CK932750
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK932750 vs. ExPASy Swiss-Prot
Match: HMGCL_ARATH (Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Arabidopsis thaliana GN=HMGCL PE=1 SV=2) HSP 1 Score: 229.565 bits (584), Expect = 1.540e-59 Identity = 123/202 (60.89%), Postives = 143/202 (70.79%), Query Frame = 1 Query: 196 LRNPNFDFSVSFTIMSSLEEPLGLDKLPSMSTIDRIQRFSSNACRPSGDGMGMGSCWIEGSSCSTPNSYDEDYDEYTREAFPWRRHTRDMSHGDSFSRRTVSLGRNHKMFGSACDI-------YNSNCNDKDIRDITNKFLKGIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLAD 780 L +P+ S FT MSSLEEPL DKLPSMST+DRIQRFSS ACRP D +GMG WIEG C+T NS +D + +E+FPWRRHTR +S G+ R GR + G+ + Y++ N+ I+NK KGIP+FVKIVEVGPRDGLQNEKN VPT VKVELI+RLVSSGLPVVEATSFVSPKWVPQLAD Sbjct: 23 LHHPSIPVSHFFT-MSSLEEPLSFDKLPSMSTMDRIQRFSSGACRPRDD-VGMGHRWIEGRDCTTSNSCIDDDKSFAKESFPWRRHTRKLSEGEHMFRNISFAGRTSTVSGTLRESKSFKEQKYSTFSNENGTSHISNKISKGIPKFVKIVEVGPRDGLQNEKNIVPTSVKVELIQRLVSSGLPVVEATSFVSPKWVPQLAD 222
BLAST of CK932750 vs. ExPASy Swiss-Prot
Match: HMGCL_BOVIN (Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Bos taurus GN=HMGCL PE=2 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.558e-19 Identity = 47/70 (67.14%), Postives = 56/70 (80.00%), Query Frame = 1 Query: 571 IRDITNKFLKGIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLAD 780 +R ++ + P+ VKIVEVGPRDGLQNEKN VPT VK++LI L +GLPVVEATSFVSPKWVPQ+AD Sbjct: 18 LRAVSTSSVGTFPKQVKIVEVGPRDGLQNEKNIVPTPVKIKLIDMLSEAGLPVVEATSFVSPKWVPQMAD 87
BLAST of CK932750 vs. ExPASy Swiss-Prot
Match: HMGCL_RAT (Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Rattus norvegicus GN=Hmgcl PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.010e-18 Identity = 45/70 (64.29%), Postives = 56/70 (80.00%), Query Frame = 1 Query: 571 IRDITNKFLKGIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLAD 780 +R + + +P+ VKIVEVGPRDGLQNEK+ VPT VK++LI L +GLPV+EATSFVSPKWVPQ+AD Sbjct: 18 LRAASTSSMGTLPKRVKIVEVGPRDGLQNEKSIVPTPVKIKLIDMLSEAGLPVIEATSFVSPKWVPQMAD 87
BLAST of CK932750 vs. ExPASy Swiss-Prot
Match: HMGCL_MOUSE (Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Mus musculus GN=Hmgcl PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.722e-18 Identity = 44/70 (62.86%), Postives = 55/70 (78.57%), Query Frame = 1 Query: 571 IRDITNKFLKGIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLAD 780 +R ++ + +P+ VKIVEVGPRDGLQNEK+ VPT VK+ LI L +GLPV+EATSFVSP WVPQ+AD Sbjct: 18 LRAVSTSSMGTLPKQVKIVEVGPRDGLQNEKSIVPTPVKIRLIDMLSEAGLPVIEATSFVSPNWVPQMAD 87
BLAST of CK932750 vs. ExPASy Swiss-Prot
Match: HMGC2_HUMAN (Probable 3-hydroxymethyl-3-methylglutaryl-CoA lyase 2 OS=Homo sapiens GN=HMGCLL1 PE=2 SV=3) HSP 1 Score: 92.8189 bits (229), Expect = 2.249e-18 Identity = 43/62 (69.35%), Postives = 50/62 (80.65%), Query Frame = 1 Query: 595 LKGIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLAD 780 L G+P FVKIVEVGPRDGLQNEK VPT +K+E I RL +GL V+E TSFVS +WVPQ+AD Sbjct: 71 LSGLPEFVKIVEVGPRDGLQNEKVIVPTDIKIEFINRLSQTGLSVIEVTSFVSSRWVPQMAD 132
BLAST of CK932750 vs. ExPASy Swiss-Prot
Match: HMGCL_MACFA (Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Macaca fascicularis GN=HMGCL PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.011e-18 Identity = 44/70 (62.86%), Postives = 55/70 (78.57%), Query Frame = 1 Query: 571 IRDITNKFLKGIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLAD 780 +R ++ + +P+ VKIVEVGPRDGLQNEKN V T VK++LI L +GL V+EATSFVSPKWVPQ+AD Sbjct: 18 LRAVSTSSMDTLPKQVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIEATSFVSPKWVPQMAD 87
BLAST of CK932750 vs. ExPASy Swiss-Prot
Match: HMGC2_MOUSE (Probable 3-hydroxymethyl-3-methylglutaryl-CoA lyase 2 OS=Mus musculus GN=Hmgcll1 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.545e-18 Identity = 42/62 (67.74%), Postives = 51/62 (82.26%), Query Frame = 1 Query: 595 LKGIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLAD 780 L G+P +VKIVEVGPRDGLQNEK VPT +K+ELI +L +GL V+E TSFVS +WVPQ+AD Sbjct: 41 LPGLPEYVKIVEVGPRDGLQNEKVIVPTDIKIELINQLSQTGLSVIEVTSFVSSRWVPQMAD 102
BLAST of CK932750 vs. ExPASy Swiss-Prot
Match: HMGCL_CHICK (Hydroxymethylglutaryl-CoA lyase OS=Gallus gallus GN=HMGCL PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.548e-18 Identity = 42/58 (72.41%), Postives = 50/58 (86.21%), Query Frame = 1 Query: 607 PRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLAD 780 P+ VK+VEVGPRDGLQNEK+ VPT VK+ LI L +GLPV+EATSFVSP+WVPQ+AD Sbjct: 3 PQRVKVVEVGPRDGLQNEKSVVPTPVKIRLIDMLSETGLPVIEATSFVSPRWVPQMAD 60
BLAST of CK932750 vs. ExPASy Swiss-Prot
Match: HMGCL_PONAB (Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Pongo abelii GN=HMGCL PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.541e-17 Identity = 42/70 (60.00%), Postives = 53/70 (75.71%), Query Frame = 1 Query: 571 IRDITNKFLKGIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLAD 780 +R ++ + +P+ VKIVEVGPRDGLQNEKN V T VK++LI L +GL V+E TSFVSPKWVPQ+ D Sbjct: 18 LRAVSTSSMGTLPKRVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGD 87
BLAST of CK932750 vs. ExPASy Swiss-Prot
Match: HMGCL_HUMAN (Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Homo sapiens GN=HMGCL PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 5.541e-17 Identity = 42/70 (60.00%), Postives = 53/70 (75.71%), Query Frame = 1 Query: 571 IRDITNKFLKGIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLAD 780 +R ++ + +P+ VKIVEVGPRDGLQNEKN V T VK++LI L +GL V+E TSFVSPKWVPQ+ D Sbjct: 18 LRAVSTSSMGTLPKRVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGD 87 The following BLAST results are available for this feature:
BLAST of CK932750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932750 ID=CK932750; Name=CK932750; organism=Citrus sinensis; type=EST; length=781bpback to top |