CK932753

Overview
NameCK932753
Unique NameCK932753
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length774
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932753 vs. ExPASy Swiss-Prot
Match: CYPR4_CYNCA (Protein CYPRO4 OS=Cynara cardunculus GN=CYPRO4 PE=2 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.494e-91
Identity = 163/206 (79.13%), Postives = 179/206 (86.89%), Query Frame = 2
Query:    8 FASTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILGTTDTYLILICTLXXXXXXXXXXXXXXRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFSVIWDFQQVKNSAHECYRNQQGLKSCYCYKIVLKDESIVESRFMHDKF-AVTDSPEAPLVVATPMKVSSISLS 622
            FA+TGDGSIVVGSLDGKIRLYS TSMR AKTAFPGLGSPITHVDVTYDGKWILGTTDTYLILIC+L              RMGNKIPAPRLLKLTP+DSH AG +NK HGG FSWVTE+GKQERHLVATVGKFSVIWDFQ+VKNS HECYRNQ+GLKSCYCYK++ KDESI+ES FM+DK+ AV DSPEAPLV+ATP K++S S+S
Sbjct:  287 FATTGDGSIVVGSLDGKIRLYSTTSMRMAKTAFPGLGSPITHVDVTYDGKWILGTTDTYLILICSLFTDKDGKTKTGFSGRMGNKIPAPRLLKLTPVDSHTAGVNNKFHGGRFSWVTESGKQERHLVATVGKFSVIWDFQRVKNSGHECYRNQEGLKSCYCYKLMTKDESIIESLFMNDKYAAVGDSPEAPLVMATPKKITSFSMS 492          
BLAST of CK932753 vs. ExPASy Swiss-Prot
Match: VID27_DICDI (VID27-like protein OS=Dictyostelium discoideum GN=DDB_G0274813 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.977e-15
Identity = 51/171 (29.82%), Postives = 81/171 (47.37%), Query Frame = 2
Query:    5 CFASTGDGSIVVGSLDGKIRLYSKTSMRQAK----------------TAFPGLGSPITHVDVTYDGKWILGTTDTYLILICTLXXXXXXXXXXXXXXRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFSVIWDFQQVKNSAHECYRNQQ 469
            C A+TG G I  G+  G+I+L+SKT   Q K                T  PG+G PI  +DVT DGKWI+ T   Y+++I                 R+G + P+P+ L L P D    G         F+ V +  + E  ++ + G F + W+F+++K +  + Y+ +Q
Sbjct:  741 CAATTGSGQIAFGTSKGEIKLFSKTQFDQNKRSVTSSDPLGAIARSRTTLPGIGDPIVGIDVTKDGKWIVATCKQYIMVI----PASLKDGSSGFEDRLGARRPSPKRLILKPQDIKRMGGVVNFTPAKFNIVGDE-QSETSILTSTGSFLITWNFRKIKQNILDVYQIKQ 906          
BLAST of CK932753 vs. ExPASy Swiss-Prot
Match: VID27_SCHPO (Vacuolar import and degradation protein 27 OS=Schizosaccharomyces pombe GN=vid27 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.171e-11
Identity = 49/155 (31.61%), Postives = 76/155 (49.03%), Query Frame = 2
Query:   11 ASTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILGTTDTYLILICTLXXXXXXXXXXXXXXRMG-NKIPAPRLLKLTPLDSHLAGTDNKIHGG----HFSWVTENGKQERHLVATVGKFSVIWDFQQVKNSAHECYR 460
            A+T +G I V S  G IRL+ +  +  AKTA P LG  I  VDVT  G ++L T  TY++LI T                   +K P P+ L+L+P   H+A    ++ GG       + T    +E  +V+++G F + W+  +VK    + Y+
Sbjct:  587 ATTENGYIAVASNKGDIRLFDRIGVN-AKTALPALGEAIIGVDVTASGDFVLATCKTYILLIDTRIKEGRYAGRLGFERNFAKDKKPKPKRLQLSP--QHIAMMQRELKGGASFTPAKFNTGIDAKETTIVSSIGPFLISWNLDRVKRGFTDSYK 738          
The following BLAST results are available for this feature:
BLAST of CK932753 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
CYPR4_CYNCA1.494e-9179.13Protein CYPRO4 OS=Cynara cardunculus GN=CYPRO4 PE=... [more]
VID27_DICDI2.977e-1529.82VID27-like protein OS=Dictyostelium discoideum GN=... [more]
VID27_SCHPO1.171e-1131.61Vacuolar import and degradation protein 27 OS=Schi... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004530_B03 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0001_IVF_B03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932753 ID=CK932753; Name=CK932753; organism=Citrus sinensis; type=EST; length=774bp
GGGGTGCTTTGCATCTACTGGGGATGGATCAATTGTTGTTGGGTCGCTTG
ATGGGAAGATAAGGTTATATTCAAAGACATCAATGAGGCAGGCTAAAACG
GCTTTTCCGGGGCTTGGTTCACCCATTACCCATGTGGATGTTACATATGA
TGGGAAATGGATATTGGGTACTACAGATACATATTTGATACTCATTTGTA
CCCTGTTCACTGATAAAGATGGGAAGACAAAGACGGGTTTTGGTGGGCGC
ATGGGAAACAAGATCCCAGCTCCAAGATTGTTGAAGTTGACTCCTCTGGA
TTCACACTTGGCTGGGACGGATAATAAGATTCATGGTGGCCATTTCTCAT
GGGTAACGGAGAATGGTAAACAAGAGCGCCACTTAGTTGCAACGGTTGGC
AAGTTCAGTGTGATATGGGACTTCCAGCAGGTGAAGAACAGTGCTCATGA
ATGCTACCGGAATCAGCAAGGTCTCAAGAGCTGCTACTGTTATAAGATCG
TGTTGAAGGATGAATCTATTGTAGAAAGTCGTTTCATGCATGACAAGTTT
GCTGTGACTGACTCCCCTGAAGCTCCGCTGGTGGTGGCGACACCCATGAA
AGTCAGCTCTATCAGTCTCTCTGGCAGGCGATGACTTCATCAAACCATCT
TTGTTTCTATCTTGGCATCCATGTTGGTGTCTAGTAGGAATGCTTCTGCC
GTTACATCTAAACCTTTTTCTAACCTGTAATCAAGTTTGTTATCCTTTTT
TCTGAGGGAAAAAAAAAAAAAAAA
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