CK932786

Overview
NameCK932786
Unique NameCK932786
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length611
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932786 vs. ExPASy Swiss-Prot
Match: CHMP5_DICDI (Charged multivesicular body protein 5 OS=Dictyostelium discoideum GN=chmp5 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.810e-27
Identity = 66/161 (40.99%), Postives = 99/161 (61.49%), Query Frame = 1
Query:    1 QKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMTALKSANKELKGMMKTVKIQDIDNLQDEMMDLMDVSHEIQETLGRSYNVPDDIDEDELMGELDALEADMGMEDEAGVPSYLQPDKEPDLDAELNLPTAPSGHASAQHDRPQAEDELGLPSVPQAS 483
            QK+MYE QRD + + +FN++Q  FA+E ++D   T++A+K   K++K  +K +KI+D+D++QDEM DL+D ++EIQE+LGR+Y  PD +DE EL  EL ++  +  +E EA +PSYL     P  D           H S       + DE GLP   +AS
Sbjct:   70 QKKMYERQRDQMASTSFNMEQTKFATESMRDTITTVSAMKQGAKDMKTQLKHIKIEDVDDMQDEMQDLLDYNNEIQESLGRAYQTPDTLDESELEAELMSMGEE--LELEASMPSYLMTPSVPTTDP----------HQS-------SVDEYGLPIGQEAS 211          
BLAST of CK932786 vs. ExPASy Swiss-Prot
Match: CHMP5_XENTR (Charged multivesicular body protein 5 OS=Xenopus tropicalis GN=chmp5 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 4.658e-25
Identity = 66/159 (41.51%), Postives = 96/159 (60.38%), Query Frame = 1
Query:    1 QKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMTALKSANKELKGMMKTVKIQDIDNLQDEMMDLMDVSHEIQETLGRSYNVPDDIDEDELMGELDALEADMGMEDEAGVPSYLQPDKEPDLDAELNLPTAPSGHASAQHDRPQA-EDELGLPSVP 474
            QKRMYE QRD L  Q+FN++Q  +A + +KD + T+ A+K   KE+K   K VKI  I++LQD++ D+M+ ++EIQE L RSY  P +IDED+L  ELDAL  ++ ++D+    SY        LD   + P  P G  +   ++     DE GLP +P
Sbjct:   71 QKRMYEQQRDNLNQQSFNMEQTNYAIQSLKDTKTTVDAMKVGAKEMKKAYKQVKIDQIEDLQDQLEDMMENANEIQEALSRSYGTP-EIDEDDLEAELDALGDELLLDDDT---SY--------LDEAASAPAIPEGVPNDSKNKDGVLVDEFGLPQIP 217          
BLAST of CK932786 vs. ExPASy Swiss-Prot
Match: CHMP5_DANRE (Charged multivesicular body protein 5 OS=Danio rerio GN=chmp5 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 4.658e-25
Identity = 68/163 (41.72%), Postives = 96/163 (58.90%), Query Frame = 1
Query:    1 QKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMTALKSANKELKGMMKTVKIQDIDNLQDEMMDLMDVSHEIQETLGRSYNVPDDIDEDELMGELDALEADMGMEDEAGVPSYLQPDKEPDLDAELNLPTAPSGHASAQHDRPQAE-----DELGLPSVP 474
            QKRMYEGQRD L  Q+FN++Q  +  + +KD + T+ A+K   KE+K   K VKI  I++LQD++ D+M+ ++E+QE L RSY  P +IDED+L  ELDAL  ++ ++D+    SY        LD   + P  P G   A  DR         DE GLP +P
Sbjct:   71 QKRMYEGQRDQLMQQSFNMEQANYTIQTLKDTKTTVEAMKIGAKEMKKAYKNVKIDQIEDLQDQLEDMMEDANEVQEALSRSYGTP-EIDEDDLEAELDALGDELLLDDD---NSY--------LDEASSAPAIPEG---APGDRTTNRDGVLVDEFGLPQIP 218          
BLAST of CK932786 vs. ExPASy Swiss-Prot
Match: CHMP5_XENLA (Charged multivesicular body protein 5 OS=Xenopus laevis GN=chmp5 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.312e-24
Identity = 65/159 (40.88%), Postives = 95/159 (59.75%), Query Frame = 1
Query:    1 QKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMTALKSANKELKGMMKTVKIQDIDNLQDEMMDLMDVSHEIQETLGRSYNVPDDIDEDELMGELDALEADMGMEDEAGVPSYLQPDKEPDLDAELNLPTAPSGHASAQHDRPQA-EDELGLPSVP 474
            QKRMYE QRD L  Q+FN++Q  +  + +KD + T+ A+K   KE+K   K VKI  I++LQD++ D+M+ ++EIQE L RSY  P +IDED+L  ELDAL  ++ ++D+    SY        LD   + P  P G  +   ++     DE GLP +P
Sbjct:   71 QKRMYEQQRDNLNQQSFNMEQANYTIQTLKDTKTTVDAMKVGAKEMKKAYKQVKIDQIEDLQDQLEDMMENANEIQEALSRSYGTP-EIDEDDLEAELDALGDELLLDDDT---SY--------LDEAASAPAIPEGVPNDSKNKDGVLVDEFGLPQIP 217          
BLAST of CK932786 vs. ExPASy Swiss-Prot
Match: CHMP5_RAT (Charged multivesicular body protein 5 OS=Rattus norvegicus GN=Chmp5 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.943e-24
Identity = 64/159 (40.25%), Postives = 96/159 (60.38%), Query Frame = 1
Query:    1 QKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMTALKSANKELKGMMKTVKIQDIDNLQDEMMDLMDVSHEIQETLGRSYNVPDDIDEDELMGELDALEADMGMEDEAGVPSYLQPDKEPDLDAELNLPTAPSGHASAQHDRPQA-EDELGLPSVP 474
            QKRMYE QRD L  Q+FN++Q  +  + +KD + T+ A+K   KE+K   K VKI  I++LQD++ D+M+ ++EIQE LGRSY  P ++DED+L  ELDAL  ++  ++++   SY        LD   + P  P G  +   ++     DE GLP +P
Sbjct:   71 QKRMYEQQRDNLAQQSFNMEQANYTIQSLKDTKTTVDAMKLGVKEMKKAYKEVKIDQIEDLQDQLEDMMEDANEIQEALGRSYGTP-ELDEDDLEAELDALGDELLADEDS---SY--------LDEAASAPAIPEGVPTDTKNKDGVLVDEFGLPQIP 217          
BLAST of CK932786 vs. ExPASy Swiss-Prot
Match: CHMP5_MOUSE (Charged multivesicular body protein 5 OS=Mus musculus GN=Chmp5 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.943e-24
Identity = 64/159 (40.25%), Postives = 96/159 (60.38%), Query Frame = 1
Query:    1 QKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMTALKSANKELKGMMKTVKIQDIDNLQDEMMDLMDVSHEIQETLGRSYNVPDDIDEDELMGELDALEADMGMEDEAGVPSYLQPDKEPDLDAELNLPTAPSGHASAQHDRPQA-EDELGLPSVP 474
            QKRMYE QRD L  Q+FN++Q  +  + +KD + T+ A+K   KE+K   K VKI  I++LQD++ D+M+ ++EIQE LGRSY  P ++DED+L  ELDAL  ++  ++++   SY        LD   + P  P G  +   ++     DE GLP +P
Sbjct:   71 QKRMYEQQRDNLAQQSFNMEQANYTIQSLKDTKTTVDAMKLGVKEMKKAYKEVKIDQIEDLQDQLEDMMEDANEIQEALGRSYGTP-ELDEDDLEAELDALGDELLADEDS---SY--------LDEAASAPAIPEGVPTDTKNKDGVLVDEFGLPQIP 217          
BLAST of CK932786 vs. ExPASy Swiss-Prot
Match: CHMP5_DROME (Charged multivesicular body protein 5 OS=Drosophila melanogaster GN=CG6259 PE=1 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 5.150e-24
Identity = 60/162 (37.04%), Postives = 95/162 (58.64%), Query Frame = 1
Query:    1 QKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMTALKSANKELKGMMKTVKIQDIDNLQDEMMDLMDVSHEIQETLGRSYNVPDDIDEDELMGELDALEADMGMEDEAGVPSYLQPDKEPDLDAELNLPTAPSGHASAQHDRPQAE----DELGLPSVP 474
            QK+ YE Q + L NQ+FN++Q  +A++ +KD Q T+ A+K   K++K   K + I  I+++QD+M D+ + + E+QE LGR+Y +P ++D+D+L  ELDAL  ++ ++D+    SY        LD  +  P APS    A    P       DE GLP +P
Sbjct:   71 QKKAYEQQAESLRNQSFNMEQANYAAQSLKDTQATVAAMKDGVKQMKTEYKKINIDQIEDIQDDMADMFEQADEVQEALGRTYGMP-EVDDDDLQAELDALGDEIALDDDT---SY--------LDDVVKAPEAPSREPGADSIVPGKSTIETDEFGLPKIP 220          
BLAST of CK932786 vs. ExPASy Swiss-Prot
Match: CHMP5_PONAB (Charged multivesicular body protein 5 OS=Pongo abelii GN=CHMP5 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.957e-23
Identity = 63/159 (39.62%), Postives = 95/159 (59.75%), Query Frame = 1
Query:    1 QKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMTALKSANKELKGMMKTVKIQDIDNLQDEMMDLMDVSHEIQETLGRSYNVPDDIDEDELMGELDALEADMGMEDEAGVPSYLQPDKEPDLDAELNLPTAPSGHASAQHDRPQA-EDELGLPSVP 474
            QKRMYE QRD L  Q+FN++Q  +  + +KD + T+ A+K   KE+K   K VKI  I++LQD++ D+M+ ++EIQE L RSY  P ++DED+L  ELDAL  ++  ++++   SY        LD   + P  P G  +   ++     DE GLP +P
Sbjct:   71 QKRMYEQQRDNLAQQSFNMEQANYTIQSLKDTKTTVDAMKLGVKEMKKAYKQVKIDQIEDLQDQLEDMMEDANEIQEALSRSYGTP-ELDEDDLEAELDALGDELLADEDS---SY--------LDEAASAPAIPEGVPTDTKNKDGVLVDEFGLPQIP 217          
BLAST of CK932786 vs. ExPASy Swiss-Prot
Match: CHMP5_HUMAN (Charged multivesicular body protein 5 OS=Homo sapiens GN=CHMP5 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.957e-23
Identity = 63/159 (39.62%), Postives = 95/159 (59.75%), Query Frame = 1
Query:    1 QKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMTALKSANKELKGMMKTVKIQDIDNLQDEMMDLMDVSHEIQETLGRSYNVPDDIDEDELMGELDALEADMGMEDEAGVPSYLQPDKEPDLDAELNLPTAPSGHASAQHDRPQA-EDELGLPSVP 474
            QKRMYE QRD L  Q+FN++Q  +  + +KD + T+ A+K   KE+K   K VKI  I++LQD++ D+M+ ++EIQE L RSY  P ++DED+L  ELDAL  ++  ++++   SY        LD   + P  P G  +   ++     DE GLP +P
Sbjct:   71 QKRMYEQQRDNLAQQSFNMEQANYTIQSLKDTKTTVDAMKLGVKEMKKAYKQVKIDQIEDLQDQLEDMMEDANEIQEALSRSYGTP-ELDEDDLEAELDALGDELLADEDS---SY--------LDEAASAPAIPEGVPTDTKNKDGVLVDEFGLPQIP 217          
BLAST of CK932786 vs. ExPASy Swiss-Prot
Match: YQ56_SCHPO (Uncharacterized protein C162.06c OS=Schizosaccharomyces pombe GN=SPCC162.06c PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.111e-18
Identity = 49/126 (38.89%), Postives = 77/126 (61.11%), Query Frame = 1
Query:    1 QKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMTALKSANKELKGMMKTVKIQDIDNLQDEMMDLMDVSHEIQETLGRSYNVPD-DIDEDELMGELDALEAD---MGMEDEAGVPSYLQPDKE 366
            QK++YE Q   L  Q+FN++Q A  +E +K+   T+  ++   ++LK   K V I+ I+ LQDE+ D MD + E+ E LG+  N+ D ++DE+EL  EL+AL+ +   +G +  A  PSYL P  E
Sbjct:   71 QKKIYESQLQQLQQQSFNMEQAAMTTESLKNTMATVQTMQETARQLKSQSKNVSIEKIEKLQDEIQDYMDAAGELNEVLGQ--NMTDINVDEEELDAELEALQQESSWLGDQSTAEKPSYLMPSNE 194          
The following BLAST results are available for this feature:
BLAST of CK932786 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
CHMP5_DICDI3.810e-2740.99Charged multivesicular body protein 5 OS=Dictyoste... [more]
CHMP5_XENTR4.658e-2541.51Charged multivesicular body protein 5 OS=Xenopus t... [more]
CHMP5_DANRE4.658e-2541.72Charged multivesicular body protein 5 OS=Danio rer... [more]
CHMP5_XENLA2.312e-2440.88Charged multivesicular body protein 5 OS=Xenopus l... [more]
CHMP5_RAT3.943e-2440.25Charged multivesicular body protein 5 OS=Rattus no... [more]
CHMP5_MOUSE3.943e-2440.25Charged multivesicular body protein 5 OS=Mus muscu... [more]
CHMP5_DROME5.150e-2437.04Charged multivesicular body protein 5 OS=Drosophil... [more]
CHMP5_PONAB1.957e-2339.62Charged multivesicular body protein 5 OS=Pongo abe... [more]
CHMP5_HUMAN1.957e-2339.62Charged multivesicular body protein 5 OS=Homo sapi... [more]
YQ56_SCHPO1.111e-1838.89Uncharacterized protein C162.06c OS=Schizosaccharo... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004529_D03 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0001_IIF_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932786 ID=CK932786; Name=CK932786; organism=Citrus sinensis; type=EST; length=611bp
CAAAAGCGAATGTATGAAGGTCAGCGTGATATGCTTTACAATCAGACATT
CAACCTTGATCAAGTTGCATTTGCTTCGGAGGGTATTAAAGATGCACAAC
AAACTATGACAGCTTTGAAAAGCGCCAACAAGGAGTTGAAGGGAATGATG
AAAACCGTGAAGATTCAAGACATAGATAACTTGCAAGATGAGATGATGGA
CCTGATGGATGTGAGCCATGAAATTCAAGAGACGCTTGGTAGAAGTTATA
ATGTTCCTGATGACATTGACGAGGACGAACTCATGGGTGAACTTGATGCT
CTGGAAGCAGACATGGGAATGGAAGATGAAGCCGGAGTTCCCTCTTATCT
TCAACCCGACAAGGAACCTGATTTGGATGCAGAGCTCAACTTGCCTACAG
CACCTAGTGGTCATGCATCAGCACAGCATGACAGACCACAGGCTGAGGAT
GAACTGGGTTTACCTTCTGTCCCTCAGGCGTCCATCCGTGGTTAGGGATT
TACTGGCTGTGTCTATGCGTGTGTGCATCAGGCAGAATCAGATGGAGCTT
GTCATTGTATACTGATTGTGCAGAAACCGCTTTTATTCATGTAGTTATTC
AATTGATACTG
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