CK932762
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK932762 vs. ExPASy Swiss-Prot
Match: TMED2_MOUSE (Transmembrane emp24 domain-containing protein 2 OS=Mus musculus GN=Tmed2 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.219e-14 Identity = 53/197 (26.90%), Postives = 98/197 (49.75%), Query Frame = 1 Query: 46 IAAILAFIFSPQAVYGIRFVIDREECFSHNVQYEGDTVHASFVVIKADSSWYSSHDGVDLVVKGPASDQIHDFRDKISEKFEFVAHHKGVHRFCFTNK--SPYHEIIDFDVHVGHFSYYDEHAKDEHFNPLLEQISKLEEALYNIQFEQHWLEAQTERQAIVNEAMSRRAVYKAFWESTALVGASVLQVYLLRRLFE 630 + A+LA + + + Y + EECF V G + F V A+ + +D+ + GP + I+ + S K+ F AH G ++FCF+N+ + +I+ F + +G + + H N L E I++L A+ ++ EQ ++E + +N+ + R V +F+E+ LV ++ Q+Y L+R FE Sbjct: 7 LLALLAALLATASGYFVSIDAHAEECFFERVT-SGTKMGLIFEV--AEGGFLD----IDVEITGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAPKGQDMETEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIYYLKRFFE 196
BLAST of CK932762 vs. ExPASy Swiss-Prot
Match: TMED_NEMVE (Transmembrane emp24 domain-containing protein OS=Nematostella vectensis GN=v1g194562 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.899e-14 Identity = 53/194 (27.32%), Postives = 93/194 (47.94%), Query Frame = 1 Query: 55 ILAFIFSPQAVYGIRFVIDREECFSHNVQYEGDTVHASFVVIKADSSWYSSHDGVDLVVKGPASDQIHDFRDKISEKFEFVAHHKGVHRFCFTNK--SPYHEIIDFDVHVGHFSYYDEHAKDEHFNPLLEQISKLEEALYNIQFEQHWLEAQTERQAIVNEAMSRRAVYKAFWESTALVGASVLQVYLLRRLFE 630 +L F+ Y I EECF H+ G + F V A+ + +D+ + GP I+ + S K+ F AH G + +CF+NK + +++ F + +G + + L E +S+L EA+ ++ EQ ++E + +N+ + R V+ +F+ES LV ++ QVY L+R FE Sbjct: 12 VLMFLARSSLCYFITIDAHGEECF-HDKVTSGTKMGLIFEV--AEGGFLD----IDVKIIGPDQKVIYSGERETSGKYTFAAHMDGTYNYCFSNKMSTMTPKVLKFSMDIGEAPKDTSKEDNAGHDKLSEMVSQLSEAMTGVKHEQEYMEVRERIHRSINDNTNSRVVWWSFFESLVLVAMTLGQVYYLKRFFE 198
BLAST of CK932762 vs. ExPASy Swiss-Prot
Match: TMED2_CRIGR (Transmembrane emp24 domain-containing protein 2 (Fragment) OS=Cricetulus griseus GN=TMED2 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.944e-14 Identity = 52/197 (26.40%), Postives = 97/197 (49.24%), Query Frame = 1 Query: 46 IAAILAFIFSPQAVYGIRFVIDREECFSHNVQYEGDTVHASFVVIKADSSWYSSHDGVDLVVKGPASDQIHDFRDKISEKFEFVAHHKGVHRFCFTNK--SPYHEIIDFDVHVGHFSYYDEHAKDEHFNPLLEQISKLEEALYNIQFEQHWLEAQTERQAIVNEAMSRRAVYKAFWESTALVGASVLQVYLLRRLFE 630 + +LA + + + Y + EECF V G + F V A+ + +D+ + GP + I+ + S K+ F AH G ++FCF+N+ + +I+ F + +G + + H N L E I++L A+ ++ EQ ++E + +N+ + R V +F+E+ LV ++ Q+Y L+R FE Sbjct: 2 VLVLLAALLATASGYFVSIDAHAEECFFERVT-SGTKMGLIFEV--AEGGFLD----IDVEITGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAPKGQDMETEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIYYLKRFFE 191
BLAST of CK932762 vs. ExPASy Swiss-Prot
Match: TMED2_RAT (Transmembrane emp24 domain-containing protein 2 OS=Rattus norvegicus GN=Tmed2 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.457e-14 Identity = 52/197 (26.40%), Postives = 97/197 (49.24%), Query Frame = 1 Query: 46 IAAILAFIFSPQAVYGIRFVIDREECFSHNVQYEGDTVHASFVVIKADSSWYSSHDGVDLVVKGPASDQIHDFRDKISEKFEFVAHHKGVHRFCFTNK--SPYHEIIDFDVHVGHFSYYDEHAKDEHFNPLLEQISKLEEALYNIQFEQHWLEAQTERQAIVNEAMSRRAVYKAFWESTALVGASVLQVYLLRRLFE 630 + +LA + + + Y + EECF V G + F V A+ + +D+ + GP + I+ + S K+ F AH G ++FCF+N+ + +I+ F + +G + + H N L E I++L A+ ++ EQ ++E + +N+ + R V +F+E+ LV ++ Q+Y L+R FE Sbjct: 7 LLVLLAALLATASGYFVSIDAHAEECFFERVT-SGTKMGLIFEV--AEGGFLD----IDVEITGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAPKGQDMETEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIYYLKRFFE 196
BLAST of CK932762 vs. ExPASy Swiss-Prot
Match: TMED2_HUMAN (Transmembrane emp24 domain-containing protein 2 OS=Homo sapiens GN=TMED2 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.434e-14 Identity = 52/197 (26.40%), Postives = 97/197 (49.24%), Query Frame = 1 Query: 46 IAAILAFIFSPQAVYGIRFVIDREECFSHNVQYEGDTVHASFVVIKADSSWYSSHDGVDLVVKGPASDQIHDFRDKISEKFEFVAHHKGVHRFCFTNK--SPYHEIIDFDVHVGHFSYYDEHAKDEHFNPLLEQISKLEEALYNIQFEQHWLEAQTERQAIVNEAMSRRAVYKAFWESTALVGASVLQVYLLRRLFE 630 + +LA + + + Y + EECF V G + F V A+ + +D+ + GP + I+ + S K+ F AH G ++FCF+N+ + +I+ F + +G + + H N L E I++L A+ ++ EQ ++E + +N+ + R V +F+E+ LV ++ Q+Y L+R FE Sbjct: 7 LLVLLAALLATVSGYFVSIDAHAEECFFERVT-SGTKMGLIFEV--AEGGFLD----IDVEITGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAPKGQDMETEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIYYLKRFFE 196
BLAST of CK932762 vs. ExPASy Swiss-Prot
Match: SEL9_CAEEL (Suppressor/enhancer of lin-12 protein 9 OS=Caenorhabditis elegans GN=sel-9 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.543e-12 Identity = 57/199 (28.64%), Postives = 96/199 (48.24%), Query Frame = 1 Query: 55 ILAFIF-SPQAVYGIRFVIDREECFSHNVQYEGDTVHASFVVIKADSSWYSSHDGVDLVVKGPASDQIHDFRDKISEKFEFVAHHKGVHRFCFTNK----SPYHEIIDFDVHVGHFSYYDEHAKDEHFN--PLLEQISKLEEALYNIQFEQHWLEAQTERQAIVNEAMSRRAVYKAFWESTALVGASVLQVYLLRRLFE 630 ILA +F +P A Y I + E+CF + G + F V A+ + +D+ + GP + +I+ + S KF F AH GV+ +CF NK +P + ++ H A + + L E + +L AL +++ EQ ++E + +NE + R V A +E+ LVG +V Q++ L+R FE Sbjct: 7 ILAVLFVTPAASYFIHVDANEEQCFFDRLT-SGTKMGLMFEV--AEGGFLD----IDVKITGPDNKEIYKGERESSGKFTFAAHMDGVYTYCFGNKMSTMTPKAVMFTVEITEPHQQAPGAAANQDAADNAKLEEMVRELSSALMSVKHEQEYMEVRERVHRNINENTNSRVVMWAAFEAFVLVGMTVGQIFYLKRFFE 198 The following BLAST results are available for this feature:
BLAST of CK932762 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK932762 ID=CK932762; Name=CK932762; organism=Citrus sinensis; type=EST; length=842bpback to top |