CK932843

Overview
NameCK932843
Unique NameCK932843
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length539
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13382 contig Csv1_Contig13382:3..541. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK932843 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 5.769e-36
Identity = 74/93 (79.57%), Postives = 81/93 (87.10%), Query Frame = 2
Query:    5 NGXXKSVLYRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDCMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIATV 283
            NG  KSVL+RV+AQT+G RMSIASFYNPG+DAVIYPAPALVEKE    +VYPKFVF+D MKLYA LKFQAKEPRFEAMK +E  VNLGPIATV
Sbjct:  226 NGKYKSVLHRVVAQTDGTRMSIASFYNPGNDAVIYPAPALVEKEVEEKEVYPKFVFDDYMKLYAALKFQAKEPRFEAMKAVEANVNLGPIATV 318          
BLAST of CK932843 vs. ExPASy Swiss-Prot
Match: ACCO_ACTDE (1-aminocyclopropane-1-carboxylate oxidase OS=Actinidia deliciosa GN=ACO PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 5.769e-36
Identity = 76/94 (80.85%), Postives = 82/94 (87.23%), Query Frame = 2
Query:    5 NGXXKSVLYRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEA-VNSQVYPKFVFEDCMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIATV 283
            NG  KSV++RVIAQ +GNRMSIASFYNPGSDAV+YPAPALV+KE     QVYPKFVFED MKLYAGLKFQAKEPRFEAMK ME  VNLGPIAT+
Sbjct:  226 NGKYKSVMHRVIAQPDGNRMSIASFYNPGSDAVMYPAPALVDKEEDQQKQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKAMENAVNLGPIATI 319          
BLAST of CK932843 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 3.739e-35
Identity = 76/94 (80.85%), Postives = 82/94 (87.23%), Query Frame = 2
Query:    5 NGXXKSVLYRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAV-NSQVYPKFVFEDCMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIATV 283
            NG  KSV++RVIAQ +G RMS+ASFYNPGSDAVIYPAPALVEKEA  N QVYPKFVF+D MKLYAGLKFQAKEPRFEAMK MET V + PIATV
Sbjct:  226 NGKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKAMETDVKMDPIATV 319          
BLAST of CK932843 vs. ExPASy Swiss-Prot
Match: ACCO3_CUCME (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Cucumis melo GN=ACO3 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 7.052e-34
Identity = 72/94 (76.60%), Postives = 82/94 (87.23%), Query Frame = 2
Query:    5 NGXXKSVLYRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDCMKLYAGLKFQAKEPRFEAMKNME-TIVNLGPIATV 283
            NG  KSV++RVIAQ +GNRMSIASFYNPG+DAVIYPAPALVE E   +++YPKFVF+D MKLY GLKFQAKEPRFEAMK ME T +N+GPIATV
Sbjct:  227 NGKYKSVMHRVIAQEDGNRMSIASFYNPGNDAVIYPAPALVEGEQEKTKLYPKFVFDDYMKLYVGLKFQAKEPRFEAMKAMESTNLNMGPIATV 320          
BLAST of CK932843 vs. ExPASy Swiss-Prot
Match: ACCO_PRUMU (1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 3.500e-33
Identity = 73/93 (78.49%), Postives = 80/93 (86.02%), Query Frame = 2
Query:    5 NGXXKSVLYRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEA-VNSQVYPKFVFEDCMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIAT 280
            NG  +SV +RVIAQT+G RMSIASFYNPGSDAVIYPAP LVEKEA   +QVYPKFVFED MKLYAGLKFQ KEPRFEAMK +ET ++L PIAT
Sbjct:  226 NGKYRSVEHRVIAQTDGTRMSIASFYNPGSDAVIYPAPTLVEKEAEEKNQVYPKFVFEDYMKLYAGLKFQPKEPRFEAMKAVETNISLVPIAT 318          
BLAST of CK932843 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.018e-32
Identity = 73/94 (77.66%), Postives = 77/94 (81.91%), Query Frame = 2
Query:    5 NGXXKSVLYRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVN--SQVYPKFVFEDCMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIAT 280
            NG  KSVL+RVIAQT+G RMS+ASFYNPGSDAVIYPAP LVEKEA     QVYPKFVF+D MKLYAGLKFQAKEPRFEAMK  E  V   PIAT
Sbjct:  226 NGKYKSVLHRVIAQTDGTRMSLASFYNPGSDAVIYPAPTLVEKEADQECKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKAREADVKSDPIAT 319          
BLAST of CK932843 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.268e-32
Identity = 70/94 (74.47%), Postives = 79/94 (84.04%), Query Frame = 2
Query:    5 NGXXKSVLYRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAV-NSQVYPKFVFEDCMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIATV 283
            NG  KSV +RVIAQT+G RMS+ASFYNP SDAVIYPAPALVE++A  N Q+YPKFVF+D MKLYA LKFQAKEPRFEAMK ME  V + P+ATV
Sbjct:  226 NGKYKSVPHRVIAQTDGTRMSLASFYNPASDAVIYPAPALVERDAEENKQIYPKFVFDDYMKLYARLKFQAKEPRFEAMKAMEADVKIDPVATV 319          
BLAST of CK932843 vs. ExPASy Swiss-Prot
Match: ACCO1_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 3.276e-31
Identity = 69/84 (82.14%), Postives = 74/84 (88.10%), Query Frame = 2
Query:    5 NGXXKSVLYRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNS-QVYPKFVFEDCMKLYAGLKFQAKEPRFEAMKNMET 253
            NG  KSVL+RVIAQT+G RMS+ASFYNPGSDAVIYPA  LVEKEA  S QVYPKFVF+D MKLYAGLKFQAKEPRFEAMK ME+
Sbjct:  226 NGKYKSVLHRVIAQTDGTRMSLASFYNPGSDAVIYPAKTLVEKEAEESTQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKAMES 309          
BLAST of CK932843 vs. ExPASy Swiss-Prot
Match: ACCO_PERAE (1-aminocyclopropane-1-carboxylate oxidase OS=Persea americana GN=ACO PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 4.278e-31
Identity = 71/95 (74.74%), Postives = 79/95 (83.16%), Query Frame = 2
Query:    5 NGXXKSVLYRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEA-VNSQVYPKFVFEDCMKLYAGLKFQAKEPRFEA--MKNMETIVNLGPIAT 280
            NG  KSV++RV+AQT+GNRMS+ASFYNPGSDAVI+PAPALVEKEA    +VYPKFVFED M LYAGLKFQAKEPRFE   MK +ET  NL PI T
Sbjct:  227 NGKYKSVMHRVVAQTDGNRMSLASFYNPGSDAVIFPAPALVEKEAEEKKEVYPKFVFEDYMNLYAGLKFQAKEPRFEVMKMKAVET-ANLSPITT 320          
BLAST of CK932843 vs. ExPASy Swiss-Prot
Match: ACCO_DIACA (Probable 1-aminocyclopropane-1-carboxylate oxidase OS=Dianthus caryophyllus GN=ACO PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 5.588e-31
Identity = 69/92 (75.00%), Postives = 73/92 (79.35%), Query Frame = 2
Query:    5 NGXXKSVLYRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDCMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIAT 280
            NG  KSV++RVIAQT+GNRMSIASFYNPGSDAVIYPAP LVEKE    + YPKFVFED M LY  LKFQ KEPRFEAMK MET    GPI T
Sbjct:  232 NGKYKSVMHRVIAQTDGNRMSIASFYNPGSDAVIYPAPTLVEKEEEKCRAYPKFVFEDYMNLYLKLKFQEKEPRFEAMKAMET---TGPIPT 320          
The following BLAST results are available for this feature:
BLAST of CK932843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
ACCO_DIOKA5.769e-3679.571-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]
ACCO_ACTDE5.769e-3680.851-aminocyclopropane-1-carboxylate oxidase OS=Actin... [more]
ACCO1_PETHY3.739e-3580.851-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
ACCO3_CUCME7.052e-3476.601-aminocyclopropane-1-carboxylate oxidase 3 OS=Cuc... [more]
ACCO_PRUMU3.500e-3378.491-aminocyclopropane-1-carboxylate oxidase OS=Prunu... [more]
ACCO3_PETHY1.018e-3277.661-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
ACCO4_PETHY2.268e-3274.471-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]
ACCO1_SOLLC3.276e-3182.141-aminocyclopropane-1-carboxylate oxidase 1 OS=Sol... [more]
ACCO_PERAE4.278e-3174.741-aminocyclopropane-1-carboxylate oxidase OS=Perse... [more]
ACCO_DIACA5.588e-3175.00Probable 1-aminocyclopropane-1-carboxylate oxidase... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004350_G05 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IVF_G05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932843 ID=CK932843; Name=CK932843; organism=Citrus sinensis; type=EST; length=539bp
GGGGAATGGCAANNNCAAGAGTGTGCTATATCGCGTGATTGCTCAAACAG
AGGGTAACAGGATGTCCATAGCATCATTTTACAATCCAGGCAGTGATGCT
GTGATCTACCCGGCACCAGCATTGGTGGAGAAGGAGGCTGTGAACAGCCA
AGTTTATCCGAAATTTGTGTTCGAGGATTGCATGAAACTCTATGCTGGGC
TGAAGTTTCAGGCCAAGGAGCCAAGGTTTGAAGCCATGAAGAACATGGAG
ACCATTGTGAATCTGGGTCCTATTGCAACTGTTTGAGTTCCCCTATGGCT
CTTTGGTGTTAGAGCTGAGTTGTTTGTGTTGGCTAGTGTGGAACATATAT
AGTTTTTAAAATAAGCCGAAAGCTCGGACTGATCATAGTTCTTGTGGAGT
CAAAGTCGACGGTGGTTGTGGTGTTTCAGGTATTTATTGTAGAAAGTGAC
CAAATGGAATACTGTATTCCTCCTGTTTCATATGAAATTATATAAGATTA
TATTTGGCCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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