CK932774

Overview
NameCK932774
Unique NameCK932774
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length169
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12457 contig Csv1_Contig12457:221..389. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK932774 vs. ExPASy Swiss-Prot
Match: CLPR2_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic OS=Arabidopsis thaliana GN=CLPR2 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.242e-14
Identity = 37/56 (66.07%), Postives = 42/56 (75.00%), Query Frame = 2 
Query:    2 KSLYSGIRNDKPIRGRIAMMPIGTPKVLYXXPGEGSWQWVDLWNALYQERVIFIGQ 169
            KSL SG    K  R R+ MMPIGTP+V Y    EG+WQWVD+WNALY+ERVIFIGQ
Sbjct:   51 KSLQSG--TGKASRSRVKMMPIGTPRVPYRNREEGTWQWVDIWNALYRERVIFIGQ 104
The following BLAST results are available for this feature:
BLAST of CK932774 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CLPR2_ARATH3.242e-1466.07ATP-dependent Clp protease proteolytic subunit-rel... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004529_H06 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0001_IIF_H06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932774 ID=CK932774; Name=CK932774; organism=Citrus sinensis; type=EST; length=169bp
TAAGAGCCTCTACTCCGGCATTCGTAATGATAAACCAATAAGGGGACGAA
TTGCAATGATGCCGATTGGGACACCAAAAGTGCTTTATAGNNNNCCTGGT
GAGGGATCTTGGCAATGGGTTGATCTATGGAATGCCCTATATCAAGAACG
TGTTATTTTCATTGGGCAA
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