CK932790

Overview
NameCK932790
Unique NameCK932790
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length627
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932790 vs. ExPASy Swiss-Prot
Match: AGL6_ARATH (Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana GN=AGL6 PE=1 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 4.704e-44
Identity = 94/156 (60.26%), Postives = 111/156 (71.15%), Query Frame = 1
Query:    4 KAKYHSLQRTQRHLLGEDLGPLSVKELQNLEKQLEGALALARQRKTQIMIEQVEDLRKKERQLGDINKQLRIKLETEGQSFKAIQDLW----XXXXXXXXXXXFSVHPSHDSPMNCDPEPALQIGYLN--YLPSEGSSVPK-NTVGETNFIQGWVL 450
            K+KY SL RT R+LLGEDLG + VKELQ LE+QLE AL   RQRKTQ+M+E++EDLRKKERQLGDINKQL+IK ETEG +FK  QDLW               F V PSH + ++C+ EP LQIG+    Y+  EGSSV K N  GETNF+QGWVL
Sbjct:   97 KSKYESLVRTNRNLLGEDLGEMGVKELQALERQLEAALTATRQRKTQVMMEEMEDLRKKERQLGDINKQLKIKFETEGHAFKTFQDLWANSAASVAGDPNNSEFPVEPSHPNVLDCNTEPFLQIGFQQHYYVQGEGSSVSKSNVAGETNFVQGWVL 252          
BLAST of CK932790 vs. ExPASy Swiss-Prot
Match: MADS6_ORYSJ (MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica GN=MADS6 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 4.265e-37
Identity = 86/156 (55.13%), Postives = 112/156 (71.79%), Query Frame = 1
Query:    4 KAKYHSLQRTQRHLLGEDLGPLSVKELQNLEKQLEGALALARQRKTQIMIEQVEDLRKKERQLGDINKQLRIKLETEG--QSFKAIQDL-WXXXXXXXXXXXFSVHPSHDSPMNCDPEPALQIGYLN-YLPSEGSSVPKNTV---GETNFIQGWVL 450
            KAK+ +LQRTQRHLLGEDLGPLSVKELQ LEKQLE AL+ ARQRKTQ+M+EQVE+LR+KERQLG+IN+QL+ KLE EG   +++A+Q   W           +   P H + M  D EP LQIGY + ++P+E +++ ++T     E NF+ GWVL
Sbjct:   97 KAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLKHKLEVEGSTSNYRAMQQASWAQGAVVENGAAYVQPPPHSAAM--DSEPTLQIGYPHQFVPAEANTIQRSTAPAGAENNFMLGWVL 250          
BLAST of CK932790 vs. ExPASy Swiss-Prot
Match: MAD17_ORYSJ (MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica GN=MADS17 PE=1 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 4.413e-34
Identity = 81/155 (52.26%), Postives = 99/155 (63.87%), Query Frame = 1
Query:    4 KAKYHSLQRTQRHLLGEDLGPLSVKELQNLEKQLEGALALARQRKTQIMIEQVEDLRKKERQLGDINKQLRIKLETEGQSF---KAIQDLWXXXXXXXXXXXFSVHPSHDSPMNCDPEPALQIGYLNYLPSEGSSVPKNTVG---ETNFIQGWVL 450
            K K   LQR+QRH+LGEDLGPLS+KELQ LEKQLE +L+ ARQRKTQIM+EQV+DLR+KERQLG++NKQL+ KLE E  S     AIQD W            +  P    P + D EP LQIGY  ++  E ++   N  G     NF+ GW L
Sbjct:   99 KTKLECLQRSQRHMLGEDLGPLSIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQLKNKLEAEADSSNCRSAIQDSWVHGTVVSGGRVLNAQP----PPDIDCEPTLQIGYYQFVRPEAANPRSNGGGGDQNNNFVMGWPL 249          
BLAST of CK932790 vs. ExPASy Swiss-Prot
Match: AGL13_ARATH (Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana GN=AGL13 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 6.172e-28
Identity = 75/151 (49.67%), Postives = 100/151 (66.23%), Query Frame = 1
Query:    4 KAKYHSLQRTQRHLLGEDLGPLSVKELQNLEKQLEGALALARQRKTQIMIEQVEDLRKKERQLGDINKQLRIKLETEGQSFKAIQD-LWXXXXXXXXXXXFSVHPSHDSPM-NCDPEPALQIGY-LNYLPSEGSSVPKNTV---GETNFIQ 438
            K KY SL RT R+L+GEDL  +S+KELQ LE+QLEGAL+  R++KTQ+M+EQ+E+LR+KER+LGDIN +L  KLETE   FK  QD L            FS+  +H + + +C+    LQIG+  +Y   EGSSV K+      ETNF+Q
Sbjct:   96 KCKYESLLRTHRNLVGEDLEGMSIKELQTLERQLEGALSATRKQKTQVMMEQMEELRRKERELGDINNKL--KLETEDHDFKGFQDLLLNPVLTAGCSTDFSLQSTHQNYISDCNLGYFLQIGFQQHYEQGEGSSVTKSNARSDAETNFVQ 244          
BLAST of CK932790 vs. ExPASy Swiss-Prot
Match: AGL9_SINAL (Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba GN=AGL9 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.840e-19
Identity = 58/152 (38.16%), Postives = 83/152 (54.61%), Query Frame = 1
Query:    4 KAKYHSLQRTQRHLLGEDLGPLSVKELQNLEKQLEGALALARQRKTQIMIEQVEDLRKKERQLGDINKQLRIKLETEGQSFKAI----QDLWXXXXXXXXXXXFSVHPSHDSPMNCDPEPALQIGYLNYLPSEGSSVPKNTVGETNFIQGWV 447
            K +Y +LQRTQR+LLGEDLGPLS KEL+ LE+QL+ +L   R  +TQ M++Q+ DL+ KER L + NK LR++L    Q    +    +D              + H +   P+ C  EP LQ+GY         + P     E N++ GW+
Sbjct:  102 KERYDALQRTQRNLLGEDLGPLSTKELELLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLNETNKTLRLRLADGYQMPLQLNPNQEDHHVDYGRHDQQQQQNSHHAFFQPLEC--EPILQMGYQGQQDHGMEAGP----SENNYMLGWL 247          
BLAST of CK932790 vs. ExPASy Swiss-Prot
Match: AGL9_PETHY (Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida GN=FBP2 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 6.840e-19
Identity = 57/151 (37.75%), Postives = 87/151 (57.62%), Query Frame = 1
Query:    4 KAKYHSLQRTQRHLLGEDLGPLSVKELQNLEKQLEGALALARQRKTQIMIEQVEDLRKKERQLGDINKQLRIKLETEGQSFKAIQDLWXXXXXXXXXXXFSVHPSHDS---PMNCDPEPALQIGYLNYLPSEGSSVPKNTVGETNFIQGWV 447
            KA+Y +LQR+QR+LLGEDLGPL+ KEL++LE+QL+ +L   R  +TQ+M++Q++DL++KE  L + N+ L+ +L  EG +       W            +     D    P+ C  EP LQIGY N   + G + P       N++ GW+
Sbjct:  100 KARYEALQRSQRNLLGEDLGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQLQDLQRKEHALNEANRTLKQRL-MEGSTLNL---QWQQNAQDVGYGRQATQTQGDGFFHPLEC--EPTLQIGYQNDPITVGGAGP----SVNNYMAGWL 240          
BLAST of CK932790 vs. ExPASy Swiss-Prot
Match: SEP3_ARATH (Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.599e-18
Identity = 58/150 (38.67%), Postives = 80/150 (53.33%), Query Frame = 1
Query:    4 KAKYHSLQRTQRHLLGEDLGPLSVKELQNLEKQLEGALALARQRKTQIMIEQVEDLRKKERQLGDINKQLRIKLETEGQSFKAIQDLWXXXXXXXXXXXFSVHPSHD--SPMNCDPEPALQIGYLNYLPSEGSSVPKNTVGETNFIQGWV 447
            K +Y +LQRTQR+LLGEDLGPLS KEL++LE+QL+ +L   R  +TQ M++Q+ DL+ KER L + NK LR++L    Q    +                    S     P+ C  EP LQIGY       G+    N     N++ GW+
Sbjct:  102 KERYDALQRTQRNLLGEDLGPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRLADGYQMPLQLNPNQEEVDHYGRHHHQQQQHSQAFFQPLEC--EPILQIGYQGQQDGMGAGPSVN-----NYMLGWL 244          
BLAST of CK932790 vs. ExPASy Swiss-Prot
Match: SEP2_ARATH (Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana GN=SEP2 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.791e-18
Identity = 59/152 (38.82%), Postives = 82/152 (53.95%), Query Frame = 1
Query:    4 KAKYHSLQRTQRHLLGEDLGPLSVKELQNLEKQLEGALALARQRKTQIMIEQVEDLRKKERQLGDINKQLRIKLETE-GQSFKAIQDLWXXXXXXXXXXXFSVHPSHDSPMNCDPEPALQIGYLNYLPSEGSSVPKNTVGE--TNFIQGWVL 450
            K +Y +LQR QR+LLGEDLGPL+ KEL+ LE+QL+G+L   R  KTQ M++Q+ DL+ KE  L D N+ L +KLE   G     I   W                S     + + +P LQIGY + + SE  +V      +    +I GW+L
Sbjct:   99 KGRYENLQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRCIKTQYMLDQLSDLQGKEHILLDANRALSMKLEDMIGVRHHHIGGGWEGGDQQNIAYGHPQAHSQGLYQSLECDPTLQIGYSHPVCSEQMAVTVQGQSQQGNGYIPGWML 250          
BLAST of CK932790 vs. ExPASy Swiss-Prot
Match: MTF1_PEA (MADS-box transcription factor 1 OS=Pisum sativum GN=MTF1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.685e-17
Identity = 57/151 (37.75%), Postives = 82/151 (54.30%), Query Frame = 1
Query:    4 KAKYHSLQRTQRHLLGEDLGPLSVKELQNLEKQLEGALALARQRKTQIMIEQVEDLRKKERQLGDINKQLRIKLETEGQSFKAIQDLWXXXXXXXXXXXFSVHPSHDSPMNCDP---EPALQIGYLNYLPSEGSSVPKNTVGETNFIQGWV 447
            KA+Y SLQR+QR+L+GEDLGPLS K+L+ LE+QL+ +L   R  +TQ M++Q+ DL++KE  L + N+ LR ++  EG    ++Q L               H   D      P   EP LQIGY      +  SV        N++ GW+
Sbjct:  102 KARYESLQRSQRNLMGEDLGPLSSKDLETLERQLDSSLKQIRSTRTQFMLDQLGDLQRKEHLLCEANRALRQRM--EGYQINSLQ-LNLSAEDMGYGRHHQGHTHGDELFQVQPIECEPTLQIGYHQ---GDPGSVVTAGPSMNNYMGGWL 246          
BLAST of CK932790 vs. ExPASy Swiss-Prot
Match: SEP1_ARATH (Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana GN=SEP1 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 6.402e-17
Identity = 55/155 (35.48%), Postives = 83/155 (53.55%), Query Frame = 1
Query:    4 KAKYHSLQRTQRHLLGEDLGPLSVKELQNLEKQLEGALALARQRKTQIMIEQVEDLRKKERQLGDINKQLRIKLETEGQSFKAIQDLWXXXXXXXXXXXFSVHPSHD----SPMNCDPEPALQIGYLNYLPSEGSSVPKNTVGE--TNFIQGWVL 450
            K +Y +LQR QR+LLGEDLGPL+ KEL+ LE+QL+G+L   R  KTQ M++Q+ DL+ KE+ L + N+ L +KL+                        ++ H +       P+ C+  P LQ+GY N + SE  +       +    +I GW+L
Sbjct:   99 KGRYENLQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKLDDMIGVRSHHMGGGGGWEGGEQNVTYAHHQAQSQGLYQPLECN--PTLQMGYDNPVCSEQITATTQAQAQQGNGYIPGWML 251          
The following BLAST results are available for this feature:
BLAST of CK932790 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
AGL6_ARATH4.704e-4460.26Agamous-like MADS-box protein AGL6 OS=Arabidopsis ... [more]
MADS6_ORYSJ4.265e-3755.13MADS-box transcription factor 6 OS=Oryza sativa su... [more]
MAD17_ORYSJ4.413e-3452.26MADS-box transcription factor 17 OS=Oryza sativa s... [more]
AGL13_ARATH6.172e-2849.67Agamous-like MADS-box protein AGL13 OS=Arabidopsis... [more]
AGL9_SINAL6.840e-1938.16Agamous-like MADS-box protein AGL9 homolog OS=Sina... [more]
AGL9_PETHY6.840e-1937.75Agamous-like MADS-box protein AGL9 homolog OS=Petu... [more]
SEP3_ARATH2.599e-1838.67Developmental protein SEPALLATA 3 OS=Arabidopsis t... [more]
SEP2_ARATH5.791e-1838.82Developmental protein SEPALLATA 2 OS=Arabidopsis t... [more]
MTF1_PEA1.685e-1737.75MADS-box transcription factor 1 OS=Pisum sativum G... [more]
SEP1_ARATH6.402e-1735.48Developmental protein SEPALLATA 1 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004529_D07 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0001_IIF_D07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932790 ID=CK932790; Name=CK932790; organism=Citrus sinensis; type=EST; length=627bp
GGGAAAGCAAAATATCATTCTCTTCAACGCACTCAAAGGCATTTGCTTGG
AGAGGATCTTGGACCGCTGAGTGTAAAGGAGCTGCAGAATCTTGAGAAAC
AGCTTGAAGGAGCCCTAGCACTGGCCAGGCAAAGGAAGACACAGATTATG
ATAGAGCAGGTGGAAGACCTCCGCAAAAAGGAGCGTCAGCTTGGAGATAT
CAACAAACAGCTCAGGATTAAGCTGGAGACTGAAGGGCAAAGTTTTAAGG
CCATTCAAGACCTGTGGAATTCTGCTGCTGCAGGTGCTGGAAATAGCAAC
TTCTCTGTTCATCCTTCTCATGACAGTCCCATGAACTGTGACCCGGAACC
TGCTCTACAAATTGGGTACCTGAATTATCTTCCATCTGAAGGGTCTTCAG
TGCCAAAGAATACGGTTGGTGAGACCAACTTCATCCAAGGATGGGTCCTT
TGAGTAGAGCATTGAGATATATGTAATTAAGCATACGTGATGATTATATA
ATTTTTTCTAATGGCTTTTGTACTAACTGGGGTTTGTAATATTTTGCCAA
GATACTCTACATACTTGTCGTATATGGGACATCATGTAATGTGGTTAGTA
AAAAAAAAAAAAAAAAAAAAAAAAAAA
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