CK932862
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932862 vs. ExPASy Swiss-Prot
Match: IF2M_SCHPO (Translation initiation factor IF-2, mitochondrial OS=Schizosaccharomyces pombe GN=SPBC1271.15c PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.078e-18 Identity = 46/131 (35.11%), Postives = 77/131 (58.78%), Query Frame = 2 Query: 5 LMHSIIYHLLDDFGNLVVDKAPGTFETQVAGEAEVLNIFELKGRSKAKGDDVKIAGCRVIDGCFTRSSTMRLLRSGEVVFEGSCISLKREKQDVDTVAKGNECGLVIRDWHDFQVGDIIQCLEQVLVKPKF 397 L H++IYHL+DD L + P +V GEA + IF++K AK V +AGCRV +G +S +RL+R+ ++++ G SLK K++V ++ KG ECG++++++ + GD +Q + P F Sbjct: 560 LFHNVIYHLMDDVRKLFALRLPPILVQRVTGEAIISAIFDIK----AKRAVVHVAGCRVTNGTIEKSHKIRLVRNDKIIWSGEIDSLKHLKEEVTSIKKGRECGILLKNFDEIVTGDKLQTFVEEYKPPDF 686
BLAST of CK932862 vs. ExPASy Swiss-Prot
Match: IF2_SULDN (Translation initiation factor IF-2 OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=infB PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.643e-17 Identity = 49/123 (39.84%), Postives = 68/123 (55.28%), Query Frame = 2 Query: 11 HSIIYHLLDDFGNLVVDKAPGTFETQVAGEAEVLNIFELKGRSKAKGDDVKIAGCRVIDGCFTRSSTMRLLRSGEVVFEGSCISLKREKQDVDTVAKGNECGLVIRDWHDFQVGDIIQCLEQV 379 +SIIY LLDD +++ F G+AEV N F K +AGC V+DG R +R++R G VV EG SLKR K DVD + G ECG++I+ + D VGD+I+ ++V Sbjct: 754 YSIIYQLLDDMTGMLMGMMAPKFSEINTGQAEVRNTF--------KAPKGMVAGCVVVDGKLIRGGLVRVIRDGVVVHEGELTSLKRFKDDVDEIGNGYECGVMIKGYDDVIVGDVIETFKKV 868
BLAST of CK932862 vs. ExPASy Swiss-Prot
Match: IF2_METPB (Translation initiation factor IF-2 OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=infB PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.643e-17 Identity = 50/126 (39.68%), Postives = 71/126 (56.35%), Query Frame = 2 Query: 11 HSIIYHLLDDFGNLVVDKAPGTFETQVAGEAEVLNIFELKGRSKAKGDDVKIAGCRVIDGCFTRSSTMRLLRSGEVVFEGSCISLKREKQDVDTVAKGNECGLVIRDWHDFQVGDIIQCLEQVLVK 388 +SIIY L+DD + P T + GEA++L IF++ SK KIAGCRV++G R + +RLLR+ V+ EG LKR K D V G ECG+ +++ D +VGD I+C +K Sbjct: 869 YSIIYDLVDDIKATLSGMLPPTLREERLGEAQILQIFDV---SKVG----KIAGCRVMEGVVQRGAHVRLLRNDVVIHEGKLAQLKRLKDDAKEVTAGYECGMSFQNYQDMRVGDFIECFNVEEIK 987
BLAST of CK932862 vs. ExPASy Swiss-Prot
Match: IF2_STAAW (Translation initiation factor IF-2 OS=Staphylococcus aureus (strain MW2) GN=infB PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.452e-17 Identity = 48/127 (37.80%), Postives = 76/127 (59.84%), Query Frame = 2 Query: 8 MHSIIYHLLDDFGNLVVDKAPGTFETQVAGEAEVLNIFELKGRSKAKGDDVKIAGCRVIDGCFTRSSTMRLLRSGEVVFEGSCISLKREKQDVDTVAKGNECGLVIRDWHDFQVGDIIQCLEQVLVK 388 +H +IY+++++ + + FE QV G+AEV F++ SK IAGC V +G TR++ +R++R G V +EG +LKR K D VAKG ECG+ I +++D + GD+I+ E V +K Sbjct: 585 LHRVIYNVIEEIESAMKGLLDPEFEEQVIGQAEVRQTFKV---SKVG----TIAGCYVTEGKITRNAGVRIIRDGIVQYEGELDTLKRFKDDAKEVAKGYECGITIENYNDLKEGDVIEAFEMVEIK 704
BLAST of CK932862 vs. ExPASy Swiss-Prot
Match: IF2_STAAT (Translation initiation factor IF-2 OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=infB PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.452e-17 Identity = 48/127 (37.80%), Postives = 76/127 (59.84%), Query Frame = 2 Query: 8 MHSIIYHLLDDFGNLVVDKAPGTFETQVAGEAEVLNIFELKGRSKAKGDDVKIAGCRVIDGCFTRSSTMRLLRSGEVVFEGSCISLKREKQDVDTVAKGNECGLVIRDWHDFQVGDIIQCLEQVLVK 388 +H +IY+++++ + + FE QV G+AEV F++ SK IAGC V +G TR++ +R++R G V +EG +LKR K D VAKG ECG+ I +++D + GD+I+ E V +K Sbjct: 585 LHRVIYNVIEEIESAMKGLLDPEFEEQVIGQAEVRQTFKV---SKVG----TIAGCYVTEGKITRNAGVRIIRDGIVQYEGELDTLKRFKDDAKEVAKGYECGITIENYNDLKEGDVIEAFEMVEIK 704
BLAST of CK932862 vs. ExPASy Swiss-Prot
Match: IF2_STAAS (Translation initiation factor IF-2 OS=Staphylococcus aureus (strain MSSA476) GN=infB PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.452e-17 Identity = 48/127 (37.80%), Postives = 76/127 (59.84%), Query Frame = 2 Query: 8 MHSIIYHLLDDFGNLVVDKAPGTFETQVAGEAEVLNIFELKGRSKAKGDDVKIAGCRVIDGCFTRSSTMRLLRSGEVVFEGSCISLKREKQDVDTVAKGNECGLVIRDWHDFQVGDIIQCLEQVLVK 388 +H +IY+++++ + + FE QV G+AEV F++ SK IAGC V +G TR++ +R++R G V +EG +LKR K D VAKG ECG+ I +++D + GD+I+ E V +K Sbjct: 585 LHRVIYNVIEEIESAMKGLLDPEFEEQVIGQAEVRQTFKV---SKVG----TIAGCYVTEGKITRNAGVRIIRDGIVQYEGELDTLKRFKDDAKEVAKGYECGITIENYNDLKEGDVIEAFEMVEIK 704
BLAST of CK932862 vs. ExPASy Swiss-Prot
Match: IF2_STAAR (Translation initiation factor IF-2 OS=Staphylococcus aureus (strain MRSA252) GN=infB PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.452e-17 Identity = 48/127 (37.80%), Postives = 76/127 (59.84%), Query Frame = 2 Query: 8 MHSIIYHLLDDFGNLVVDKAPGTFETQVAGEAEVLNIFELKGRSKAKGDDVKIAGCRVIDGCFTRSSTMRLLRSGEVVFEGSCISLKREKQDVDTVAKGNECGLVIRDWHDFQVGDIIQCLEQVLVK 388 +H +IY+++++ + + FE QV G+AEV F++ SK IAGC V +G TR++ +R++R G V +EG +LKR K D VAKG ECG+ I +++D + GD+I+ E V +K Sbjct: 585 LHRVIYNVIEEIESAMKGLLDPEFEEQVIGQAEVRQTFKV---SKVG----TIAGCYVTEGKITRNAGVRIIRDGIVQYEGELDTLKRFKDDAKEVAKGYECGITIENYNDLKEGDVIEAFEMVEIK 704
BLAST of CK932862 vs. ExPASy Swiss-Prot
Match: IF2_STAAN (Translation initiation factor IF-2 OS=Staphylococcus aureus (strain N315) GN=infB PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.452e-17 Identity = 48/127 (37.80%), Postives = 76/127 (59.84%), Query Frame = 2 Query: 8 MHSIIYHLLDDFGNLVVDKAPGTFETQVAGEAEVLNIFELKGRSKAKGDDVKIAGCRVIDGCFTRSSTMRLLRSGEVVFEGSCISLKREKQDVDTVAKGNECGLVIRDWHDFQVGDIIQCLEQVLVK 388 +H +IY+++++ + + FE QV G+AEV F++ SK IAGC V +G TR++ +R++R G V +EG +LKR K D VAKG ECG+ I +++D + GD+I+ E V +K Sbjct: 585 LHRVIYNVIEEIESAMKGLLDPEFEEQVIGQAEVRQTFKV---SKVG----TIAGCYVTEGKITRNAGVRIIRDGIVQYEGELDTLKRFKDDAKEVAKGYECGITIENYNDLKEGDVIEAFEMVEIK 704
BLAST of CK932862 vs. ExPASy Swiss-Prot
Match: IF2_STAAM (Translation initiation factor IF-2 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=infB PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.452e-17 Identity = 48/127 (37.80%), Postives = 76/127 (59.84%), Query Frame = 2 Query: 8 MHSIIYHLLDDFGNLVVDKAPGTFETQVAGEAEVLNIFELKGRSKAKGDDVKIAGCRVIDGCFTRSSTMRLLRSGEVVFEGSCISLKREKQDVDTVAKGNECGLVIRDWHDFQVGDIIQCLEQVLVK 388 +H +IY+++++ + + FE QV G+AEV F++ SK IAGC V +G TR++ +R++R G V +EG +LKR K D VAKG ECG+ I +++D + GD+I+ E V +K Sbjct: 585 LHRVIYNVIEEIESAMKGLLDPEFEEQVIGQAEVRQTFKV---SKVG----TIAGCYVTEGKITRNAGVRIIRDGIVQYEGELDTLKRFKDDAKEVAKGYECGITIENYNDLKEGDVIEAFEMVEIK 704
BLAST of CK932862 vs. ExPASy Swiss-Prot
Match: IF2_STAAE (Translation initiation factor IF-2 OS=Staphylococcus aureus (strain Newman) GN=infB PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.452e-17 Identity = 48/127 (37.80%), Postives = 76/127 (59.84%), Query Frame = 2 Query: 8 MHSIIYHLLDDFGNLVVDKAPGTFETQVAGEAEVLNIFELKGRSKAKGDDVKIAGCRVIDGCFTRSSTMRLLRSGEVVFEGSCISLKREKQDVDTVAKGNECGLVIRDWHDFQVGDIIQCLEQVLVK 388 +H +IY+++++ + + FE QV G+AEV F++ SK IAGC V +G TR++ +R++R G V +EG +LKR K D VAKG ECG+ I +++D + GD+I+ E V +K Sbjct: 585 LHRVIYNVIEEIESAMKGLLDPEFEEQVIGQAEVRQTFKV---SKVG----TIAGCYVTEGKITRNAGVRIIRDGIVQYEGELDTLKRFKDDAKEVAKGYECGITIENYNDLKEGDVIEAFEMVEIK 704 The following BLAST results are available for this feature:
BLAST of CK932862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK932862 ID=CK932862; Name=CK932862; organism=Citrus sinensis; type=EST; length=693bpback to top |