLGAYQAAINNSDLTNLP-PDDAVERDCLVYRSYIALGSYQLVISEIDESAATPLQAVKLLALYLSSPDNKESTISSLKEWLSDPAIGSNATLRLIAGIIFMHEEDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAEGLLLDAL 771 D LF+++N FY+G+YQ IN + L P+ VERD +YR+Y+A + +V+ EI S+A LQAV++ A YL+ ++S ++ L +S +N T L+A I++H+++ + AL+ + G ++E A+ VQI LK+ R D A ++L+ MQ +DED TLTQLA AW++LA GG K+Q+AY IFQ+ ++K T L+LNG+A C M G ++ AEGLL +AL Sbjct: 17 DELFDVKNAFYIGSYQQCINEAQRVKLSSPETDVERDVFLYRAYLAQRKFGVVLDEIKPSSAPELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGLLQEAL 243
BLAST of CK932652 vs. ExPASy Swiss-Prot
Match: COPE_MOUSE (Coatomer subunit epsilon OS=Mus musculus GN=Cope PE=2 SV=3) HSP 1 Score: 189.504 bits (480), Expect = 1.729e-47 Identity = 99/227 (43.61%), Postives = 147/227 (64.76%), Query Frame = 1 Query: 94 DHLFNLRNNFYLGAYQAAINNSDLTNLP-PDDAVERDCLVYRSYIALGSYQLVISEIDESAATPLQAVKLLALYLSSPDNKESTISSLKEWLSDPAIGSNATLRLIAGIIFMHEEDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAEGLLLDAL 771 D LF+++N FY+G+YQ IN + L P+ VERD +YR+Y+A Y +V+ EI S+A LQAV++ A YL+S + ++S + L +S +N T L+A I+ H+++ + AL+ + G +E A+ +QI LK+ R D A ++L+ MQ DED TLTQLA AW+NLAVGG K+QEAY IFQ+ ++K T L+LNG+A C G ++ AEG+L +AL Sbjct: 17 DELFDVKNAFYIGSYQQCINEAQRVKLSSPEREVERDVFLYRAYLAQRKYGVVLDEIKPSSAPELQAVRMFAEYLASENQRDSIVLELDREMSRSVDVTNTTFLLMAASIYFHDQNPDAALRTLHQGDGLECMAMTIQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVNLAVGGEKLQEAYYIFQELADKCSPTLLLLNGQAACHSAQGRWETAEGVLQEAL 243
BLAST of CK932652 vs. ExPASy Swiss-Prot
Match: COPE_HUMAN (Coatomer subunit epsilon OS=Homo sapiens GN=COPE PE=1 SV=3) HSP 1 Score: 189.119 bits (479), Expect = 2.259e-47 Identity = 97/227 (42.73%), Postives = 149/227 (65.64%), Query Frame = 1 Query: 94 DHLFNLRNNFYLGAYQAAINNSDLTNLP-PDDAVERDCLVYRSYIALGSYQLVISEIDESAATPLQAVKLLALYLSSPDNKESTISSLKEWLSDPAIGSNATLRLIAGIIFMHEEDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAEGLLLDAL 771 D LF+++N FY+G+YQ IN + L P+ VERD +YR+Y+A + +V+ EI S+A LQAV++ A YL+ ++S ++ L +S +N T L+A I++H+++ + AL+ + G ++E A+ VQI LK+ R D A ++L+ MQ +DED TLTQLA AW++LA GG K+Q+AY IFQ+ ++K T L+LNG+A C M G ++ AEGLL +AL Sbjct: 17 DELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIKPSSAPELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGLLQEAL 243 The following BLAST results are available for this feature:
BLAST of CK932652 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932652 ID=CK932652; Name=CK932652; organism=Citrus sinensis; type=EST; length=773bpback to top |