CK932767
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932767 vs. ExPASy Swiss-Prot
Match: MSIR6_DROME (RNA-binding protein Musashi homolog Rbp6 OS=Drosophila melanogaster GN=Rbp6 PE=1 SV=3) HSP 1 Score: 141.354 bits (355), Expect = 3.659e-33 Identity = 72/170 (42.35%), Postives = 108/170 (63.53%), Query Frame = 1 Query: 115 PGKIFIGGLARETSSAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGEVQEHQIMRDHSTSRSRGFGFITFDTEQAVXXXXXXXXXXXXAGAQVXXKKAEPK 621 PGK+FIGGL+ +TS +FG+YG+I+++++MKD T + RGFGFVT++DP+ VDKV+ + TH ++GK+V+ K P+ A +TKKIFVGG+ + ++ K +F QFG +++ +M D T+R RGFGF+TF +E V V KKA+PK Sbjct: 28 PGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEIN-NKMVECKKAQPK 196
BLAST of CK932767 vs. ExPASy Swiss-Prot
Match: HRP1_YEAST (Nuclear polyadenylated RNA-binding protein 4 OS=Saccharomyces cerevisiae GN=HRP1 PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.372e-32 Identity = 72/167 (43.11%), Postives = 105/167 (62.87%), Query Frame = 1 Query: 121 KIFIGGLARETSSAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGEVQEHQIMRDHSTSRSRGFGFITFDTEQAVXXXXXXXXXXXXAGAQVXXKKAEPK 621 K+FIGGL +T+ ++FGKYG +TD IMKD TG+ RGFGF+++ PS VD+V++ HI++GK ++ KR IP+ + KT KIFVGGI V EF++FF Q+G + + Q+M D T +SRGFGF+T+D+ AV ++ K+AEP+ Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKTQHILDGKVIDPKRAIPR----DEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAV-DRVCQNKFIDFKDRKIEIKRAEPR 321 HSP 2 Score: 69.707 bits (169), Expect = 1.353e-11 Identity = 33/79 (41.77%), Postives = 50/79 (63.29%), Query Frame = 1 Query: 118 GKIFIGGLARETSSAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDKVIEDTHI-INGKQVEIKRTIPK 351 GKIF+GG+ + +F + F ++G I D+ +M D+ TGQ RGFGFVTY VD+V ++ I +++EIKR P+ Sbjct: 243 GKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAEPR 321
BLAST of CK932767 vs. ExPASy Swiss-Prot
Match: YHKF_SCHPO (Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe GN=SPBC660.15 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 6.900e-32 Identity = 70/182 (38.46%), Postives = 106/182 (58.24%), Query Frame = 1 Query: 76 DDRSQPHTGDGASPGKIFIGGLARETSSAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGEVQEHQIMRDHSTSRSRGFGFITFDTEQAVXXXXXXXXXXXXAGAQVXXKKAEPK 621 +D ++ + GK+FIGGL ET+ +F ++GE+ D +M+D TG+ RGFGF+T+ +P V++V+ H ++GK ++ KR IP+ + KT K+FVGG+P E+EF++FF QFG V + +M D T R RGFGF+T++ E AV G V K+A PK Sbjct: 149 EDNAEETSPFNREDGKMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEVMSKEHHLDGKIIDPKRAIPR----EEQEKTAKMFVGGVPGDCTEEEFRNFFNQFGRVLDATLMMDKDTGRPRGFGFVTYENESAVEATMSQPYITIH-GKPVEVKRATPK 325 HSP 2 Score: 76.2554 bits (186), Expect = 1.446e-13 Identity = 37/107 (34.58%), Postives = 61/107 (57.01%), Query Frame = 1 Query: 55 SSDHHPEDDRSQPHTG----DGASPGKIFIGGLARETSSAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDKVIEDTHI-INGKQVEIKRTIPKGAV 360 S +HH + P + K+F+GG+ + + +F F ++G + D+ +M D+ TG+PRGFGFVTY + S V+ + +I I+GK VE+KR PK ++ Sbjct: 222 SKEHHLDGKIIDPKRAIPREEQEKTAKMFVGGVPGDCTEEEFRNFFNQFGRVLDATLMMDKDTGRPRGFGFVTYENESAVEATMSQPYITIHGKPVEVKRATPKASL 328
BLAST of CK932767 vs. ExPASy Swiss-Prot
Match: MSI2H_MOUSE (RNA-binding protein Musashi homolog 2 OS=Mus musculus GN=Msi2 PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 5.842e-31 Identity = 70/170 (41.18%), Postives = 105/170 (61.76%), Query Frame = 1 Query: 115 PGKIFIGGLARETSSAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGEVQEHQIMRDHSTSRSRGFGFITFDTEQAVXXXXXXXXXXXXAGAQVXXKKAEPK 621 PGK+FIGGL+ +TS +F K+GEI + ++M+D T + RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKIFVGG+ ++ ++ K +F QFG+V++ +M D +T+R RGFGF+TF+ E V V KKA+PK Sbjct: 20 PGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEIN-NKMVECKKAQPK 188
BLAST of CK932767 vs. ExPASy Swiss-Prot
Match: MSI2H_HUMAN (RNA-binding protein Musashi homolog 2 OS=Homo sapiens GN=MSI2 PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 5.842e-31 Identity = 70/170 (41.18%), Postives = 105/170 (61.76%), Query Frame = 1 Query: 115 PGKIFIGGLARETSSAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGEVQEHQIMRDHSTSRSRGFGFITFDTEQAVXXXXXXXXXXXXAGAQVXXKKAEPK 621 PGK+FIGGL+ +TS +F K+GEI + ++M+D T + RGFGFVT+ADP+ VDKV+ + H ++ K ++ K P+ A +TKKIFVGG+ ++ ++ K +F QFG+V++ +M D +T+R RGFGF+TF+ E V V KKA+PK Sbjct: 20 PGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEIN-NKMVECKKAQPK 188
BLAST of CK932767 vs. ExPASy Swiss-Prot
Match: RB27C_DROME (Heterogeneous nuclear ribonucleoprotein 27C OS=Drosophila melanogaster GN=Hrb27C PE=1 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 6.459e-30 Identity = 66/169 (39.05%), Postives = 107/169 (63.31%), Query Frame = 1 Query: 118 GKIFIGGLARETSSAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGEVQEHQIMRDHSTSRSRGFGFITFDTEQAVXXXXXXXXXXXXAGAQVXXKKAEPK 621 GK+F+GGL+ ET+ ++F ++G+I D V+MK+ ++G+ RGFGFVT+ADP+ V+ V+++ H ++G+ ++ K P+ K K+F+GG+PS+V E + + FF ++G+V E IM D +SRGFGF++F+ E +V G QV KKAEP+ Sbjct: 7 GKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLN-GKQVEIKKAEPR 174 HSP 2 Score: 68.9366 bits (167), Expect = 2.308e-11 Identity = 35/96 (36.46%), Postives = 58/96 (60.42%), Query Frame = 1 Query: 88 QPHTGDGASPGKIFIGGLARETSSAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDKVIEDTHI-INGKQVEIKRTIPKGAVGSKD 372 +P G G K+F+GGL + F +YG++T+ VIM D++ + RGFGF+++ + S V+ V + +I +NGKQVEIK+ P+ G ++ Sbjct: 89 KPKKGGGY---KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRDGSGGQN 181
BLAST of CK932767 vs. ExPASy Swiss-Prot
Match: MSI1H_HUMAN (RNA-binding protein Musashi homolog 1 OS=Homo sapiens GN=MSI1 PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.218e-28 Identity = 70/187 (37.43%), Postives = 108/187 (57.75%), Query Frame = 1 Query: 73 EDDRSQPHTGDGASPG---KIFIGGLARETSSAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGEVQEHQIMRDHSTSRSRGFGFITFDTEQAVXXXXXXXXXXXXAGAQVXXKKAEPK 621 E D QP SP K+FIGGL+ +T+ ++FG++GE+ + ++M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKIFVGG+ + ++ K +F QFG+V + +M D +T+R RGFGF+TF++E V V KKA+PK Sbjct: 2 ETDAPQPGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEIN-NKMVECKKAQPK 187
BLAST of CK932767 vs. ExPASy Swiss-Prot
Match: MSI1H_RAT (RNA-binding protein Musashi homolog 1 OS=Rattus norvegicus GN=Msi1 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.591e-28 Identity = 70/187 (37.43%), Postives = 108/187 (57.75%), Query Frame = 1 Query: 73 EDDRSQPHTGDGASPG---KIFIGGLARETSSAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGEVQEHQIMRDHSTSRSRGFGFITFDTEQAVXXXXXXXXXXXXAGAQVXXKKAEPK 621 E D QP SP K+FIGGL+ +T+ ++FG++GE+ + ++M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKIFVGG+ + ++ K +F QFG+V + +M D +T+R RGFGF+TF++E V V KKA+PK Sbjct: 2 ETDAPQPGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEIN-NKMVECKKAQPK 187
BLAST of CK932767 vs. ExPASy Swiss-Prot
Match: MSI1H_MOUSE (RNA-binding protein Musashi homolog 1 OS=Mus musculus GN=Msi1 PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.591e-28 Identity = 70/187 (37.43%), Postives = 108/187 (57.75%), Query Frame = 1 Query: 73 EDDRSQPHTGDGASPG---KIFIGGLARETSSAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGAVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGEVQEHQIMRDHSTSRSRGFGFITFDTEQAVXXXXXXXXXXXXAGAQVXXKKAEPK 621 E D QP SP K+FIGGL+ +T+ ++FG++GE+ + ++M+D T + RGFGFVT+ D + VDKV+ + H ++ K ++ K P+ A +TKKIFVGG+ + ++ K +F QFG+V + +M D +T+R RGFGF+TF++E V V KKA+PK Sbjct: 2 ETDAPQPGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEIN-NKMVECKKAQPK 187
BLAST of CK932767 vs. ExPASy Swiss-Prot
Match: DAZP1_HUMAN (DAZ-associated protein 1 OS=Homo sapiens GN=DAZAP1 PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 4.629e-28 Identity = 70/183 (38.25%), Postives = 100/183 (54.64%), Query Frame = 1 Query: 118 GKIFIGGLARETSSAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKG--------------AVGSKDFKTKKIFVGGIPSSVNEDEFKDFFMQFGEVQEHQIMRDHSTSRSRGFGFITFDTEQAVXXXXXXXXXXXXAGAQVXXKKAEPK 621 GK+F+GGL T+ +F +YGE+ D VIMKD+ T Q RGFGFV + DP+ V V+ H ++G+ ++ K P+G S + K+ KIFVGGIP + E E +++F +FG V E ++ D R RGFGFITF+ EQ+V G +V K+AEP+ Sbjct: 10 GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSV-DQAVNMHFHDIMGKKVEVKRAEPR 191 HSP 2 Score: 69.3218 bits (168), Expect = 1.767e-11 Identity = 34/101 (33.66%), Postives = 58/101 (57.43%), Query Frame = 1 Query: 73 EDDRSQPHTG-------DGASPGKIFIGGLARETSSAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPK 351 + +R++P G D + KIF+GG+ + ++F K+G +T+ V++ D + +PRGFGF+T+ D VD+ + H I GK+VE+KR P+ Sbjct: 91 QPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 191 The following BLAST results are available for this feature:
BLAST of CK932767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 105
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932767 ID=CK932767; Name=CK932767; organism=Citrus sinensis; type=EST; length=623bpback to top |