CK932864

Overview
NameCK932864
Unique NameCK932864
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length769
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2031 contig Csv1_Contig2031:475..1242. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK932864 vs. ExPASy Swiss-Prot
Match: UCHL3_BOVIN (Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Bos taurus GN=UCHL3 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.366e-44
Identity = 95/193 (49.22%), Postives = 130/193 (67.36%), Query Frame = 3
Query:   84 KRWLPLEANPDVMNQFLCGLGLPAEEAECYDVYGLDDELLAMVPQPVLAVLFLYPLTAQ-----SEEERRLQDNDKKEFSKNVYFMKQTVGNACGTIGLLHAVGNVTSEIKFQADSFFDKFYKSTANLDPQERAAFLENDKEMEVAHSVAASAGDTEA---TDDVNDHFICFTCVDGELYELDGRKSGPISHG 638
            +RWLPLEANP+V NQFL  LGL     +  DVYG+D ELL+MVP+PV AVL L+P+T +     +EEE +++   + + + +VYFMKQT+ NACGTIGL+HA+ N   ++ F++ S   KF + +A++ P+ERA +LEN   + V H  +A  G TEA    + V+ HFI    VDG LYELDGRK  PI+HG
Sbjct:    4 QRWLPLEANPEVTNQFLKQLGLHPNW-QFVDVYGMDPELLSMVPRPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQ-DVTSSVYFMKQTISNACGTIGLIHAIANNKDKMHFESGSTLKKFLEESASMSPEERARYLENYDAIRVTHETSAHEGQTEAPNIDEKVDLHFIALVHVDGHLYELDGRKPFPINHG 194          
BLAST of CK932864 vs. ExPASy Swiss-Prot
Match: UCHL3_HUMAN (Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Homo sapiens GN=UCHL3 PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.975e-44
Identity = 94/193 (48.70%), Postives = 129/193 (66.84%), Query Frame = 3
Query:   84 KRWLPLEANPDVMNQFLCGLGLPAEEAECYDVYGLDDELLAMVPQPVLAVLFLYPLTAQ-----SEEERRLQDNDKKEFSKNVYFMKQTVGNACGTIGLLHAVGNVTSEIKFQADSFFDKFYKSTANLDPQERAAFLENDKEMEVAHSVAASAGDTEA---TDDVNDHFICFTCVDGELYELDGRKSGPISHG 638
            +RWLPLEANP+V NQFL  LGL     +  DVYG+D ELL+MVP+PV AVL L+P+T +     +EEE +++   + + + +VYFMKQT+ NACGTIGL+HA+ N   ++ F++ S   KF + + ++ P+ERA +LEN   + V H  +A  G TEA    + V+ HFI    VDG LYELDGRK  PI+HG
Sbjct:    4 QRWLPLEANPEVTNQFLKQLGLHPNW-QFVDVYGMDPELLSMVPRPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQ-DVTSSVYFMKQTISNACGTIGLIHAIANNKDKMHFESGSTLKKFLEESVSMSPEERARYLENYDAIRVTHETSAHEGQTEAPSIDEKVDLHFIALVHVDGHLYELDGRKPFPINHG 194          
BLAST of CK932864 vs. ExPASy Swiss-Prot
Match: UCHL3_MOUSE (Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Mus musculus GN=Uchl3 PE=1 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 5.192e-44
Identity = 94/193 (48.70%), Postives = 129/193 (66.84%), Query Frame = 3
Query:   84 KRWLPLEANPDVMNQFLCGLGLPAEEAECYDVYGLDDELLAMVPQPVLAVLFLYPLTAQ-----SEEERRLQDNDKKEFSKNVYFMKQTVGNACGTIGLLHAVGNVTSEIKFQADSFFDKFYKSTANLDPQERAAFLENDKEMEVAHSVAASAGDTEA---TDDVNDHFICFTCVDGELYELDGRKSGPISHG 638
            +RWLPLEANP+V NQFL  LGL     +  DVYG++ ELL+MVP+PV AVL L+P+T +     +EEE +++   + + + +VYFMKQT+ NACGTIGL+HA+ N   ++ F++ S   KF + + ++ P+ERA FLEN   + V H  +A  G TEA    + V+ HFI    VDG LYELDGRK  PI+HG
Sbjct:    4 QRWLPLEANPEVTNQFLKQLGLHPNW-QFVDVYGMEPELLSMVPRPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQ-DVTSSVYFMKQTISNACGTIGLIHAIANNKDKMHFESGSTLKKFLEESVSMSPEERAKFLENYDAIRVTHETSAHEGQTEAPSIDEKVDLHFIALVHVDGHLYELDGRKPFPINHG 194          
BLAST of CK932864 vs. ExPASy Swiss-Prot
Match: UCHL3_PIG (Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Sus scrofa GN=UCHL3 PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.157e-43
Identity = 94/193 (48.70%), Postives = 130/193 (67.36%), Query Frame = 3
Query:   84 KRWLPLEANPDVMNQFLCGLGLPAEEAECYDVYGLDDELLAMVPQPVLAVLFLYPLTAQ-----SEEERRLQDNDKKEFSKNVYFMKQTVGNACGTIGLLHAVGNVTSEIKFQADSFFDKFYKSTANLDPQERAAFLENDKEMEVAHSVAASAGDTEA---TDDVNDHFICFTCVDGELYELDGRKSGPISHG 638
            +RWLPLEANP+V NQFL  LGL     +  DVYG+D ELL+MVP+PV AVL L+P+T +     +EEE +++   + + + +VYFMKQT+ NACGTIGL+HA+ N  +++ F++ S   KF + +A++ P ERA +LE+   + V H  +A  G TEA    + V+ HFI    VDG LYELDGRK  PI+HG
Sbjct:    4 QRWLPLEANPEVTNQFLKQLGLHPNW-QFVDVYGMDPELLSMVPRPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQ-DVTPSVYFMKQTISNACGTIGLIHAIANNKNKMHFESGSTLKKFLEESASMSPDERARYLESYDAIPVTHETSAHEGQTEAPNIDEKVDLHFIALVHVDGHLYELDGRKPFPINHG 194          
BLAST of CK932864 vs. ExPASy Swiss-Prot
Match: UCHL3_RAT (Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Rattus norvegicus GN=Uchl3 PE=1 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 7.497e-43
Identity = 93/193 (48.19%), Postives = 127/193 (65.80%), Query Frame = 3
Query:   84 KRWLPLEANPDVMNQFLCGLGLPAEEAECYDVYGLDDELLAMVPQPVLAVLFLYPLTAQ-----SEEERRLQDNDKKEFSKNVYFMKQTVGNACGTIGLLHAVGNVTSEIKFQADSFFDKFYKSTANLDPQERAAFLENDKEMEVAHSVAASAGDTEA---TDDVNDHFICFTCVDGELYELDGRKSGPISHG 638
            +RWLPLEANP+V NQFL  LGL     +  DVYG++ ELL+MVP+PV AVL L+P+T +     +EEE +++   + + + +VYFMKQT+ NACGTIGL+HA+ N   ++ F++ S   KF + +  + P+ERA  LEN   + V H  +A  G TEA    + V+ HFI    VDG LYELDGRK  PI+HG
Sbjct:    4 QRWLPLEANPEVTNQFLKQLGLHPNW-QFVDVYGMEPELLSMVPRPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQ-DVTSSVYFMKQTISNACGTIGLIHAIANNKDKMHFESGSALKKFLEESVAMSPEERARHLENYDAIRVTHETSAHEGQTEAPSIDEKVDLHFIALVHVDGHLYELDGRKPFPINHG 194          
BLAST of CK932864 vs. ExPASy Swiss-Prot
Match: UCHL4_MOUSE (Ubiquitin carboxyl-terminal hydrolase isozyme L4 OS=Mus musculus GN=Uchl4 PE=1 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.412e-41
Identity = 93/217 (42.86%), Postives = 134/217 (61.75%), Query Frame = 3
Query:   84 KRWLPLEANPDVMNQFLCGLGLPAEEAECYDVYGLDDELLAMVPQPVLAVLFLYPLTAQ-----SEEERRLQDNDKKEFSKNVYFMKQTVGNACGTIG---LLHAVGNVTSEIKFQADSFFDKFYKSTANLDPQERAAFLENDKEMEVAHSVAASAGDTEA---TDDVNDHFICFTCVDGELYELDGRKSGPISHGXXXXXXXXXXXXKVIKGMIQK 701
            +RWLPLEANP+V NQFL  LGL     +  DVYG++ ELL+++P+PV AVL L+P+T +     +EEE +++   + + + +VYFMKQT+ NACGTIG   L+HA+ N   ++ F++ S   KF + + ++ P+ERA +LEN   + V H  +A  G TEA    + V+ HFI    VDG LYELDG K  PI+HG            KV K  +++
Sbjct:    4 QRWLPLEANPEVTNQFLKQLGLHPNW-QFVDVYGMESELLSIIPRPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQ-DVTSSVYFMKQTISNACGTIGTIGLIHAIANNKDKVHFESGSTLKKFLEESVSMSPEERAKYLENYDAIRVTHETSAHEGQTEAPSIDEKVDLHFIALVHVDGHLYELDGWKPFPINHGKTSDETLLEDVIKVCKKFMER 218          
BLAST of CK932864 vs. ExPASy Swiss-Prot
Match: UCHL1_HORSE (Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS=Equus caballus GN=UCHL1 PE=2 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 1.323e-39
Identity = 84/183 (45.90%), Postives = 113/183 (61.75%), Query Frame = 3
Query:   96 PLEANPDVMNQFLCGLGLPAEEAECYDVYGLDDELLAMVPQPVLAVLFLYPLTAQSEEERRLQDNDKK--EFSKNVYFMKQTVGNACGTIGLLHAVGNVTSEIKFQADSFFDKFYKSTANLDPQERAAFLENDKEMEVAHSVAASAGDTEATDDVNDHFICFTCVDGELYELDGRKSGPISHG 638
            P+E NP+++N+ L  LG+ A +    DV GL++E L  VP P  A+L L+PLTAQ E  R+ Q  + K  E S  VYFMKQT+GN+CGTIGL+HAV N   +++F+  S   +F   T  L P++RA   E ++ ++ AH   A  G     D VN HFI F  VDG LYELDGR   P++HG
Sbjct:    5 PMEINPEMLNKVLARLGV-AGQWRFVDVLGLEEETLGSVPAPACALLLLFPLTAQHENFRKKQIEELKGQEVSPKVYFMKQTIGNSCGTIGLIHAVANNQDKLEFEDGSVLKQFLSETEKLSPEDRAKCFEKNEAIQAAHDAVAQEGQCRVDDKVNFHFILFNNVDGHLYELDGRMPFPVNHG 186          
BLAST of CK932864 vs. ExPASy Swiss-Prot
Match: UCHL1_RAT (Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS=Rattus norvegicus GN=Uchl1 PE=1 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 2.257e-39
Identity = 84/183 (45.90%), Postives = 113/183 (61.75%), Query Frame = 3
Query:   96 PLEANPDVMNQFLCGLGLPAEEAECYDVYGLDDELLAMVPQPVLAVLFLYPLTAQSEEERRLQDNDKK--EFSKNVYFMKQTVGNACGTIGLLHAVGNVTSEIKFQADSFFDKFYKSTANLDPQERAAFLENDKEMEVAHSVAASAGDTEATDDVNDHFICFTCVDGELYELDGRKSGPISHG 638
            P+E NP+++N+ L  LG+ A +    DV GL++E L  VP P  A+L L+PLTAQ E  R+ Q  + K  E S  VYFMKQT+GN+CGTIGL+HAV N   +++F+  S   +F   T  L P++RA   E ++ ++ AH   A  G     D VN HFI F  VDG LYELDGR   P++HG
Sbjct:    5 PMEINPEMLNKVLAKLGV-AGQWRFADVLGLEEETLGSVPSPACALLLLFPLTAQHENFRKKQIEELKGQEVSPKVYFMKQTIGNSCGTIGLIHAVANNQDKLEFEDGSVLKQFLSETEKLSPEDRAKCFEKNEAIQAAHDSVAQEGQCRVDDKVNFHFILFNNVDGHLYELDGRMPFPVNHG 186          
BLAST of CK932864 vs. ExPASy Swiss-Prot
Match: UCHL1_MOUSE (Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS=Mus musculus GN=Uchl1 PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.257e-39
Identity = 84/183 (45.90%), Postives = 113/183 (61.75%), Query Frame = 3
Query:   96 PLEANPDVMNQFLCGLGLPAEEAECYDVYGLDDELLAMVPQPVLAVLFLYPLTAQSEEERRLQDNDKK--EFSKNVYFMKQTVGNACGTIGLLHAVGNVTSEIKFQADSFFDKFYKSTANLDPQERAAFLENDKEMEVAHSVAASAGDTEATDDVNDHFICFTCVDGELYELDGRKSGPISHG 638
            P+E NP+++N+ L  LG+ A +    DV GL++E L  VP P  A+L L+PLTAQ E  R+ Q  + K  E S  VYFMKQT+GN+CGTIGL+HAV N   +++F+  S   +F   T  L P++RA   E ++ ++ AH   A  G     D VN HFI F  VDG LYELDGR   P++HG
Sbjct:    5 PMEINPEMLNKVLAKLGV-AGQWRFADVLGLEEETLGSVPSPACALLLLFPLTAQHENFRKKQIEELKGQEVSPKVYFMKQTIGNSCGTIGLIHAVANNQDKLEFEDGSVLKQFLSETEKLSPEDRAKCFEKNEAIQAAHDSVAQEGQCRVDDKVNFHFILFNNVDGHLYELDGRMPFPVNHG 186          
BLAST of CK932864 vs. ExPASy Swiss-Prot
Match: UCHL_DICDI (Probable ubiquitin carboxyl-terminal hydrolase OS=Dictyostelium discoideum GN=uch1 PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.029e-39
Identity = 86/213 (40.38%), Postives = 128/213 (60.09%), Query Frame = 3
Query:   84 KRWLPLEANPDVMNQFLCGLGLPAEEAECYDVYGLDDELLAMVPQPVLAVLFLYPLTAQSEEERRLQDNDKKE----FSKNVYFMKQTVGNACGTIGLLHAVGNVTSEIKFQADSFFDKFYKSTANLDPQERAAFLENDKEMEVAHSVAASAGDT---EATDDVNDHFICFTCVDGELYELDGRKSGPISHGXXXXXXXXXXXXKVIKGMIQK 701
            K W+PLEANP+V+  F+  LG+  +   C D+YG+D+ LL MVP P +AV+ L+P+T + E++R   + + +E     S  VYFMKQ +GNACGTIG++H+V N  + I+F  + FF +F   T +L  +ERA  L  + E+E +H ++A  G +   +  + V  HF+ F  VDG LYELDGRK   I+HG             V++ MI +
Sbjct:   12 KNWIPLEANPEVLTTFMQSLGVSKDWEFC-DIYGIDEGLLEMVPSPCVAVILLFPITNEYEDKRYKLEKEIEEKGQVLSDKVYFMKQYIGNACGTIGVIHSVLNNANVIEFNENGFFKQFLDKTTSLSTEERAISLLKNSEIEKSHEISALQGQSNVPQEDEPVVLHFVSFVHVDGHLYELDGRKPFAINHGESSAETLLKDTANVLQKMIDE 223          
The following BLAST results are available for this feature:
BLAST of CK932864 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
UCHL3_BOVIN1.366e-4449.22Ubiquitin carboxyl-terminal hydrolase isozyme L3 O... [more]
UCHL3_HUMAN3.975e-4448.70Ubiquitin carboxyl-terminal hydrolase isozyme L3 O... [more]
UCHL3_MOUSE5.192e-4448.70Ubiquitin carboxyl-terminal hydrolase isozyme L3 O... [more]
UCHL3_PIG1.157e-4348.70Ubiquitin carboxyl-terminal hydrolase isozyme L3 O... [more]
UCHL3_RAT7.497e-4348.19Ubiquitin carboxyl-terminal hydrolase isozyme L3 O... [more]
UCHL4_MOUSE2.412e-4142.86Ubiquitin carboxyl-terminal hydrolase isozyme L4 O... [more]
UCHL1_HORSE1.323e-3945.90Ubiquitin carboxyl-terminal hydrolase isozyme L1 O... [more]
UCHL1_RAT2.257e-3945.90Ubiquitin carboxyl-terminal hydrolase isozyme L1 O... [more]
UCHL1_MOUSE2.257e-3945.90Ubiquitin carboxyl-terminal hydrolase isozyme L1 O... [more]
UCHL_DICDI5.029e-3940.38Probable ubiquitin carboxyl-terminal hydrolase OS=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004350_F02 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IVF_F02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932864 ID=CK932864; Name=CK932864; organism=Citrus sinensis; type=EST; length=769bp
GGGGATTATTTTTTACTTGGTGTTTCTTCTGATCTAGCTAAAGAGNNNNN
NAAATGGCAGCAGTAGACGAGCGTCCTTCAGCTAAGAGGTGGCTCCCTCT
TGAAGCTAATCCCGATGTCATGAACCAGTTCCTTTGTGGCCTCGGTCTTC
CAGCTGAGGAGGCTGAGTGCTATGATGTGTATGGCTTGGATGATGAGCTC
TTGGCAATGGTTCCGCAACCTGTTCTTGCCGTGCTGTTTCTTTATCCCTT
AACTGCACAGAGTGAAGAAGAAAGAAGGTTGCAGGACAATGACAAAAAGG
AATTTAGCAAGAATGTTTATTTCATGAAGCAAACTGTTGGAAATGCTTGT
GGAACAATTGGACTTCTTCATGCTGTTGGGAACGTCACTTCGGAAATCAA
GTTTCAAGCTGATTCATTCTTCGATAAATTTTACAAGTCCACAGCGAACT
TGGATCCACAAGAGCGTGCAGCATTTCTTGAGAATGATAAGGAAATGGAA
GTTGCTCATTCGGTAGCAGCTTCAGCTGGTGACACAGAGGCTACCGATGA
CGTGAATGATCATTTTATCTGCTTCACCTGTGTGGATGGGGAACTTTATG
AACTTGATGGAAGGAAGTCGGGGCCAATATCTCATGGTGCTTCGTCTCCA
AGCAGCTTATTGTTGGATGCAGCTAAAGTGATAAAGGGCATGATCCAGAA
AAAATCCTGAATCNCTGAACTTCAATGTAATTGCCTTTTCGAAGAAAGCT
TGAGGTGCATTTTAATGTT
back to top