CK932671

Overview
NameCK932671
Unique NameCK932671
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length571
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK932671 vs. ExPASy Swiss-Prot
Match: PFPA_SOLTU (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 3.411e-56
Identity = 103/140 (73.57%), Postives = 115/140 (82.14%), Query Frame = 2 
Query:  125 MDSDFGIPRELSGLQQLRSLYQPELPPCLQGTTVRVEFGDSTTTADPADTHSISRSFPHTYGQPLAHFLRATAKVPDAQIITEHPAIRVGIVFCGGQSPGGHNVVWGLYDALKLRNPKSTXXXXXXXXXXXXAQKTLEVT 544
            MD+D+GIPRELS LQ+LRS Y PELPPCLQGTTVRVE  D+TT ADPA  H+I R FPHTYGQPLAHFLRATAKVPDAQIITEHPAIRVG++FCG QSPGGHNV+WGL+DALK+ NPK+             AQKTLE+T
Sbjct:    1 MDADYGIPRELSDLQKLRSHYHPELPPCLQGTTVRVELRDATTAADPAGEHTIKRFFPHTYGQPLAHFLRATAKVPDAQIITEHPAIRVGVLFCGRQSPGGHNVIWGLHDALKVHNPKNILLGFLGGSEGLFAQKTLEIT 140
[Close]
BLAST of CK932671 vs. ExPASy Swiss-Prot
Match: PFPA_RICCO (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Ricinus communis GN=PFP-ALPHA PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 4.455e-56
Identity = 105/140 (75.00%), Postives = 114/140 (81.43%), Query Frame = 2 
Query:  125 MDSDFGIPRELSGLQQLRSLYQPELPPCLQGTTVRVEFGDSTTTADPADTHSISRSFPHTYGQPLAHFLRATAKVPDAQIITEHPAIRVGIVFCGGQSPGGHNVVWGLYDALKLRNPKSTXXXXXXXXXXXXAQKTLEVT 544
            MDSDFGIPRELS LQ+LRSLY+PELPPCLQGTTVRVE GD TT    A  H+ISRSFPHTYGQPLAHFLRATAKV DA II+EHPA+RVG+VFCG QSPGGHNVVWGL++ALK+ NP ST            AQKTLEVT
Sbjct:    1 MDSDFGIPRELSDLQKLRSLYKPELPPCLQGTTVRVELGDGTTACSEAGAHTISRSFPHTYGQPLAHFLRATAKVADAHIISEHPAMRVGVVFCGRQSPGGHNVVWGLHNALKIHNPNSTLLGFLGGSEGLFAQKTLEVT 140
The following BLAST results are available for this feature:
BLAST of CK932671 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
PFPA_SOLTU3.411e-5673.57Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
PFPA_RICCO4.455e-5675.00Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004531_A12 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIIF_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932671 ID=CK932671; Name=CK932671; organism=Citrus sinensis; type=EST; length=571bp
GCGGGGGTAACAANNNAAACAAAAACCCCAATCAGTATAGTAGTACTGCA
TACAACACAGTCAATACCAAATACCAAAAAAAACGCAACAAACAGTAATA
ACCATCCACTGAAACGAAAACACAATGGACTCGGATTTCGGTATTCCGAG
AGAACTCTCCGGCCTTCAACAACTCCGATCTCTTTACCAGCCCGAGCTCC
CTCCTTGCCTTCAGGGAACTACTGTCAGGGTGGAATTTGGTGATTCAACT
ACAACTGCTGACCCAGCTGATACCCATTCCATTAGCCGATCCTTTCCTCA
CACTTACGGTCAGCCTTTGGCTCACTTTCTTAGAGCAACTGCCAAAGTAC
CTGATGCTCAAATTATAACTGAGCATCCTGCTATTAGGGTGGGAATTGTC
TTCTGTGGAGGACAATCTCCTGGTGGACACAATGTCGTTTGGGGCCTTTA
CGATGCGCTCAAGCTACGCAACCCTAAGAGTACTTTGCTTGGATTTTTGG
GTGGTTCTGAAGGTTTATTTGCACAGAAAACTCTTGAGGTCACAAAAAAA
AAAAAAAAAAAAAAAAAAAAA
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