CK932855

Overview
NameCK932855
Unique NameCK932855
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length841
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK932855_ssr283 microsatellite CK932855_ssr283:283..292. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CK932855 vs. ExPASy Swiss-Prot
Match: BEH2_ARATH (BES1/BZR1 homolog protein 2 OS=Arabidopsis thaliana GN=BEH2 PE=1 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.861e-45
Identity = 102/195 (52.31%), Postives = 118/195 (60.51%), Query Frame = 1
Query:  265 RLPTWXXXXXXXXXXXXXXXXXXXXFSGLRAEGNFKLPKHCDNNEVLKALCAEAGWIVEEDGTTYRKGSRPPRTPSEITGGSANISTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRFEGNPSNY-ILPFLQNIA-SVPTNLPRLRISNSAPVTPPLSSPTSRGPKRKTDWESISN-GTLSSFRHPLFAVS 840
            R PTW                    +SGLRA+GN+KLPKHCDNNEVLKALC EAGWIVE+DGTTYRKG +PP   S+I+G   N ST                                +R++GNPS+Y +LPFL NIA S+P NLP LRISNSAPVTPPLSSPTSRG KRK   E + N G+L   RHPLFA+S
Sbjct:   16 RTPTWKERENNKKRERRRRAITAKIYSGLRAQGNYKLPKHCDNNEVLKALCLEAGWIVEDDGTTYRKGFKPP--ASDISGTPTNFSTNSSIQPSPQSSAFPSPAPSYHGSPVSSSFPSPSRYDGNPSSYLLLPFLHNIASSIPANLPPLRISNSAPVTPPLSSPTSRGSKRKLTSEQLPNGGSLHVLRHPLFAIS 208          
BLAST of CK932855 vs. ExPASy Swiss-Prot
Match: BZR1_ARATH (Protein BRASSINAZOLE-RESISTANT 1 OS=Arabidopsis thaliana GN=BZR1 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 8.667e-35
Identity = 83/201 (41.29%), Postives = 109/201 (54.23%), Query Frame = 1
Query:  265 RLPTWXXXXXXXXXXXXXXXXXXXXFSGLRAEGNFKLPKHCDNNEVLKALCAEAGWIVEEDGTTYRKGSRPPRTPSEITGGSANISTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRFE--GNPSNYILPFLQNIASVPTNLPRLRISNSAPVTPPLSSPTSRGPKRKTDWES-------ISNGTLSSFRHPLFAVS 840
            R P+W                    ++GLRA+G++ LPKHCDNNEVLKALC EAGW+VEEDGTTYRKG +P   P EI G S+ ++                                 +R E   N S+   PFL+N   +P++LP LRISNS PVTPP+SSPTS+ PK   +WES       I+  +++SF +P +AVS
Sbjct:   23 RKPSWRERENNRRRERRRRAVAAKIYTGLRAQGDYNLPKHCDNNEVLKALCVEAGWVVEEDGTTYRKGCKP--LPGEIAGTSSRVTPYSSQNQSPLSSAFQSPIPSYQVSPSSSSFPSPSRGEPNNNMSSTFFPFLRN-GGIPSSLPSLRISNSCPVTPPVSSPTSKNPKPLPNWESIAKQSMAIAKQSMASFNYPFYAVS 220          
BLAST of CK932855 vs. ExPASy Swiss-Prot
Match: BZR2_ARATH (Protein BRASSINAZOLE-RESISTANT 2 OS=Arabidopsis thaliana GN=BZR2 PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 4.301e-34
Identity = 84/202 (41.58%), Postives = 108/202 (53.47%), Query Frame = 1
Query:  265 RLPTWXXXXXXXXXXXXXXXXXXXXFSGLRAEGNFKLPKHCDNNEVLKALCAEAGWIVEEDGTTYRKGSRPPRTPSEITGGSANISTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRFEGNPSNY--ILPFLQNIASVPTNLPRLRISNSAPVTPPLSSPTSRGPKRKTDWESISNGTLS--------SFRHPLFAVS 840
            R P+W                    ++GLRA+GN+ LPKHCDNNEVLKALC+EAGW+VEEDGTTYRKG +P   P ++ G S+  +                                 +R  G+P N   I PFL+N   +P++LP LRISNSAPVTPP+SSPTSR PK    WES +  ++S        S  +P +AVS
Sbjct:   22 RKPSWRERENNRRRERRRRAVAAKIYTGLRAQGNYNLPKHCDNNEVLKALCSEAGWVVEEDGTTYRKGHKP--LPGDMAGSSSRATPYSSHNQSPLSSTFDSPILSYQVSPSSSSFPSPSRV-GDPHNISTIFPFLRN-GGIPSSLPPLRISNSAPVTPPVSSPTSRNPKPLPTWESFTKQSMSMAAKQSMTSLNYPFYAVS 219          
BLAST of CK932855 vs. ExPASy Swiss-Prot
Match: BEH1_ARATH (BES1/BZR1 homolog protein 1 OS=Arabidopsis thaliana GN=BEH1 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 7.593e-31
Identity = 83/188 (44.15%), Postives = 98/188 (52.13%), Query Frame = 1
Query:  265 RLPTWXXXXXXXXXXXXXXXXXXXXFSGLRAEGNFKLPKHCDNNEVLKALCAEAGWIVEEDGTTYRKGSRPPRTPSEITGGSANISTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRFEGNPSN-YILPFLQNIASVPTNLPRLRISNSAPVTPPLSSPTSRGPKRKTDWESISNGTLSSFRHP 825
            R+PTW                    F+GLR++GN+KLPKHCDNNEVLKALC EAGWIV EDGTTYRKGSRP  T             C                               TRF+ N S+ Y++P+LQN+AS   NL  LRISNSAPVTPP+SSP    P R   W+S SN  +S+   P
Sbjct:   14 RMPTWKERENNKKRERRRRAIAAKIFTGLRSQGNYKLPKHCDNNEVLKALCLEAGWIVHEDGTTYRKGSRPTET----------TVPCSSIQLSPQSSAFQSPIPSYQASPSSSSYPSPTRFDPNQSSTYLIPYLQNLAS-SGNLAPLRISNSAPVTPPISSPRRSNP-RLPRWQS-SNFPVSAPSSP 188          
BLAST of CK932855 vs. ExPASy Swiss-Prot
Match: BEH4_ARATH (BES1/BZR1 homolog protein 4 OS=Arabidopsis thaliana GN=BEH4 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.281e-29
Identity = 78/198 (39.39%), Postives = 95/198 (47.98%), Query Frame = 1
Query:  265 RLPTWXXXXXXXXXXXXXXXXXXXXFSGLRAEGNFKLPKHCDNNEVLKALCAEAGWIVEEDGTTYRKGSRPPRTPSEITGGSANISTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRFEGNPSNYILPFLQNI-------ASVPTNLPRLRI----SNSAPVTPPLSSPTSRGPKRKTDWESISNGTLSSFRHP 825
            R+PTW                    F+GLR  GN++LPKHCDNNEVLKALC EAGWIVE DGTTYRKG   P    EI GGSA  S C                               T  +G     ++P+L+++       AS  + LP        S SAPVTPPLSSPT+R P+  TDW+ ++N    S   P
Sbjct:    6 RMPTWRERENNKRRERRRRAIAAKIFTGLRMYGNYELPKHCDNNEVLKALCNEAGWIVEPDGTTYRKGCSRPVERMEIGGGSATASPCSSYQPSPCASYNPSPGSSNFMSPASSSFANLTSGDGQS---LIPWLKHLSTTSSSSASSSSRLPNYLYIPGGSISAPVTPPLSSPTARTPRMNTDWQQLNNSFFVSSTPP 200          
BLAST of CK932855 vs. ExPASy Swiss-Prot
Match: BEH3_ARATH (BES1/BZR1 homolog protein 3 OS=Arabidopsis thaliana GN=BEH3 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.197e-21
Identity = 66/166 (39.76%), Postives = 81/166 (48.80%), Query Frame = 1
Query:  265 RLPTWXXXXXXXXXXXXXXXXXXXXFSGLRAEGNFKLPKHCDNNEVLKALCAEAGWIVEEDGTTYRKGSRPPRTPSEITGGSANISTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRFEGNPSNYILPFLQNIAS-VPTNLPRLR-ISNSAPVTPPLS-SPT 753
            R PTW                    F+GLR  GNFKLPKHCDNNEVLKALC EAGW VE+DGTTYRKG + P    ++  GS + S C                                      +N ++P+L+N++S  P+ LP     S SAPVTPPL+ SPT
Sbjct:    6 RTPTWKERENNKRRERRRRAIAAKIFAGLRIHGNFKLPKHCDNNEVLKALCNEAGWTVEDDGTTYRKGCK-PMDRMDLMNGSTSASPCSSYQHSPRASYNPSPSSSSFPSPTNPF---------GDANSLIPWLKNLSSNSPSKLPFFHGNSISAPVTPPLARSPT 161          
The following BLAST results are available for this feature:
BLAST of CK932855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
BEH2_ARATH1.861e-4552.31BES1/BZR1 homolog protein 2 OS=Arabidopsis thalian... [more]
BZR1_ARATH8.667e-3541.29Protein BRASSINAZOLE-RESISTANT 1 OS=Arabidopsis th... [more]
BZR2_ARATH4.301e-3441.58Protein BRASSINAZOLE-RESISTANT 2 OS=Arabidopsis th... [more]
BEH1_ARATH7.593e-3144.15BES1/BZR1 homolog protein 1 OS=Arabidopsis thalian... [more]
BEH4_ARATH9.281e-2939.39BES1/BZR1 homolog protein 4 OS=Arabidopsis thalian... [more]
BEH3_ARATH3.197e-2139.76BES1/BZR1 homolog protein 3 OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004350_F10 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IVF_F10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932855 ID=CK932855; Name=CK932855; organism=Citrus sinensis; type=EST; length=841bp
GGGGAATGGAACAAGCAATAACAGACTTGAACAAACATAACATGACCGAC
TGACTCCTCTACAAAACTTAAAATAAACGAAGCTGAAAGCTGGAAGCTTT
GGGTTCGTGAGTAGAGACTGGAGATAGAGAGTTAAAAGTCTTTTCATTTT
CTGTCTCTCGATTCTCTCAAGTGCAAACCAAGTTCACAGCTAGATCGAAT
TAATTTTTTTTTAAAAAAAGAGAGAGACGCATCTGGAGCAATGACAGCGG
GAGGCTCATCAGGGAGGCTGCCGACGTGGAAGGAGAGAGAGAACAACAAG
AGGAGGGAGAGAAGGAGAAGAGCCATAGCCGCTAAGATATTTTCTGGGCT
TAGAGCTGAGGGCAACTTTAAACTACCAAAACATTGTGACAATAACGAGG
TTTTGAAAGCCCTCTGTGCTGAGGCTGGCTGGATCGTTGAAGAAGATGGT
ACCACTTATCGCAAGGGAAGCAGGCCACCACGAACCCCATCTGAAATTAC
AGGCGGTTCAGCAAACATCAGTACATGTTCCTCTGTTCAACCAAGCCCTC
AATCCTCAGCTTTCCCCAGTCCTGTGCCCTCTTATCAGGCCAGCCCAACT
TCATCCTCATTTCCAAGTCCCACTCGTTTCGAGGGAAATCCCTCAAATTA
CATTCTCCCGTTCCTTCAAAACATTGCTTCAGTTCCTACAAATTTACCTC
GTCTTAGAATATCCAATAGTGCTCCAGTAACCCCACCTCTTTCATCTCCA
ACTTCTAGAGGTCCAAAACGAAAGACTGATTGGGAATCCATTTCAAATGG
CACCTTGAGCTCATTTCGCCATCCCCTGTTTGCGGTATCTG
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