CK932739

Overview
NameCK932739
Unique NameCK932739
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length372
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6120 contig Csv1_Contig6120:1448..1820. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK932739 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.783e-22
Identity = 39/56 (69.64%), Postives = 44/56 (78.57%), Query Frame = 2 
Query:   71 SMLGHLLHHFWWAPAKGVKPEEIDMAGNPGQVTYMTTPLEVVATPRLADHGLYKRV 238
            SMLGHLLHHF W P +G+KPEEIDM  NPG VTYM TP++ V +PRL  H LYKRV
Sbjct:  451 SMLGHLLHHFCWTPPEGMKPEEIDMGENPGLVTYMRTPIQAVVSPRLPSH-LYKRV 505

HSP 2 Score: 41.5874 bits (96), Expect = 2.783e-22
Identity = 17/19 (89.47%), Postives = 18/19 (94.74%), Query Frame = 3 
Query:    6 LLPFGSGRRICPGIQLGIN 62
            LLPFGSGRR+CPG QLGIN
Sbjct:  429 LLPFGSGRRVCPGAQLGIN 447
[Close]
BLAST of CK932739 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.621e-22
Identity = 41/62 (66.13%), Postives = 47/62 (75.81%), Query Frame = 2 
Query:   65 LTSMLGHLLHHFWWAPAKGVKPEEIDMAGNPGQVTYMTTPLEVVATPRLADHGLYKRVLVDM 250
            +TSM+ HLLHHF W P +G KPEEIDM+ NPG VTYM TP++ VATPRL    LYKRV  DM
Sbjct:  448 VTSMMSHLLHHFVWTPPQGTKPEEIDMSENPGLVTYMRTPVQAVATPRLPS-DLYKRVPYDM 508

HSP 2 Score: 40.4318 bits (93), Expect = 3.621e-22
Identity = 16/19 (84.21%), Postives = 18/19 (94.74%), Query Frame = 3 
Query:    6 LLPFGSGRRICPGIQLGIN 62
            LLPFG+GRR+CPG QLGIN
Sbjct:  428 LLPFGAGRRVCPGAQLGIN 446
[Close]
BLAST of CK932739 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.629e-18
Identity = 33/62 (53.23%), Postives = 45/62 (72.58%), Query Frame = 2 
Query:   65 LTSMLGHLLHHFWWAPAKGVKPEEIDMAGNPGQVTYMTTPLEVVATPRLADHGLYKRVLVDM 250
            + SM+GHLLHHF W+  +G +PE+++M  +PG VT+M TPL+ VA PRL    LY RV V+M
Sbjct:  451 VASMIGHLLHHFEWSLPEGTRPEDVNMMESPGLVTFMGTPLQAVAKPRLEKEELYNRVPVEM 512

HSP 2 Score: 39.2762 bits (90), Expect = 1.629e-18
Identity = 15/19 (78.95%), Postives = 18/19 (94.74%), Query Frame = 3 
Query:    6 LLPFGSGRRICPGIQLGIN 62
            +LPFG+GRR+CPG QLGIN
Sbjct:  431 VLPFGAGRRVCPGAQLGIN 449
The following BLAST results are available for this feature:
BLAST of CK932739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
C98A2_SOYBN2.783e-2269.64Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
C98A3_ARATH3.621e-2266.13Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
C98A1_SORBI1.629e-1853.23Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004530_B09 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0001_IVF_B09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932739 ID=CK932739; Name=CK932739; organism=Citrus sinensis; type=EST; length=372bp
GGGGATTGTTACCATTTGGTTCGGGGAGAAGAATTTGTCCCGGCATACAA
CTTGGCATAAATTTTTGACCTCGATGTTGGGTCATCTTTTGCACCATTTT
TGGTGGGCACCGGCTAAAGGAGTGAAGCCTGAGGAAATTGATATGGCCGG
GAACCCTGGACAGGTCACGTACATGACCACACCCCTTGAGGTTGTGGCTA
CCCCGCGGTTGGCTGATCATGGCCTGTACAAACGTGTCCTTGTGGACATG
TGATTTAATTAAGTTTGTCGTGTGATAAAATATGGTTCCTTGTTTTTTGG
CATTTAATAAACCTGAGCGCCCTTCTTTTCTTCAAAAAAAAAAACAAAAA
AAAAAAAAAAAAAAAAAAAAAA
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