CK932835

Overview
NameCK932835
Unique NameCK932835
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length632
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12666 contig Csv1_Contig12666:6..637. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK932835 vs. ExPASy Swiss-Prot
Match: TKTC_SPIOL (Transketolase, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 328.946 bits (842), Expect = 1.276e-89
Identity = 158/210 (75.24%), Postives = 173/210 (82.38%), Query Frame = 2
Query:    2 HISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVAEGATLEAEWNXXXXXXXXXXXXXXXXXXSISSGQLPAGWEKALPTYTPESPAEATRNLSQTCLNALAKTXXXXXXXSADLASSNMTLLXXFGDFQ 631
            HISIDGDT IAFTE+VD RFE LGWHVIWVKNGNTGYD+IRAAIKEAK VTDKPTLI+VTTTIGFGSPNK+NSYSVHGSALG+KEV+ATR+NLGWPYEPFHVPE+VKKHWSRH  EGA+LEAEWN                  SI++G+ PAGWEKALPTYTPE+P +ATRNLSQ CLNALAK        SADLASSNMTLL  FGDF+
Sbjct:  264 HISIDGDTAIAFTESVDLRFEALGWHVIWVKNGNTGYDEIRAAIKEAKTVTDKPTLIKVTTTIGFGSPNKSNSYSVHGSALGSKEVEATRQNLGWPYEPFHVPEEVKKHWSRHTPEGASLEAEWNTKFAEYEKKYPEDATEFKSITTGEFPAGWEKALPTYTPETPGDATRNLSQQCLNALAKVIPGLLGGSADLASSNMTLLKMFGDFR 473          
BLAST of CK932835 vs. ExPASy Swiss-Prot
Match: TKTC_SOLTU (Transketolase, chloroplastic OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 325.865 bits (834), Expect = 1.081e-88
Identity = 160/210 (76.19%), Postives = 168/210 (80.00%), Query Frame = 2
Query:    2 HISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVAEGATLEAEWNXXXXXXXXXXXXXXXXXXSISSGQLPAGWEKALPTYTPESPAEATRNLSQTCLNALAKTXXXXXXXSADLASSNMTLLXXFGDFQ 631
            HISIDGDTEIAFTE+V  RFE LGWHVIWVKNGNTGYD+IRAAIKEAKAV DKPT+I+VTTTIGFGSPNKANSYSVHGS LGAKEV+ATR NLGWPYEPFHVPEDVK HWSRH  EGA LE EWN                  SI +G+LPAGWEKALPTYTPESPA+ATRNLSQ  LNALAK        SADLASSNMTLL  FGDFQ
Sbjct:  264 HISIDGDTEIAFTEDVSARFESLGWHVIWVKNGNTGYDEIRAAIKEAKAVKDKPTMIKVTTTIGFGSPNKANSYSVHGSGLGAKEVEATRNNLGWPYEPFHVPEDVKSHWSRHTPEGAALETEWNAKFAEYEKKYAEEAADLKSIITGELPAGWEKALPTYTPESPADATRNLSQQNLNALAKVLPGFLGGSADLASSNMTLLKMFGDFQ 473          
BLAST of CK932835 vs. ExPASy Swiss-Prot
Match: TKTC_CRAPL (Transketolase, chloroplastic (Fragment) OS=Craterostigma plantagineum GN=TKT3 PE=1 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 2.943e-86
Identity = 153/210 (72.86%), Postives = 170/210 (80.95%), Query Frame = 2
Query:    2 HISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVAEGATLEAEWNXXXXXXXXXXXXXXXXXXSISSGQLPAGWEKALPTYTPESPAEATRNLSQTCLNALAKTXXXXXXXSADLASSNMTLLXXFGDFQ 631
            HISIDGDT+IAFTE+VDKRFE LGWHVIWVKNGN GYD IRAAIKEA+AV DKPT+I++TTTIGFGSPNK+NSYSVHGSALGAKEV+ATR+NLGWPYEPFHVP+DVKKHWSRH  +GA+LE+EWN                  SI +G+LP GWEKALPTYTPE+P +ATRNLSQ  LNALAK        SADLASSNMTLL   GDFQ
Sbjct:   42 HISIDGDTDIAFTEDVDKRFEALGWHVIWVKNGNNGYDKIRAAIKEAQAVKDKPTMIKITTTIGFGSPNKSNSYSVHGSALGAKEVEATRQNLGWPYEPFHVPDDVKKHWSRHTPQGASLESEWNAKFAEYEKKYPEEAAELKSIITGELPLGWEKALPTYTPENPGDATRNLSQQNLNALAKVLPGLLGGSADLASSNMTLLKSSGDFQ 251          
BLAST of CK932835 vs. ExPASy Swiss-Prot
Match: TKTC_MAIZE (Transketolase, chloroplastic OS=Zea mays PE=1 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 1.118e-85
Identity = 155/210 (73.81%), Postives = 164/210 (78.10%), Query Frame = 2
Query:    2 HISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVAEGATLEAEWNXXXXXXXXXXXXXXXXXXSISSGQLPAGWEKALPTYTPESPAEATRNLSQTCLNALAKTXXXXXXXSADLASSNMTLLXXFGDFQ 631
            HISIDGDTEIAFTE+V  RFE LGWH IWVKNGNTGYDDIRAAIKEAKAVTDKPTLI+VTTTIGFGSPNKANSYSVHGSALGAKEV+ATR+NLGWPY+ F VPEDVK HWSRH  EGA LEA+WN                  SI +G+LP GW  ALP YTPESP +ATRNLSQ CLNALA         SADLASSNMTLL  FGDFQ
Sbjct:  199 HISIDGDTEIAFTEDVSTRFEALGWHTIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIKVTTTIGFGSPNKANSYSVHGSALGAKEVEATRQNLGWPYDTFFVPEDVKSHWSRHTPEGAALEADWNAKFAEYEKKYADDAATLKSIITGELPTGWVDALPKYTPESPGDATRNLSQQCLNALANVVPGLIGGSADLASSNMTLLKMFGDFQ 408          
BLAST of CK932835 vs. ExPASy Swiss-Prot
Match: TKTA_CRAPL (Transketolase 10 OS=Craterostigma plantagineum GN=TKT10 PE=2 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 1.978e-74
Identity = 134/210 (63.81%), Postives = 154/210 (73.33%), Query Frame = 2
Query:    2 HISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVAEGATLEAEWNXXXXXXXXXXXXXXXXXXSISSGQLPAGWEKALPTYTPESPAEATRNLSQTCLNALAKTXXXXXXXSADLASSNMTLLXXFGDFQ 631
            HI+IDGDT++AFTE+V KRFE LGWHV+ V NGN GYD+IR AIK AK+VTDKPTLI+V TTIGFGSPNKAN+Y VHG+ALG KE +ATR+NLGWPYE FHVP+DVKKHWSRH++EGA LE+ WN                  SI +G+LP GWEKALPTYTPESP   TR LS   LNA+A         SADL +SNM  L   GDFQ
Sbjct:  201 HITIDGDTDLAFTEDVGKRFEALGWHVLTVANGNDGYDEIREAIKVAKSVTDKPTLIKVATTIGFGSPNKANTYGVHGNALGPKEAEATRQNLGWPYETFHVPDDVKKHWSRHISEGAELESAWNAKFAEYEKKYPKEAAELKSIITGELPLGWEKALPTYTPESPGNPTRTLSHQNLNAVAAVLPGLIGGSADLTASNMAFLKSSGDFQ 410          
BLAST of CK932835 vs. ExPASy Swiss-Prot
Match: TKT7_CRAPL (Transketolase 7 OS=Craterostigma plantagineum GN=TKT7 PE=2 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 1.282e-73
Identity = 129/210 (61.43%), Postives = 152/210 (72.38%), Query Frame = 2
Query:    2 HISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVAEGATLEAEWNXXXXXXXXXXXXXXXXXXSISSGQLPAGWEKALPTYTPESPAEATRNLSQTCLNALAKTXXXXXXXSADLASSNMTLLXXFGDFQ 631
            HI+IDGDT++AFTE+VDKRF+ LGWHVIWVKNGN G D+IRAAI+EAK+V D+PT+I+VTTTIG+G+P+KAN+Y VHG+ALG KE +ATRKNLGWPYEPFHVP+DVKKHWSRH+AEGA LE+ WN                  SI +G+LP  WE   PTYTPE+P   TR LS   LN L          SADL  SNM  L   GDFQ
Sbjct:  197 HITIDGDTDVAFTEDVDKRFDALGWHVIWVKNGNDGCDEIRAAIEEAKSVKDRPTMIKVTTTIGYGAPSKANTYGVHGNALGPKEAEATRKNLGWPYEPFHVPDDVKKHWSRHIAEGAALESAWNAKFAEFQKKFPEEAADLKSIITGELPTNWESIFPTYTPENPGLPTRTLSHQILNGLGDVLPGLLGGSADLTLSNMAFLKNSGDFQ 406          
BLAST of CK932835 vs. ExPASy Swiss-Prot
Match: TKT_ANASP (Transketolase OS=Anabaena sp. (strain PCC 7120) GN=tkt PE=1 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 5.413e-56
Identity = 110/210 (52.38%), Postives = 135/210 (64.29%), Query Frame = 2
Query:    2 HISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVAEGATLEAEWNXXXXXXXXXXXXXXXXXXSISSGQLPAGWEKALPTYTPESPAEATRNLSQTCLNALAKTXXXXXXXSADLASSNMTLLXXFGDFQ 631
            HISIDG T++AFTE+V KRFE  GWHVI VK+GNT  + I  AI+EAKAVTDKPT+I+VTT IG+GSPNK+N+  VHG+ALG  EV  TR+NLGW ++PF VPEDV  +  + V  GA  E++WN                     SG+L  GW+K LP+YTPE     TR  S+TCLN LA         SADL  SN+T +   GDFQ
Sbjct:  192 HISIDGSTDVAFTEDVSKRFESYGWHVIHVKDGNTDLEAIHKAIEEAKAVTDKPTMIKVTTIIGYGSPNKSNTAGVHGAALGGDEVALTRQNLGWSHDPFVVPEDVLNYTRKAVERGAGYESDWNKTYADYKAKYPQEAAEFERYLSGKLADGWDKVLPSYTPEDKGLPTRKHSETCLNKLAAVLPELIGGSADLTHSNLTEIKGKGDFQ 401          
BLAST of CK932835 vs. ExPASy Swiss-Prot
Match: TKT_PICST (Transketolase OS=Pichia stipitis GN=TKT PE=3 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 5.627e-37
Identity = 86/210 (40.95%), Postives = 117/210 (55.71%), Query Frame = 2
Query:    5 ISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGW-PYEPFHVPEDVKKHWSRHVAEGATLEAEWNXXXXXXXXXXXXXXXXXXSISSGQLPAGWEKALPTYTPESPAEATRNLSQTCLNALAKTXXXXXXXSADLASSNMTLLXXFGDFQ 631
            ISIDG TE+AFTE+V  R++  GWH++ V + +T    I AAI EAK VT+KPTL+R+TTTIGFGS  +  ++ VHG+ L A ++   +   G+ P E F VP +V   ++ HVAE   ++ +WN                      G+LP  W+KALP YTP   A ATR LS+  L+ +          SADL  SN+T      DFQ
Sbjct:  187 ISIDGSTEVAFTEDVIARYKSYGWHIVEVSDADTDITAIAAAIDEAKKVTNKPTLVRLTTTIGFGSLAQ-GTHGVHGAPLKADDIKQLKTKWGFNPEESFAVPAEVTASYNEHVAENQKIQQQWNELFAAYKQKYPELGAELQRRLDGKLPENWDKALPVYTPADAAVATRKLSEIVLSKIIPEVPEIIGGSADLTPSNLTKAKGTVDFQ 395          
BLAST of CK932835 vs. ExPASy Swiss-Prot
Match: TKT1_CANAL (Transketolase 1 OS=Candida albicans GN=TKT1 PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 9.598e-37
Identity = 85/210 (40.48%), Postives = 117/210 (55.71%), Query Frame = 2
Query:    5 ISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYE-PFHVPEDVKKHWSRHVAEGATLEAEWNXXXXXXXXXXXXXXXXXXSISSGQLPAGWEKALPTYTPESPAEATRNLSQTCLNALAKTXXXXXXXSADLASSNMTLLXXFGDFQ 631
            ISIDGDT ++FTENV  R+   GW+V+ V + NT  + I AA+ EAK  TDKPTLIR+ TTIG+GS  K  S+ VHGS L   ++   +K+ G+  +  F +PE+V ++ ++HV+E   ++ EW                       G+LP GW++ LP YTP     ATR LS+  +NAL          SADL  SN+T      DFQ
Sbjct:  187 ISIDGDTAVSFTENVPDRYRAYGWNVLEVPDANTNIEAIAAAVDEAKKSTDKPTLIRLVTTIGYGS-LKQGSHDVHGSPLKPDDIKQLKKSWGFKEDVDFFIPEEVSEYLAKHVSENQKVQKEWEAKLAEYKKKYPTEGAEIQRRLDGKLPEGWKEYLPKYTPADKPLATRKLSENVINALHGKIPEFIGGSADLTGSNLTRAEGSVDFQ 395          
BLAST of CK932835 vs. ExPASy Swiss-Prot
Match: TKT_BACHD (Transketolase OS=Bacillus halodurans GN=tkt PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 3.647e-36
Identity = 88/209 (42.11%), Postives = 117/209 (55.98%), Query Frame = 2
Query:    5 ISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYE-PFHVPEDVKKHWSRHVAEGATLEAEWNXXXXXXXXXXXXXXXXXXSISSGQLPAGWEKALPTYTPESPAEATRNLSQTCLNALAKTXXXXXXXSADLASSNMTLLXXFGDF 628
            IS+DGD   +F+E+V+ RF+  GWHV+ V++GN   D+I  AI+EAKA  ++P+LI V TTIGFGSPNK      HG+ LGA EV  T++   W YE  FH+PE+V  ++ +   +GA  E  WN                      G LP GW+   P+Y     + ATR+ S   LNA AKT       SADLASSN TL+    +F
Sbjct:  189 ISLDGDLHHSFSESVEDRFKAYGWHVVRVEDGNN-LDEIAKAIEEAKA-DERPSLIEVKTTIGFGSPNKGGKSVSHGAPLGADEVKLTKEAYEWTYENEFHIPEEVAAYYEQVKQQGAEKEESWNELFAQYKKAYPELASQFELAVHGDLPEGWDAVAPSY-EVGKSVATRSSSGEALNAFAKTVPQLFGGSADLASSNKTLIKGEANF 394          
The following BLAST results are available for this feature:
BLAST of CK932835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
TKTC_SPIOL1.276e-8975.24Transketolase, chloroplastic OS=Spinacia oleracea ... [more]
TKTC_SOLTU1.081e-8876.19Transketolase, chloroplastic OS=Solanum tuberosum ... [more]
TKTC_CRAPL2.943e-8672.86Transketolase, chloroplastic (Fragment) OS=Cratero... [more]
TKTC_MAIZE1.118e-8573.81Transketolase, chloroplastic OS=Zea mays PE=1 SV=1[more]
TKTA_CRAPL1.978e-7463.81Transketolase 10 OS=Craterostigma plantagineum GN=... [more]
TKT7_CRAPL1.282e-7361.43Transketolase 7 OS=Craterostigma plantagineum GN=T... [more]
TKT_ANASP5.413e-5652.38Transketolase OS=Anabaena sp. (strain PCC 7120) GN... [more]
TKT_PICST5.627e-3740.95Transketolase OS=Pichia stipitis GN=TKT PE=3 SV=2[more]
TKT1_CANAL9.598e-3740.48Transketolase 1 OS=Candida albicans GN=TKT1 PE=3 S... [more]
TKT_BACHD3.647e-3642.11Transketolase OS=Bacillus halodurans GN=tkt PE=3 S... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004350_H03 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IVF_H03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932835 ID=CK932835; Name=CK932835; organism=Citrus sinensis; type=EST; length=632bp
TCACATCTCTATTGATGGAGACACGGAGATTGCCTTTACGGAGAACGTTG
ACAAGCGTTTTGAAGGTCTTGGCTGGCATGTTATCTGGGTGAAGAATGGA
AACACTGGCTATGATGATATTCGTGCTGCTATTAAGGAAGCAAAGGCTGT
CACAGATAAACCCACTTTGATTAGGGTGACTACAACCATTGGCTTTGGGT
CTCCAAACAAAGCCAACAGCTACAGTGTACATGGAAGTGCGCTGGGTGCC
AAGGAAGTAGATGCTACTAGAAAGAATCTTGGATGGCCATACGAGCCTTT
CCATGTGCCAGAAGATGTTAAAAAGCACTGGAGTCGCCATGTTGCTGAGG
GCGCCACTCTTGAAGCTGAGTGGAATGCCAAGTTTGCTGAGTATGAGAAA
AAATACCCTGAAGAAGCTGCAGAGTTTAAGTCTATCAGCAGTGGTCAATT
ACCTGCTGGTTGGGAGAAAGCCCTTCCGACATACACTCCAGAGAGCCCAG
CGGAAGCTACCAGAAATTTATCTCAGACATGTCTTAATGCCCTTGCAAAG
ACTCTCCNNGGTCTTCTTGGTGGTAGTGCAGACCTTGCTTCTTCCAACAT
GACCCTACTAAANNNGTTTGGGGACTTCCAAA
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