CK932805

Overview
NameCK932805
Unique NameCK932805
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1486 contig Csv1_Contig1486:1..686. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK932805 vs. ExPASy Swiss-Prot
Match: PORA_CUCSA (Protochlorophyllide reductase, chloroplastic OS=Cucumis sativus GN=PORA PE=2 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 1.653e-80
Identity = 147/182 (80.77%), Postives = 164/182 (90.11%), Query Frame = 1
Query:  139 VPSAFSVPKEGKTSASFKDSSLFGVSFSEHAKADFSSSALRCKREFSQRNGVVRAQTMATASPAVDVSSPQGKKTLRKGSVIITGASSGLGLATAKALAETGKWHIIMACRDFLKAERAAKSAGMAKENYTIMHLDLASLDSVRQFVDTFRRSGRPLDVLVCNAAVYLPTAKEXTFTAEGFE 684
            V  A S+PKEGK+S   KDSSLFG+SFS+H K++FSSS LRCKRE +Q+ G +RAQT AT SPAV+ ++P GKKTLRKGSV+ITGASSGLGLATAKALAETGKWH+IMACRDFLKAERAAKSAG+ KENYT+MHLDLASLDSVRQFVD FR+SGRPLDVLVCNAAVYLPTAKE TFTAEGFE
Sbjct:    9 VSPALSIPKEGKSSVCLKDSSLFGISFSDHLKSEFSSSTLRCKRELNQQIGAIRAQTTATESPAVNKATPDGKKTLRKGSVVITGASSGLGLATAKALAETGKWHVIMACRDFLKAERAAKSAGITKENYTVMHLDLASLDSVRQFVDNFRQSGRPLDVLVCNAAVYLPTAKEPTFTAEGFE 190          
BLAST of CK932805 vs. ExPASy Swiss-Prot
Match: POR_PEA (Protochlorophyllide reductase, chloroplastic OS=Pisum sativum GN=3PCR PE=1 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 3.125e-71
Identity = 138/183 (75.41%), Postives = 159/183 (86.89%), Query Frame = 1
Query:  139 VPSAFSVPKEGKTSASFKDSSLFGVS-FSEHAKADFSSSALRCKREFSQRNGVVRAQTMATASPAVDVSSPQGKKTLRKGSVIITGASSGLGLATAKALAETGKWHIIMACRDFLKAERAAKSAGMAKENYTIMHLDLASLDSVRQFVDTFRRSGRPLDVLVCNAAVYLPTAKEXTFTAEGFE 684
            +P++FS+PKEGK  AS KDS+LFGVS  S+  K DF+SSALRCK E  Q+ G VRA+T A A+PAV+ SS +GKKTLRKG+V+ITGASSGLGLATAKALAE+GKWH+IMACRD+LKA RAAKSAG+AKENYTIMHLDLASLDSVRQFVD FRRS  PLDVL+ NAAVY PTAKE +FTA+GFE
Sbjct:    9 LPASFSIPKEGKIGASLKDSTLFGVSSLSDSLKGDFTSSALRCK-ELRQKVGAVRAETAAPATPAVNKSSSEGKKTLRKGNVVITGASSGLGLATAKALAESGKWHVIMACRDYLKAARAAKSAGLAKENYTIMHLDLASLDSVRQFVDNFRRSEMPLDVLINNAAVYFPTAKEPSFTADGFE 190          
BLAST of CK932805 vs. ExPASy Swiss-Prot
Match: PORA_ARATH (Protochlorophyllide reductase A, chloroplastic OS=Arabidopsis thaliana GN=PORA PE=2 SV=2)

HSP 1 Score: 266.159 bits (679), Expect = 1.187e-70
Identity = 139/188 (73.94%), Postives = 160/188 (85.11%), Query Frame = 1
Query:  139 VPSAFSVPKEGK----TSASFKDSSLFGVSFSEHAKADFSSSALRCKREFSQRNG--VVRAQTMATASPAVDVSSPQGKKTLRKGSVIITGASSGLGLATAKALAETGKWHIIMACRDFLKAERAAKSAGMAKENYTIMHLDLASLDSVRQFVDTFRRSGRPLDVLVCNAAVYLPTAKEXTFTAEGFE 684
            V SAFSV K+GK     S+SFK+SSLFGVS SE +KADF SS+LRCKRE S RN   ++RAQ +AT++P+V  SS   KKTLRKG+V++TGASSGLGLATAKALAETGKWH+IMACRDFLKAERAA+SAGM K++YT+MHLDLASLDSVRQFVD FRR+  PLDVLVCNAAVY PTA + TFTAEGFE
Sbjct:    9 VSSAFSVRKDGKLNASASSSFKESSLFGVSLSEQSKADFVSSSLRCKREQSLRNNKAIIRAQAIATSTPSVTKSSLDRKKTLRKGNVVVTGASSGLGLATAKALAETGKWHVIMACRDFLKAERAAQSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRAEMPLDVLVCNAAVYQPTANQPTFTAEGFE 196          
BLAST of CK932805 vs. ExPASy Swiss-Prot
Match: POR_DAUCA (Protochlorophyllide reductase, chloroplastic OS=Daucus carota GN=POR1 PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.451e-68
Identity = 135/184 (73.37%), Postives = 159/184 (86.41%), Query Frame = 1
Query:  139 VPSAFSVPKEGKTSASFKDSSLFGVSFSEHAKADFSSSALRCKREFSQ--RNGVVRAQTMATASPAVDVSSPQGKKTLRKGSVIITGASSGLGLATAKALAETGKWHIIMACRDFLKAERAAKSAGMAKENYTIMHLDLASLDSVRQFVDTFRRSGRPLDVLVCNAAVYLPTAKEXTFTAEGFE 684
            +PS+FS+ KEGK + S K++SLFGV+FS+  + DFSS  LR +R   Q  + G +R+Q +AT +P+V+ ++ +GKKTLRKGSVIITGASSGLGLATAKALAETGKWH+IMACRDFLKAERAAKSAGM KENYTIMHLDLASLDSVRQFV+TFRRS RPLDVLVCNAAVY PTAKE T+TA+GFE
Sbjct:    9 LPSSFSINKEGKANVSLKETSLFGVTFSDSLRTDFSS--LRTRRGCRQISQTGAIRSQAVAT-TPSVNRATGEGKKTLRKGSVIITGASSGLGLATAKALAETGKWHVIMACRDFLKAERAAKSAGMPKENYTIMHLDLASLDSVRQFVETFRRSERPLDVLVCNAAVYFPTAKEPTYTADGFE 189          
BLAST of CK932805 vs. ExPASy Swiss-Prot
Match: PORB_ARATH (Protochlorophyllide reductase B, chloroplastic OS=Arabidopsis thaliana GN=PORB PE=1 SV=3)

HSP 1 Score: 253.832 bits (647), Expect = 6.098e-67
Identity = 133/185 (71.89%), Postives = 154/185 (83.24%), Query Frame = 1
Query:  139 VPSAFSVPKEGK---TSASFKDSSLFGVSFSEHAKADFSSSALRCKREFSQRNGVVRAQTMATASPAVDVSSPQGKKTLRKGSVIITGASSGLGLATAKALAETGKWHIIMACRDFLKAERAAKSAGMAKENYTIMHLDLASLDSVRQFVDTFRRSGRPLDVLVCNAAVYLPTAKEXTFTAEGFE 684
            V SAFSV K+ K   +S+SFKDSSLFG S ++  K++  SS+LR KRE S RN  +RAQT AT+SP V   S  GKKTLRKG+V++TGASSGLGLATAKALAETGKW++IMACRDFLKAERAAKS GM K++YT+MHLDLASLDSVRQFVD FRR+  PLDVLVCNAAVY PTAKE T++AEGFE
Sbjct:    9 VSSAFSVRKDAKLNASSSSFKDSSLFGASITDQIKSEHGSSSLRFKREQSLRNLAIRAQTAATSSPTV-TKSVDGKKTLRKGNVVVTGASSGLGLATAKALAETGKWNVIMACRDFLKAERAAKSVGMPKDSYTVMHLDLASLDSVRQFVDNFRRTETPLDVLVCNAAVYFPTAKEPTYSAEGFE 192          
BLAST of CK932805 vs. ExPASy Swiss-Prot
Match: PORC_ARATH (Protochlorophyllide reductase C, chloroplastic OS=Arabidopsis thaliana GN=PORC PE=1 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 3.583e-59
Identity = 116/185 (62.70%), Postives = 150/185 (81.08%), Query Frame = 1
Query:  139 VPSAFSVPKEGKTSASFKDSSLFGVSFSEHAKADFSSSALRCKREFSQR---NGVVRAQTMATASPAVDVSSPQGKKTLRKGSVIITGASSGLGLATAKALAETGKWHIIMACRDFLKAERAAKSAGMAKENYTIMHLDLASLDSVRQFVDTFRRSGRPLDVLVCNAAVYLPTAKEXTFTAEGFE 684
            +PS  S+ KEGK +AS K+++  G SFS H +A+  S+ L  K +  Q+   +  +RAQT+ TA+P  + +SP+ KKT RKG+ +ITGASSGLGLATAKALA+TGKWH+IMACR+FLKAE+AA+S GM+KE+YT+MHLDLASL+SV+QFV+ FRR+ +PLDVLVCNAAVY PTAKE +FTAEGFE
Sbjct:   10 LPSTISIQKEGKFNASLKETTFTGSSFSNHLRAEKISTLLTIKEQRRQKPRFSTGIRAQTV-TATPPANEASPEQKKTERKGTAVITGASSGLGLATAKALADTGKWHVIMACRNFLKAEKAARSVGMSKEDYTVMHLDLASLESVKQFVENFRRTEQPLDVLVCNAAVYQPTAKEPSFTAEGFE 193          
BLAST of CK932805 vs. ExPASy Swiss-Prot
Match: PORB_HORVU (Protochlorophyllide reductase B, chloroplastic OS=Hordeum vulgare GN=PORB PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.722e-53
Identity = 110/182 (60.44%), Postives = 135/182 (74.18%), Query Frame = 1
Query:  139 VPSAFSVPKEGKTSASFKDSSLFGVSFSEHAKADFSSSALRCKREFSQRNGVVRAQTMATASPAVDVSSPQGKKTLRKGSVIITGASSGLGLATAKALAETGKWHIIMACRDFLKAERAAKSAGMAKENYTIMHLDLASLDSVRQFVDTFRRSGRPLDVLVCNAAVYLPTAKEXTFTAEGFE 684
            +PSA S  KEG      KDS+ FGV  ++  K D +S  LR KR  +  +  +RAQ  A ++P    +SP GKKT+R G+ IITGASSGLGLATAKALAE+GKWH+IMACRD+LK  RAA++AGM K +YTI+HLDLASLDSVRQFV   R+   P+DV+VCNAAVY PTAKE +FTA+GFE
Sbjct:   10 LPSALSARKEGAA----KDSAFFGVRLADGLKLDATSLGLRTKR-VNTSSVAIRAQAAAVSAPTATPASPAGKKTVRTGNAIITGASSGLGLATAKALAESGKWHVIMACRDYLKTARAARAAGMPKGSYTIVHLDLASLDSVRQFVKNVRQLDMPIDVVVCNAAVYQPTAKEPSFTADGFE 186          
BLAST of CK932805 vs. ExPASy Swiss-Prot
Match: PORB_ORYSJ (Protochlorophyllide reductase B, chloroplastic OS=Oryza sativa subsp. japonica GN=PORB PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.250e-53
Identity = 112/183 (61.20%), Postives = 137/183 (74.86%), Query Frame = 1
Query:  139 VPSAFSVPKEGKTSASFKDSSLFGVSFSEHAKADFSSSALRCKREFSQRNGVVRAQ-TMATASPAVDVSSPQGKKTLRKGSVIITGASSGLGLATAKALAETGKWHIIMACRDFLKAERAAKSAGMAKENYTIMHLDLASLDSVRQFVDTFRRSGRPLDVLVCNAAVYLPTAKEXTFTAEGFE 684
            +PSA S  KEG    + KDS+  GV   +  K + S+  LR KR  S  +  +RAQ + A +SP V  +SP GK+TLRKG+ +ITGASSGLGLATAKALAETG+WH++M CRDFLKA RAAK+AGM K +YTI+HLDLASLDSVRQFV   RR   P+DV+VCNAAVY PTAK+ +FTA+GFE
Sbjct:   12 LPSALSARKEG----AVKDSAFLGVRLGDGLKLETSALGLRTKR-VSTSSVAIRAQASAAVSSPTVTPASPSGKQTLRKGTAVITGASSGLGLATAKALAETGRWHVVMGCRDFLKASRAAKAAGMEKGSYTIVHLDLASLDSVRQFVANVRRLEMPVDVVVCNAAVYQPTAKQPSFTADGFE 189          
BLAST of CK932805 vs. ExPASy Swiss-Prot
Match: PORA_HORVU (Protochlorophyllide reductase A, chloroplastic OS=Hordeum vulgare GN=PORA PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.458e-52
Identity = 113/185 (61.08%), Postives = 137/185 (74.05%), Query Frame = 1
Query:  139 VPSAFSVPKEGKT--SASFKDSSLF-GVSFSEHAKADFSSSALRCKREFSQRNGVVRAQTMATASPAVDVSSPQGKKTLRKGSVIITGASSGLGLATAKALAETGKWHIIMACRDFLKAERAAKSAGMAKENYTIMHLDLASLDSVRQFVDTFRRSGRPLDVLVCNAAVYLPTAKEXTFTAEGFE 684
            +PS  SVPK+G +  + + KD++ F GVS    +KA  +S A+R +        V  A +  T SP    SSP GKKTLR+G V+ITGASSGLGLA AKALAETGKWH++MACRDFLKA +AAK+AGMA  +YT+MHLDLASLDSVRQFVD FRR+  PLDVLVCNAA+Y PTA+  TFTA+G E
Sbjct:    6 LPSTLSVPKKGSSMGAVAVKDTAAFLGVS----SKAKKASLAVRTQ--------VATAPSPVTTSPGSTASSPSGKKTLRQGVVVITGASSGLGLAAAKALAETGKWHVVMACRDFLKASKAAKAAGMADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHE 178          
BLAST of CK932805 vs. ExPASy Swiss-Prot
Match: PORA_WHEAT (Protochlorophyllide reductase A, chloroplastic OS=Triticum aestivum GN=PORA PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.248e-52
Identity = 112/185 (60.54%), Postives = 137/185 (74.05%), Query Frame = 1
Query:  139 VPSAFSVPKEGKT--SASFKDSSLF-GVSFSEHAKADFSSSALRCKREFSQRNGVVRAQTMATASPAVDVSSPQGKKTLRKGSVIITGASSGLGLATAKALAETGKWHIIMACRDFLKAERAAKSAGMAKENYTIMHLDLASLDSVRQFVDTFRRSGRPLDVLVCNAAVYLPTAKEXTFTAEGFE 684
            +PS  SVPK+G +  +A+ KD++ F GVS    +KA  +S A+R +        V  A +  T SP    + P GKKTLR+G V+ITGASSGLGLA AKALAETGKWH++MACRDFLKA +AAK+AGMA  +YT+MHLDLASLDSVRQFVD FRR+  PLDVLVCNAA+Y PTA+  TFTA+G E
Sbjct:    6 LPSTLSVPKKGSSMGAAAVKDTAAFLGVS----SKAKKASLAVRTQ--------VATAPSSVTTSPGSATAKPSGKKTLRQGVVVITGASSGLGLAAAKALAETGKWHVVMACRDFLKASKAAKAAGMADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHE 178          
The following BLAST results are available for this feature:
BLAST of CK932805 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
PORA_CUCSA1.653e-8080.77Protochlorophyllide reductase, chloroplastic OS=Cu... [more]
POR_PEA3.125e-7175.41Protochlorophyllide reductase, chloroplastic OS=Pi... [more]
PORA_ARATH1.187e-7073.94Protochlorophyllide reductase A, chloroplastic OS=... [more]
POR_DAUCA1.451e-6873.37Protochlorophyllide reductase, chloroplastic OS=Da... [more]
PORB_ARATH6.098e-6771.89Protochlorophyllide reductase B, chloroplastic OS=... [more]
PORC_ARATH3.583e-5962.70Protochlorophyllide reductase C, chloroplastic OS=... [more]
PORB_HORVU1.722e-5360.44Protochlorophyllide reductase B, chloroplastic OS=... [more]
PORB_ORYSJ2.250e-5361.20Protochlorophyllide reductase B, chloroplastic OS=... [more]
PORA_HORVU1.458e-5261.08Protochlorophyllide reductase A, chloroplastic OS=... [more]
PORA_WHEAT3.248e-5260.54Protochlorophyllide reductase A, chloroplastic OS=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004529_C09 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0001_IIF_C09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932805 ID=CK932805; Name=CK932805; organism=Citrus sinensis; type=EST; length=686bp
GGGGGTGGACTTTACTTTAAATACAGCAATATCGCTTGCTATCTCTTTCA
TTCTCTCAACATTGGGCAGAAAAAAAAATCCTTTAAAAAGAAAGTCTCAA
CACTAAGCTAGTTAATGGCCCTCCAAGCTGCTGCTTTGGTTCCCTCTGCT
TTCTCAGTCCCCAAAGAGGGCAAAACTAGTGCATCTTTCAAGGACTCAAG
TCTTTTTGGAGTTTCATTCTCAGAACATGCAAAGGCTGATTTCAGCTCTT
CTGCATTAAGATGCAAGAGAGAATTCAGCCAAAGAAATGGGGTGGTAAGA
GCCCAAACGATGGCTACTGCCTCTCCAGCAGTCGATGTTTCTTCCCCACA
AGGGAAGAAAACTCTCAGAAAAGGCAGCGTTATAATCACCGGCGCATCGT
CTGGATTGGGGCTGGCCACAGCTAAGGCTTTAGCTGAAACTGGGAAATGG
CATATAATCATGGCCTGCAGGGATTTTCTCAAGGCTGAAAGAGCCGCCAA
GTCGGCTGGCATGGCTAAGGAGAACTACACTATCATGCATTTAGATCTGG
CTTCCCTTGACAGTGTTCGCCAATTTGTTGATACCTTCAGGCGATCAGGC
AGACCTCTCGATGTGCTAGTTTGCAATGCTGCTGTTTATTTGCCAACTGC
TAAGGAGCNTACATTTACGGCTGAGGGATTTGAACT
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