CK932786
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932786 vs. ExPASy Swiss-Prot
Match: CHMP5_DICDI (Charged multivesicular body protein 5 OS=Dictyostelium discoideum GN=chmp5 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.810e-27 Identity = 66/161 (40.99%), Postives = 99/161 (61.49%), Query Frame = 1 Query: 1 QKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMTALKSANKELKGMMKTVKIQDIDNLQDEMMDLMDVSHEIQETLGRSYNVPDDIDEDELMGELDALEADMGMEDEAGVPSYLQPDKEPDLDAELNLPTAPSGHASAQHDRPQAEDELGLPSVPQAS 483 QK+MYE QRD + + +FN++Q FA+E ++D T++A+K K++K +K +KI+D+D++QDEM DL+D ++EIQE+LGR+Y PD +DE EL EL ++ + +E EA +PSYL P D H S + DE GLP +AS Sbjct: 70 QKKMYERQRDQMASTSFNMEQTKFATESMRDTITTVSAMKQGAKDMKTQLKHIKIEDVDDMQDEMQDLLDYNNEIQESLGRAYQTPDTLDESELEAELMSMGEE--LELEASMPSYLMTPSVPTTDP----------HQS-------SVDEYGLPIGQEAS 211
BLAST of CK932786 vs. ExPASy Swiss-Prot
Match: CHMP5_XENTR (Charged multivesicular body protein 5 OS=Xenopus tropicalis GN=chmp5 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.658e-25 Identity = 66/159 (41.51%), Postives = 96/159 (60.38%), Query Frame = 1 Query: 1 QKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMTALKSANKELKGMMKTVKIQDIDNLQDEMMDLMDVSHEIQETLGRSYNVPDDIDEDELMGELDALEADMGMEDEAGVPSYLQPDKEPDLDAELNLPTAPSGHASAQHDRPQA-EDELGLPSVP 474 QKRMYE QRD L Q+FN++Q +A + +KD + T+ A+K KE+K K VKI I++LQD++ D+M+ ++EIQE L RSY P +IDED+L ELDAL ++ ++D+ SY LD + P P G + ++ DE GLP +P Sbjct: 71 QKRMYEQQRDNLNQQSFNMEQTNYAIQSLKDTKTTVDAMKVGAKEMKKAYKQVKIDQIEDLQDQLEDMMENANEIQEALSRSYGTP-EIDEDDLEAELDALGDELLLDDDT---SY--------LDEAASAPAIPEGVPNDSKNKDGVLVDEFGLPQIP 217
BLAST of CK932786 vs. ExPASy Swiss-Prot
Match: CHMP5_DANRE (Charged multivesicular body protein 5 OS=Danio rerio GN=chmp5 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.658e-25 Identity = 68/163 (41.72%), Postives = 96/163 (58.90%), Query Frame = 1 Query: 1 QKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMTALKSANKELKGMMKTVKIQDIDNLQDEMMDLMDVSHEIQETLGRSYNVPDDIDEDELMGELDALEADMGMEDEAGVPSYLQPDKEPDLDAELNLPTAPSGHASAQHDRPQAE-----DELGLPSVP 474 QKRMYEGQRD L Q+FN++Q + + +KD + T+ A+K KE+K K VKI I++LQD++ D+M+ ++E+QE L RSY P +IDED+L ELDAL ++ ++D+ SY LD + P P G A DR DE GLP +P Sbjct: 71 QKRMYEGQRDQLMQQSFNMEQANYTIQTLKDTKTTVEAMKIGAKEMKKAYKNVKIDQIEDLQDQLEDMMEDANEVQEALSRSYGTP-EIDEDDLEAELDALGDELLLDDD---NSY--------LDEASSAPAIPEG---APGDRTTNRDGVLVDEFGLPQIP 218
BLAST of CK932786 vs. ExPASy Swiss-Prot
Match: CHMP5_XENLA (Charged multivesicular body protein 5 OS=Xenopus laevis GN=chmp5 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.312e-24 Identity = 65/159 (40.88%), Postives = 95/159 (59.75%), Query Frame = 1 Query: 1 QKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMTALKSANKELKGMMKTVKIQDIDNLQDEMMDLMDVSHEIQETLGRSYNVPDDIDEDELMGELDALEADMGMEDEAGVPSYLQPDKEPDLDAELNLPTAPSGHASAQHDRPQA-EDELGLPSVP 474 QKRMYE QRD L Q+FN++Q + + +KD + T+ A+K KE+K K VKI I++LQD++ D+M+ ++EIQE L RSY P +IDED+L ELDAL ++ ++D+ SY LD + P P G + ++ DE GLP +P Sbjct: 71 QKRMYEQQRDNLNQQSFNMEQANYTIQTLKDTKTTVDAMKVGAKEMKKAYKQVKIDQIEDLQDQLEDMMENANEIQEALSRSYGTP-EIDEDDLEAELDALGDELLLDDDT---SY--------LDEAASAPAIPEGVPNDSKNKDGVLVDEFGLPQIP 217
BLAST of CK932786 vs. ExPASy Swiss-Prot
Match: CHMP5_RAT (Charged multivesicular body protein 5 OS=Rattus norvegicus GN=Chmp5 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.943e-24 Identity = 64/159 (40.25%), Postives = 96/159 (60.38%), Query Frame = 1 Query: 1 QKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMTALKSANKELKGMMKTVKIQDIDNLQDEMMDLMDVSHEIQETLGRSYNVPDDIDEDELMGELDALEADMGMEDEAGVPSYLQPDKEPDLDAELNLPTAPSGHASAQHDRPQA-EDELGLPSVP 474 QKRMYE QRD L Q+FN++Q + + +KD + T+ A+K KE+K K VKI I++LQD++ D+M+ ++EIQE LGRSY P ++DED+L ELDAL ++ ++++ SY LD + P P G + ++ DE GLP +P Sbjct: 71 QKRMYEQQRDNLAQQSFNMEQANYTIQSLKDTKTTVDAMKLGVKEMKKAYKEVKIDQIEDLQDQLEDMMEDANEIQEALGRSYGTP-ELDEDDLEAELDALGDELLADEDS---SY--------LDEAASAPAIPEGVPTDTKNKDGVLVDEFGLPQIP 217
BLAST of CK932786 vs. ExPASy Swiss-Prot
Match: CHMP5_MOUSE (Charged multivesicular body protein 5 OS=Mus musculus GN=Chmp5 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.943e-24 Identity = 64/159 (40.25%), Postives = 96/159 (60.38%), Query Frame = 1 Query: 1 QKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMTALKSANKELKGMMKTVKIQDIDNLQDEMMDLMDVSHEIQETLGRSYNVPDDIDEDELMGELDALEADMGMEDEAGVPSYLQPDKEPDLDAELNLPTAPSGHASAQHDRPQA-EDELGLPSVP 474 QKRMYE QRD L Q+FN++Q + + +KD + T+ A+K KE+K K VKI I++LQD++ D+M+ ++EIQE LGRSY P ++DED+L ELDAL ++ ++++ SY LD + P P G + ++ DE GLP +P Sbjct: 71 QKRMYEQQRDNLAQQSFNMEQANYTIQSLKDTKTTVDAMKLGVKEMKKAYKEVKIDQIEDLQDQLEDMMEDANEIQEALGRSYGTP-ELDEDDLEAELDALGDELLADEDS---SY--------LDEAASAPAIPEGVPTDTKNKDGVLVDEFGLPQIP 217
BLAST of CK932786 vs. ExPASy Swiss-Prot
Match: CHMP5_DROME (Charged multivesicular body protein 5 OS=Drosophila melanogaster GN=CG6259 PE=1 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 5.150e-24 Identity = 60/162 (37.04%), Postives = 95/162 (58.64%), Query Frame = 1 Query: 1 QKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMTALKSANKELKGMMKTVKIQDIDNLQDEMMDLMDVSHEIQETLGRSYNVPDDIDEDELMGELDALEADMGMEDEAGVPSYLQPDKEPDLDAELNLPTAPSGHASAQHDRPQAE----DELGLPSVP 474 QK+ YE Q + L NQ+FN++Q +A++ +KD Q T+ A+K K++K K + I I+++QD+M D+ + + E+QE LGR+Y +P ++D+D+L ELDAL ++ ++D+ SY LD + P APS A P DE GLP +P Sbjct: 71 QKKAYEQQAESLRNQSFNMEQANYAAQSLKDTQATVAAMKDGVKQMKTEYKKINIDQIEDIQDDMADMFEQADEVQEALGRTYGMP-EVDDDDLQAELDALGDEIALDDDT---SY--------LDDVVKAPEAPSREPGADSIVPGKSTIETDEFGLPKIP 220
BLAST of CK932786 vs. ExPASy Swiss-Prot
Match: CHMP5_PONAB (Charged multivesicular body protein 5 OS=Pongo abelii GN=CHMP5 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.957e-23 Identity = 63/159 (39.62%), Postives = 95/159 (59.75%), Query Frame = 1 Query: 1 QKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMTALKSANKELKGMMKTVKIQDIDNLQDEMMDLMDVSHEIQETLGRSYNVPDDIDEDELMGELDALEADMGMEDEAGVPSYLQPDKEPDLDAELNLPTAPSGHASAQHDRPQA-EDELGLPSVP 474 QKRMYE QRD L Q+FN++Q + + +KD + T+ A+K KE+K K VKI I++LQD++ D+M+ ++EIQE L RSY P ++DED+L ELDAL ++ ++++ SY LD + P P G + ++ DE GLP +P Sbjct: 71 QKRMYEQQRDNLAQQSFNMEQANYTIQSLKDTKTTVDAMKLGVKEMKKAYKQVKIDQIEDLQDQLEDMMEDANEIQEALSRSYGTP-ELDEDDLEAELDALGDELLADEDS---SY--------LDEAASAPAIPEGVPTDTKNKDGVLVDEFGLPQIP 217
BLAST of CK932786 vs. ExPASy Swiss-Prot
Match: CHMP5_HUMAN (Charged multivesicular body protein 5 OS=Homo sapiens GN=CHMP5 PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.957e-23 Identity = 63/159 (39.62%), Postives = 95/159 (59.75%), Query Frame = 1 Query: 1 QKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMTALKSANKELKGMMKTVKIQDIDNLQDEMMDLMDVSHEIQETLGRSYNVPDDIDEDELMGELDALEADMGMEDEAGVPSYLQPDKEPDLDAELNLPTAPSGHASAQHDRPQA-EDELGLPSVP 474 QKRMYE QRD L Q+FN++Q + + +KD + T+ A+K KE+K K VKI I++LQD++ D+M+ ++EIQE L RSY P ++DED+L ELDAL ++ ++++ SY LD + P P G + ++ DE GLP +P Sbjct: 71 QKRMYEQQRDNLAQQSFNMEQANYTIQSLKDTKTTVDAMKLGVKEMKKAYKQVKIDQIEDLQDQLEDMMEDANEIQEALSRSYGTP-ELDEDDLEAELDALGDELLADEDS---SY--------LDEAASAPAIPEGVPTDTKNKDGVLVDEFGLPQIP 217
BLAST of CK932786 vs. ExPASy Swiss-Prot
Match: YQ56_SCHPO (Uncharacterized protein C162.06c OS=Schizosaccharomyces pombe GN=SPCC162.06c PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.111e-18 Identity = 49/126 (38.89%), Postives = 77/126 (61.11%), Query Frame = 1 Query: 1 QKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMTALKSANKELKGMMKTVKIQDIDNLQDEMMDLMDVSHEIQETLGRSYNVPD-DIDEDELMGELDALEAD---MGMEDEAGVPSYLQPDKE 366 QK++YE Q L Q+FN++Q A +E +K+ T+ ++ ++LK K V I+ I+ LQDE+ D MD + E+ E LG+ N+ D ++DE+EL EL+AL+ + +G + A PSYL P E Sbjct: 71 QKKIYESQLQQLQQQSFNMEQAAMTTESLKNTMATVQTMQETARQLKSQSKNVSIEKIEKLQDEIQDYMDAAGELNEVLGQ--NMTDINVDEEELDAELEALQQESSWLGDQSTAEKPSYLMPSNE 194 The following BLAST results are available for this feature:
BLAST of CK932786 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK932786 ID=CK932786; Name=CK932786; organism=Citrus sinensis; type=EST; length=611bpback to top |