CK932840
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK932840 vs. ExPASy Swiss-Prot
Match: RK31_ARATH (50S ribosomal protein L31, chloroplastic OS=Arabidopsis thaliana GN=RPL31 PE=1 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.357e-41 Identity = 82/127 (64.57%), Postives = 95/127 (74.80%), Query Frame = 2 Query: 8 PNTFFQIKXSAPILPTRKVKNCAATGSGYRTR-------VVTCRKKDIHPQFYEDAKVYCNGELVMATGGTQKEYVVDVWSGNHAFYLGGHSAVVVDADQVEKFRQKFGGLSEIMEIPVLKGEIVLP 367 PN+F QI P L RK A G R +TCRKK++HP+F+EDAKVYCNGELVM TGGT+KEYVVDVWSGNH FYLG SA++VDADQVEKFR++F GLSEIMEIPVLKGEI++P Sbjct: 6 PNSFLQISPCVPSLQLRKPVMAAVKGGKQSVRRSSNTVVQITCRKKELHPEFHEDAKVYCNGELVMTTGGTKKEYVVDVWSGNHPFYLGNRSALMVDADQVEKFRKRFAGLSEIMEIPVLKGEIIMP 132
BLAST of CK932840 vs. ExPASy Swiss-Prot
Match: RL31_SYNP6 (50S ribosomal protein L31 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rpmE PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.288e-15 Identity = 38/67 (56.72%), Postives = 46/67 (68.66%), Query Frame = 2 Query: 119 KKDIHPQFYEDAKVYCNGELVMATGGTQKEYVVDVWSGNHAFYLGGHSAVVVDADQVEKFRQKFGGL 319 K DIHPQ+Y +AKVYCNGE VM G TQ E VDVWSGNH FY G + + +VE+F +K+G L Sbjct: 3 KADIHPQWYPEAKVYCNGEEVMTVGSTQPELHVDVWSGNHPFYTGTQKIIDTEG-RVERFLRKYGML 68
BLAST of CK932840 vs. ExPASy Swiss-Prot
Match: RL31_SYNE7 (50S ribosomal protein L31 OS=Synechococcus elongatus (strain PCC 7942) GN=rpmE PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.288e-15 Identity = 38/67 (56.72%), Postives = 46/67 (68.66%), Query Frame = 2 Query: 119 KKDIHPQFYEDAKVYCNGELVMATGGTQKEYVVDVWSGNHAFYLGGHSAVVVDADQVEKFRQKFGGL 319 K DIHPQ+Y +AKVYCNGE VM G TQ E VDVWSGNH FY G + + +VE+F +K+G L Sbjct: 3 KADIHPQWYPEAKVYCNGEEVMTVGSTQPELHVDVWSGNHPFYTGTQKIIDTEG-RVERFLRKYGML 68
BLAST of CK932840 vs. ExPASy Swiss-Prot
Match: RL31_PROMA (50S ribosomal protein L31 OS=Prochlorococcus marinus GN=rpmE PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.846e-14 Identity = 36/65 (55.38%), Postives = 46/65 (70.77%), Query Frame = 2 Query: 119 KKDIHPQFYEDAKVYCNGELVMATGGTQKEYVVDVWSGNHAFYLGGHSAVVVDADQVEKFRQKFG 313 KKDIHP +Y DAKV CNGE+VM TG TQ E VDVWSGNH F+ G + + +V++F +K+G Sbjct: 3 KKDIHPNWYPDAKVICNGEVVMTTGSTQPEIHVDVWSGNHPFFTGTQKILDTEG-RVDRFMRKYG 66
BLAST of CK932840 vs. ExPASy Swiss-Prot
Match: RL31_THEEB (50S ribosomal protein L31 OS=Thermosynechococcus elongatus (strain BP-1) GN=rpmE PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.149e-14 Identity = 35/67 (52.24%), Postives = 51/67 (76.12%), Query Frame = 2 Query: 119 KKDIHPQFYEDAKVYCNGELVMATGGTQKEYVVDVWSGNHAFYLGGHSAVVVDAD-QVEKFRQKFGG 316 K +IHPQ+Y +AKVYC+GE++M G T+ E VD+WSGNH F+ G + +VDA+ +VE+FR+K+ G Sbjct: 3 KPNIHPQWYPEAKVYCDGEVIMTVGSTKPELHVDIWSGNHPFFTG--TQKIVDAEGRVERFRRKYSG 67
BLAST of CK932840 vs. ExPASy Swiss-Prot
Match: RL31_NOSP7 (50S ribosomal protein L31 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=rpmE PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.149e-14 Identity = 35/65 (53.85%), Postives = 46/65 (70.77%), Query Frame = 2 Query: 119 KKDIHPQFYEDAKVYCNGELVMATGGTQKEYVVDVWSGNHAFYLGGHSAVVVDADQVEKFRQKFG 313 K DIHP++Y DAKVYCNG++VM G T+ E VDVWSGNH FY G + + +VE+F +K+G Sbjct: 3 KADIHPKWYPDAKVYCNGQVVMTIGSTKPELHVDVWSGNHPFYTGTQKIIDTEG-RVERFLRKYG 66
BLAST of CK932840 vs. ExPASy Swiss-Prot
Match: RL31_SYNJB (50S ribosomal protein L31 OS=Synechococcus sp. GN=rpmE PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.372e-14 Identity = 36/66 (54.55%), Postives = 49/66 (74.24%), Query Frame = 2 Query: 119 KKDIHPQFYEDAKVYCNGELVMATGGTQKEYVVDVWSGNHAFYLGGHSAVVVDAD-QVEKFRQKFG 313 KK +HPQ+Y +AKV CNGE+VM G T+ E VDVWSGNH F+ G S ++D++ +VEKF +K+G Sbjct: 3 KKGLHPQWYPEAKVICNGEVVMTVGSTKPELKVDVWSGNHPFFTG--SQKIIDSEGRVEKFMRKYG 66
BLAST of CK932840 vs. ExPASy Swiss-Prot
Match: RL31_ANAVT (50S ribosomal protein L31 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=rpmE PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.372e-14 Identity = 34/65 (52.31%), Postives = 46/65 (70.77%), Query Frame = 2 Query: 119 KKDIHPQFYEDAKVYCNGELVMATGGTQKEYVVDVWSGNHAFYLGGHSAVVVDADQVEKFRQKFG 313 K DIHP++Y +AKVYCNG++VM G T+ E VDVWSGNH FY G + + +VE+F +K+G Sbjct: 3 KSDIHPKWYPEAKVYCNGQVVMTVGSTKPELHVDVWSGNHPFYTGTQKIIDTEG-RVERFLRKYG 66
BLAST of CK932840 vs. ExPASy Swiss-Prot
Match: RL31_ANASP (50S ribosomal protein L31 OS=Anabaena sp. (strain PCC 7120) GN=rpmE PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.372e-14 Identity = 34/65 (52.31%), Postives = 46/65 (70.77%), Query Frame = 2 Query: 119 KKDIHPQFYEDAKVYCNGELVMATGGTQKEYVVDVWSGNHAFYLGGHSAVVVDADQVEKFRQKFG 313 K DIHP++Y +AKVYCNG++VM G T+ E VDVWSGNH FY G + + +VE+F +K+G Sbjct: 3 KSDIHPKWYPEAKVYCNGQVVMTVGSTKPELHVDVWSGNHPFYTGTQKIIDTEG-RVERFLRKYG 66
BLAST of CK932840 vs. ExPASy Swiss-Prot
Match: RL31_ACAM1 (50S ribosomal protein L31 OS=Acaryochloris marina (strain MBIC 11017) GN=rpmE PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.372e-14 Identity = 34/65 (52.31%), Postives = 47/65 (72.31%), Query Frame = 2 Query: 119 KKDIHPQFYEDAKVYCNGELVMATGGTQKEYVVDVWSGNHAFYLGGHSAVVVDADQVEKFRQKFG 313 K DIHP++Y +AKVYC+GE+VM G TQ+E VDVWSGNH F+ G + + +VE+F +K+G Sbjct: 3 KPDIHPKWYPEAKVYCDGEVVMTVGSTQEELHVDVWSGNHPFFTGTQKIIDTEG-RVERFMRKYG 66 The following BLAST results are available for this feature:
BLAST of CK932840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932840 ID=CK932840; Name=CK932840; organism=Citrus sinensis; type=EST; length=566bpback to top |