CK932838

Overview
NameCK932838
Unique NameCK932838
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1491 contig Csv1_Contig1491:1..809. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK932838 vs. ExPASy Swiss-Prot
Match: DOF33_ARATH (Dof zinc finger protein DOF3.3 OS=Arabidopsis thaliana GN=DOF3.3 PE=1 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 6.670e-45
Identity = 104/234 (44.44%), Postives = 127/234 (54.27%), Query Frame = 2
Query:  116 MAEPKDQGIKLFGRTIPLPEVTPSVGAAPFVDDRIDQDPTCSTNSSRES---DKSRDGEERDSEKEMSVDKPVETKQEDEAPPENSEESTNPGSTSGISENPKASPVXXXXXXXXXXXXXXXXXXXXXXXXXXLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSASHYRHITVSEALQNVRTDVPNGVHHPALKTNGTVLTF 808
            M E +D  IKLFG  IP P V  S   A  V+D  + D +   + S E    + S       ++   +  KP    +E+    +  E S  P       +N + +P                           LKKP KILPCPRC SM+TKFCYYNNYN+NQPRHFCK CQRYWTAGGTMRNVPVGAGRRKNK+S+SHYRHIT+SEAL+  R D       P L+ N  VL+F
Sbjct:    2 MMETRDPAIKLFGMKIPFPSVFES---AVTVEDDEEDDWSGGDDKSPEKVTPELSDKNNNNCNDNSFNNSKPETLDKEEATSTDQIESSDTP------EDNQQTTP-----------------------DGKTLKKPTKILPCPRCKSMETKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKSSSSHYRHITISEALEAARLD-------PGLQANTRVLSF 196          
BLAST of CK932838 vs. ExPASy Swiss-Prot
Match: DOF52_ARATH (Dof zinc finger protein DOF5.2 OS=Arabidopsis thaliana GN=DOF5.2 PE=1 SV=2)

HSP 1 Score: 175.637 bits (444), Expect = 2.803e-43
Identity = 109/231 (47.19%), Postives = 127/231 (54.98%), Query Frame = 2
Query:  131 DQGIKLFGRTIPLPE---VTPSVGAAPFVDD-----RIDQDPTCSTNSSRESDKSRDGEERDSEK----EMSVDKPVETKQEDEAPPENSEESTNPGSTSGISENPKASPVXXXXXXXXXXXXXXXXXXXXXXXXXXLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSASHY-RH--ITVSEALQNV-RTDV--PNGVH 769
            D  IKLFG+TIPLPE   V  S     F+ +     R+    T   +     D     EE D       E   DK  E   E +     +E +    +TSGI+E  + +                            LKKPDKILPCPRCNSM+TKFCYYNNYNVNQPRHFCK CQRYWTAGGTMRNVPVGAGRRKNK+ ASHY RH  IT +EA+Q V RTD+  PNG +
Sbjct:    3 DPAIKLFGKTIPLPELGVVDSSSSYTGFLTETQIPVRLSDSCTGDDDDEEMGDSGLGREEGDDVGDGGGESETDKKEEKDSECQEESLRNESNDVTTTTSGITEKTETTKAAKTNEESGGTACSQEGK---------LKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAGRRKNKSPASHYNRHVSITSAEAMQKVARTDLQHPNGAN 224          
BLAST of CK932838 vs. ExPASy Swiss-Prot
Match: DOF55_ARATH (Dof zinc finger protein DOF5.5 OS=Arabidopsis thaliana GN=DOF5.5 PE=1 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 3.669e-35
Identity = 69/103 (66.99%), Postives = 78/103 (75.73%), Query Frame = 2
Query:  506 LKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSA--SHYRHITVSEALQNVRTDVPNGVHHPALKTNGTVLTF 808
            LKKP KILPCPRCNSM+TKFCYYNNYNVNQPRHFCK CQRYWT+GGTMR+VP+GAGRRKNKN++  SHY H+T+SE                   TNG VL+F
Sbjct:   47 LKKPTKILPCPRCNSMETKFCYYNNYNVNQPRHFCKACQRYWTSGGTMRSVPIGAGRRKNKNNSPTSHYHHVTISE-------------------TNGPVLSF 130          
BLAST of CK932838 vs. ExPASy Swiss-Prot
Match: DOF1A_ARATH (Dof zinc finger protein DOF1.10 OS=Arabidopsis thaliana GN=DOF1.10 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.857e-33
Identity = 89/221 (40.27%), Postives = 113/221 (51.13%), Query Frame = 2
Query:  116 MAEPKDQGIKLFGRTIPLPEVTPSVGAAPFVDDRIDQDPTCSTNSSRESDKSRDGEERDSEKEMSVDKPVETKQEDEAPPENSEESTN----PGSTSGISENPKA-----SP--VXXXXXXXXXXXXXXXXXXXXXXXXXXLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKN--SASHYRHITVSEALQN 739
            M++ +D  IKLFGRTI                  +D +    ++ S   D S D  + DS    S   P  T      P + SE+ +N    P   S ++E PKA     SP                             LKKPDK++PCPRC S +TKFCYYNNYNVNQPR+FC+NCQRYWTAGG+MRNVPVG+GRRKNK   S++HY  +T  +   N
Sbjct:    1 MSKSRDTEIKLFGRTIT---------------SLLDVNCYDPSSLSPVHDVSSDPSKEDSSSSSSSCSP--TIGPIRVPVKKSEQESNKFKDPYILSDLNEPPKAVSEISSPRSSKNNCDQQSEITTTTTTSTTSGEKSTALKKPDKLIPCPRCESANTKFCYYNNYNVNQPRYFCRNCQRYWTAGGSMRNVPVGSGRRKNKGWPSSNHYLQVTSEDCDNN 204          
BLAST of CK932838 vs. ExPASy Swiss-Prot
Match: DOF13_ARATH (Dof zinc finger protein DOF1.3 OS=Arabidopsis thaliana GN=DOF1.3 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.958e-32
Identity = 84/203 (41.38%), Postives = 105/203 (51.72%), Query Frame = 2
Query:  116 MAEPKDQGIKLFGRTIPLPEVTPSVGAAPFVDDRIDQDPTCSTNSSRESDKSRDGEERDSEKEMSVDKPVETKQEDEAPPENSEESTNPGSTSGISENPKASPVXXXXXXXXXXXXXXXXXXXXXXXXXXLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKN--SASHYRHIT 718
            M++ +D  +KLFG TI     TP           +  D + S++SS  S +      +      S+        E +   ENS++  +  +T   SE  K +                            LKKPDKILPCPRCNS DTKFCYYNNYNVNQPRHFC+ CQRYWTAGG+MR VPVG+GRRKNK   S+  Y HIT
Sbjct:    1 MSQVRDTPVKLFGWTI-----TPVSHDPYSSSSHVLPDSSSSSSSSSLSLRPHMMNNQSVTDNTSLKLSSNLNNESKETSENSDDQHSEITTI-TSEEEKTTE---------------------------LKKPDKILPCPRCNSADTKFCYYNNYNVNQPRHFCRKCQRYWTAGGSMRIVPVGSGRRKNKGWVSSDQYLHIT 170          
BLAST of CK932838 vs. ExPASy Swiss-Prot
Match: DOF15_ARATH (Dof zinc finger protein DOF1.5 OS=Arabidopsis thaliana GN=DOF1.5 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.493e-28
Identity = 51/60 (85.00%), Postives = 57/60 (95.00%), Query Frame = 2
Query:  509 KKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNK 688
            K+PDKI+PCPRC SM+TKFCY+NNYNVNQPRHFCK CQRYWTAGG +RNVPVGAGRRK+K
Sbjct:   56 KRPDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKSK 115          
BLAST of CK932838 vs. ExPASy Swiss-Prot
Match: DOF23_ARATH (Dof zinc finger protein DOF2.3 OS=Arabidopsis thaliana GN=DOF2.3 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.803e-27
Identity = 49/60 (81.67%), Postives = 55/60 (91.67%), Query Frame = 2
Query:  509 KKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNK 688
            K+PDKI+ CPRC SM+TKFCY+NNYNVNQPRHFCK C RYWTAGG +RNVPVGAGRRK+K
Sbjct:   52 KRPDKIIACPRCKSMETKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNVPVGAGRRKSK 111          
BLAST of CK932838 vs. ExPASy Swiss-Prot
Match: DOF18_ARATH (Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana GN=DOF1.8 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.889e-23
Identity = 43/62 (69.35%), Postives = 56/62 (90.32%), Query Frame = 2
Query:  518 DKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSASH 703
            D+ L CPRCNS++TKFCYYNNY++ QPR+FCK+C+RYWTAGG++RN+PVG G RKNK S+S+
Sbjct:   46 DQALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGSLRNIPVGGGVRKNKRSSSN 107          
BLAST of CK932838 vs. ExPASy Swiss-Prot
Match: DOF25_ARATH (Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana GN=DOF2.5 PE=2 SV=3)

HSP 1 Score: 108.227 bits (269), Expect = 5.495e-23
Identity = 49/93 (52.69%), Postives = 67/93 (72.04%), Query Frame = 2
Query:  512 KPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSASHYRHITVSEALQNVRTDVPNGVHHPALKTN 790
            +P + L CPRCNS +TKFCYYNNY++ QPR+FCK C+RYWT GG++RNVPVG   RKNK S+S     + S  LQ + + +P+ ++ P L +N
Sbjct:   75 RPQEKLNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKNKRSSSS----SSSNILQTIPSSLPD-LNPPILFSN 162          
BLAST of CK932838 vs. ExPASy Swiss-Prot
Match: MNB1A_MAIZE (Dof zinc finger protein MNB1A OS=Zea mays GN=MNB1A PE=1 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.224e-22
Identity = 43/57 (75.44%), Postives = 48/57 (84.21%), Query Frame = 2
Query:  530 PCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSAS 700
            PCPRC S DTKFCYYNNYN +QPRHFCK C+RYWT GGT+RNVPVG G RK  +S+S
Sbjct:   48 PCPRCASRDTKFCYYNNYNTSQPRHFCKGCRRYWTKGGTLRNVPVGGGTRKKPSSSS 104          
The following BLAST results are available for this feature:
BLAST of CK932838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
DOF33_ARATH6.670e-4544.44Dof zinc finger protein DOF3.3 OS=Arabidopsis thal... [more]
DOF52_ARATH2.803e-4347.19Dof zinc finger protein DOF5.2 OS=Arabidopsis thal... [more]
DOF55_ARATH3.669e-3566.99Dof zinc finger protein DOF5.5 OS=Arabidopsis thal... [more]
DOF1A_ARATH5.857e-3340.27Dof zinc finger protein DOF1.10 OS=Arabidopsis tha... [more]
DOF13_ARATH4.958e-3241.38Dof zinc finger protein DOF1.3 OS=Arabidopsis thal... [more]
DOF15_ARATH1.493e-2885.00Dof zinc finger protein DOF1.5 OS=Arabidopsis thal... [more]
DOF23_ARATH4.803e-2781.67Dof zinc finger protein DOF2.3 OS=Arabidopsis thal... [more]
DOF18_ARATH1.889e-2369.35Dof zinc finger protein DOF1.8 OS=Arabidopsis thal... [more]
DOF25_ARATH5.495e-2352.69Dof zinc finger protein DOF2.5 OS=Arabidopsis thal... [more]
MNB1A_MAIZE1.224e-2275.44Dof zinc finger protein MNB1A OS=Zea mays GN=MNB1A... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004350_H06 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IVF_H06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932838 ID=CK932838; Name=CK932838; organism=Citrus sinensis; type=EST; length=809bp
GGGGCTCTCCTTACAACAGCACAAAACTTTGTTCCTCCCTCTCTCTGAGT
GCAAAGTTTTTATTTTTTGTGTTTTCAGTTTTATCTGCTTTGTACTTTGG
TTTTTATCTTTTAAAATGGCGGAGCCAAAGGATCAGGGGATCAAGCTCTT
TGGCAGAACCATACCTTTGCCTGAAGTAACTCCATCAGTCGGTGCCGCTC
CTTTTGTTGATGATAGAATCGATCAGGATCCAACTTGTTCAACAAATTCT
TCACGAGAAAGCGATAAGAGCAGAGACGGAGAAGAAAGAGACTCTGAGAA
GGAGATGTCGGTAGACAAGCCTGTTGAGACCAAACAGGAAGATGAAGCCC
CACCAGAAAATTCTGAGGAGTCCACAAATCCAGGTTCAACCTCGGGGATC
AGTGAGAACCCTAAAGCATCGCCTGTTGAAAAGGAGTGCACTACAGTGAA
GACTTCAAAGACAGAAGAAGAGCAGAGCGAACCTAGTACTTCACAAGAAA
AGACCTTGAAGAAACCTGACAAGATTCTTCCATGCCCACGTTGTAATAGT
ATGGACACTAAGTTCTGCTACTACAACAATTACAATGTAAACCAACCACG
ACACTTCTGCAAGAACTGCCAGAGATACTGGACAGCTGGTGGGACAATGC
GTAATGTACCTGTAGGTGCTGGTCGTCGAAAGAACAAGAACTCAGCTTCT
CACTACCGTCACATAACTGTCTCAGAAGCTCTCCAAAATGTCCGAACTGA
TGTTCCGAATGGGGTCCACCATCCTGCGTTGAAAACTAATGGTACTGTAC
TTACCTTTG
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